RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 TDRD12Q587J7 1177 aaKnown RBP12.54□□□□□ -0.4
CDC42BPA-205ENST00000366769 CARD6Q9BX69 1037 aa12.54□□□□□ -0.4
CDC42BPA-205ENST00000366769 VPS41P49754 854 aa12.54□□□□□ -0.4
CDC42BPA-205ENST00000366769 ATP1A2P50993 1020 aa12.54□□□□□ -0.4
CDC42BPA-205ENST00000366769 STMN2Q93045 179 aa12.54□□□□□ -0.4
CDC42BPA-205ENST00000366769 SYNCQ9H7C4 482 aa12.54□□□□□ -0.4
CDC42BPA-205ENST00000366769 USP16Q9Y5T5 823 aa12.54□□□□□ -0.4
CDC42BPA-205ENST00000366769 COG7P83436 770 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 MINDY4BA8MYZ0 360 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 VIMP08670 466 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 LRRC9Q6ZRR7 1453 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 EP400NLQ6ZTU2 488 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 ABCF2Q9UG63 623 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 TMX3Q96JJ7 454 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 TOP2AP11388 1531 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 CETN3O15182 167 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 GADD45BO75293 160 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 IDH1O75874 414 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 GYS2P54840 703 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 IFT74Q96LB3 600 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 LUC7L3O95232 432 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 ERCC3P19447 782 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 ARMCX6Q7L4S7 300 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 NEDD9Q14511 834 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 SH2D4BQ5SQS7 431 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 SREK1Q8WXA9 508 aaKnown RBP12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 CEP131Q9UPN4 1083 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 SAMM50Q9Y512 469 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 MUM1Q2TAK8 710 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 UBLCP1Q8WVY7 318 aaPredicted RBP12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
CDC42BPA-205ENST00000366769 PRC1O43663 620 aa12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 NOL3O60936 208 aaKnown RBP12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 CLTAP09496 248 aa12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 CABP4P57796 275 aa12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 SNX21Q969T3 373 aa12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 CIB2O75838 187 aa12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 ZBTB16Q05516 673 aa12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 RASEFQ8IZ41 740 aa12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 GGNBP2Q9H3C7 697 aa12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 MMRN2Q9H8L6 949 aa12.52□□□□□ -0.4
CDC42BPA-205ENST00000366769 SLC8A1P32418 973 aa12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 EFCAB13Q8IY85 973 aa12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 ZNF445P59923 1031 aa12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 ARMC9Q7Z3E5 817 aa12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 CCDC170Q8IYT3 715 aa12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 CABP2Q9NPB3 220 aa12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 EIF4E1BA6NMX2 242 aaKnown RBP12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 ANAPC4Q9UJX5 808 aa12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 VIRMAQ69YN4 1812 aaKnown RBP12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 FGFR1OPO95684 399 aaKnown RBP12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 CXorf56Q9H5V9 222 aa12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
CDC42BPA-205ENST00000366769 MYO1BO43795 1136 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 CCDC92Q53HC0 331 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 CWC25Q9NXE8 425 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 MYH8P13535 1937 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 FBXO38Q6PIJ6 1188 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 SYCP3Q8IZU3 236 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 MTIF2P46199 727 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 TCERG1LQ5VWI1 586 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 CCDC82Q8N4S0 544 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 LRMPQ12912 555 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 CCDC144CPQ8IYA2 1237 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 PPP1R9BQ96SB3 815 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 ZSCAN25Q6NSZ9 544 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 TSPYL2Q9H2G4 693 aaPredicted RBP12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 STAG1Q8WVM7 1258 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 GEMIN8Q9NWZ8 242 aaKnown RBP12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 NCOA1Q15788 1441 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 MAP7Q14244 749 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 IQCA1Q86XH1 822 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 VCXQ9H320 206 aa12.51□□□□□ -0.41
CDC42BPA-205ENST00000366769 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 KIAA1524Q8TCG1 905 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 ANKRD65E5RJM6 399 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 ERBINQ96RT1 1412 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 CACNA2D3Q8IZS8 1091 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 MKNK2Q9HBH9 465 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 SCAPERQ9BY12 1400 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 ACTN2P35609 894 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 MAP7D1Q3KQU3 841 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 SPG7Q9UQ90 795 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 MAP3K9P80192 1104 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 STIM2Q9P246 746 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 ANKRD36BQ8N2N9 1353 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 MAPKBP1O60336 1514 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 SATB1Q01826 763 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 NCBP1Q09161 790 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 PLEKHO1Q53GL0 409 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 WASF1Q92558 559 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 FERMT1Q9BQL6 677 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 TTC22Q5TAA0 569 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 GSDMBQ8TAX9 411 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 TIAM1Q13009 1591 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 INTS8Q75QN2 995 aaKnown RBP12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 CUL5Q93034 780 aa12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 ZNF219Q9P2Y4 722 aaPredicted RBP12.5□□□□□ -0.41
CDC42BPA-205ENST00000366769 MYO18AQ92614 2054 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms