RNA–Protein interactions for RNA: ENST00000366998.4

NEK2-201, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-201ENST00000366998 GTF2E1P29083 439 aaPredicted RBP18.09■□□□□ 0.49
NEK2-201ENST00000366998 ANAPC15P60006 121 aa18.09■□□□□ 0.49
NEK2-201ENST00000366998 DDX46Q7L014 1031 aaKnown RBP18.09■□□□□ 0.49
NEK2-201ENST00000366998 AMIGO3Q86WK7 504 aa18.09■□□□□ 0.49
NEK2-201ENST00000366998 SEC31BQ9NQW1 1179 aa18.09■□□□□ 0.49
NEK2-201ENST00000366998 LRRC4BQ9NT99 713 aa18.09■□□□□ 0.49
NEK2-201ENST00000366998 COL24A1Q17RW2 1714 aa18.09■□□□□ 0.49
NEK2-201ENST00000366998 GOLIM4O00461 696 aa18.09■□□□□ 0.49
NEK2-201ENST00000366998 SETDB2Q96T68 719 aa18.09■□□□□ 0.49
NEK2-201ENST00000366998 MPHOSPH8Q99549 860 aa18.09■□□□□ 0.49
NEK2-201ENST00000366998 PAG1Q9NWQ8 432 aa18.09■□□□□ 0.49
NEK2-201ENST00000366998 A0A0D9SFI3 127 aa18.08■□□□□ 0.49
NEK2-201ENST00000366998 HSPA4P34932 840 aa18.08■□□□□ 0.49
NEK2-201ENST00000366998 RFC4P35249 363 aa18.08■□□□□ 0.49
NEK2-201ENST00000366998 TRAPPC3LQ5T215 181 aa18.08■□□□□ 0.49
NEK2-201ENST00000366998 RFX7Q2KHR2 1363 aa18.08■□□□□ 0.48
NEK2-201ENST00000366998 RTL9Q8NET4 1388 aa18.08■□□□□ 0.48
NEK2-201ENST00000366998 HSP90AA1P07900 732 aaKnown RBP18.07■□□□□ 0.48
NEK2-201ENST00000366998 NYXQ9GZU5 481 aa18.07■□□□□ 0.48
NEK2-201ENST00000366998 MROH5Q6ZUA9 1318 aa18.07■□□□□ 0.48
NEK2-201ENST00000366998 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
NEK2-201ENST00000366998 PDE8BO95263 885 aa18.07■□□□□ 0.48
NEK2-201ENST00000366998 IGHMBP2P38935 993 aaKnown RBP18.07■□□□□ 0.48
NEK2-201ENST00000366998 PTH1RQ03431 593 aa18.07■□□□□ 0.48
NEK2-201ENST00000366998 VGLL2Q8N8G2 317 aa18.07■□□□□ 0.48
NEK2-201ENST00000366998 KBTBD3Q8NAB2 608 aa18.07■□□□□ 0.48
NEK2-201ENST00000366998 EP400Q96L91 3159 aa18.06■□□□□ 0.48
NEK2-201ENST00000366998 NBPF5PQ86XG9 351 aaPredicted RBP18.06■□□□□ 0.48
NEK2-201ENST00000366998 HELBQ8NG08 1087 aaPredicted RBP18.06■□□□□ 0.48
NEK2-201ENST00000366998 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.06■□□□□ 0.48
NEK2-201ENST00000366998 ANTXR1Q9H6X2 564 aa18.06■□□□□ 0.48
NEK2-201ENST00000366998 CCDC171Q6TFL3 1326 aa18.06■□□□□ 0.48
NEK2-201ENST00000366998 NEK4P51957 841 aa18.05■□□□□ 0.48
NEK2-201ENST00000366998 SLC27A3Q5K4L6 730 aa18.05■□□□□ 0.48
NEK2-201ENST00000366998 ARAP2Q8WZ64 1704 aa18.05■□□□□ 0.48
NEK2-201ENST00000366998 ABCC12Q96J65 1359 aa18.05■□□□□ 0.48
NEK2-201ENST00000366998 KCNJ4P48050 445 aa18.05■□□□□ 0.48
NEK2-201ENST00000366998 FKBP4Q02790 459 aaKnown RBP eCLIP18.05■□□□□ 0.48
NEK2-201ENST00000366998 CDC5LQ99459 802 aaKnown RBP18.05■□□□□ 0.48
NEK2-201ENST00000366998 MED23Q9ULK4 1368 aa18.05■□□□□ 0.48
NEK2-201ENST00000366998 TAF1P21675 1872 aa18.04■□□□□ 0.48
NEK2-201ENST00000366998 PUM3Q15397 648 aaKnown RBP18.04■□□□□ 0.48
NEK2-201ENST00000366998 SNRKQ9NRH2 765 aa18.04■□□□□ 0.48
NEK2-201ENST00000366998 NPHP1O15259 732 aa18.03■□□□□ 0.48
NEK2-201ENST00000366998 C3orf67Q6ZVT6 689 aa18.03■□□□□ 0.48
NEK2-201ENST00000366998 FOXD4L1Q9NU39 408 aa18.03■□□□□ 0.48
NEK2-201ENST00000366998 SNX14Q9Y5W7 946 aa18.03■□□□□ 0.48
NEK2-201ENST00000366998 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.03■□□□□ 0.48
NEK2-201ENST00000366998 ADRA2BP18089 450 aa18.03■□□□□ 0.48
NEK2-201ENST00000366998 SF3B3Q15393 1217 aaKnown RBP18.03■□□□□ 0.48
NEK2-201ENST00000366998 ZNF589Q86UQ0 364 aaPredicted RBP18.03■□□□□ 0.48
NEK2-201ENST00000366998 IL17RAQ96F46 866 aa18.03■□□□□ 0.48
NEK2-201ENST00000366998 MYH7P12883 1935 aa18.02■□□□□ 0.48
NEK2-201ENST00000366998 AKAP11Q9UKA4 1901 aa18.02■□□□□ 0.48
NEK2-201ENST00000366998 CHGBP05060 677 aa18.02■□□□□ 0.48
NEK2-201ENST00000366998 SLC5A1P13866 664 aa18.02■□□□□ 0.48
NEK2-201ENST00000366998 SCARF1Q14162 830 aa18.02■□□□□ 0.48
NEK2-201ENST00000366998 SLC10A5Q5PT55 438 aa18.02■□□□□ 0.48
NEK2-201ENST00000366998 PRPF40BQ6NWY9 871 aaKnown RBP18.02■□□□□ 0.48
NEK2-201ENST00000366998 TPTE2Q6XPS3 522 aa18.02■□□□□ 0.48
NEK2-201ENST00000366998 LPIN2Q92539 896 aa18.02■□□□□ 0.48
NEK2-201ENST00000366998 RBM8AQ9Y5S9 174 aaKnown RBP18.02■□□□□ 0.48
NEK2-201ENST00000366998 COL4A1P02462 1669 aa18.02■□□□□ 0.47
NEK2-201ENST00000366998 TAF5LO75529 589 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 ANKRD18AQ8IVF6 992 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 UPF3BQ9BZI7 483 aaKnown RBP18.01■□□□□ 0.47
NEK2-201ENST00000366998 CHMP5Q9NZZ3 219 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 FGFR2P21802 821 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 RXRBP28702 533 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 ZAP70P43403 619 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 MCMDC2Q4G0Z9 681 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 RASEFQ8IZ41 740 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 CCDC24Q8N4L8 307 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 MAP4K1Q92918 833 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 NLRP3Q96P20 1036 aa18.01■□□□□ 0.47
NEK2-201ENST00000366998 SEC62Q99442 399 aaKnown RBP18.01■□□□□ 0.47
NEK2-201ENST00000366998 A0A1B0GUL6 1792 aa18■□□□□ 0.47
NEK2-201ENST00000366998 CARMIL3Q8ND23 1372 aa18■□□□□ 0.47
NEK2-201ENST00000366998 TXNRD1Q16881 649 aa18■□□□□ 0.47
NEK2-201ENST00000366998 CCDC129Q6ZRS4 1044 aa18■□□□□ 0.47
NEK2-201ENST00000366998 MCAMP43121 646 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 PHKA1P46020 1223 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 CHRNDQ07001 517 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 NFKBIBQ15653 356 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 LRRFIP1Q32MZ4 808 aaKnown RBP17.99■□□□□ 0.47
NEK2-201ENST00000366998 PI16Q6UXB8 463 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 TICAM2Q86XR7 235 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 SNAP23O00161 211 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 RNF113AO15541 343 aaKnown RBP17.99■□□□□ 0.47
NEK2-201ENST00000366998 ZKSCAN1P17029 563 aaPredicted RBP17.99■□□□□ 0.47
NEK2-201ENST00000366998 SSFA2P28290 1259 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 MCM2P49736 904 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 NFIXQ14938 502 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 NECTIN1Q15223 517 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 CREB3L3Q68CJ9 461 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 CCDC102BQ68D86 513 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 HELLSQ9NRZ9 838 aa17.99■□□□□ 0.47
NEK2-201ENST00000366998 UQCRFS1P1P0C7P4 283 aa17.98■□□□□ 0.47
NEK2-201ENST00000366998 SLFNL1Q499Z3 407 aa17.98■□□□□ 0.47
NEK2-201ENST00000366998 ZMYM1Q5SVZ6 1142 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms