RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PYM1Q9BRP8 204 aaKnown RBP6.21□□□□□ -1.42
CDC42BPA-204ENST00000366767 RNF41Q9H4P4 317 aaPredicted RBP6.21□□□□□ -1.42
CDC42BPA-204ENST00000366767 MROH2AA6NES4 1674 aa6.21□□□□□ -1.42
CDC42BPA-204ENST00000366767 KANK3Q6NY19 840 aa6.21□□□□□ -1.42
CDC42BPA-204ENST00000366767 ZNF500O60304 480 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 SERPINC1P01008 464 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 ZNF165P49910 485 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 MAP3K12Q12852 859 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 FERMT3Q86UX7 667 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 UBXN4Q92575 508 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 BICC1Q9H694 974 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 SLC27A2O14975 620 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 HMGB2P26583 209 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 CEBPZQ03701 1054 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 TMTC2Q8N394 836 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 AIDAQ96BJ3 306 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 SLC52A2Q9HAB3 445 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 MNAT1P51948 309 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 PTPN14Q15678 1187 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 PXDNLA1KZ92 1463 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 OVOS2A0A0J9YW53 1432 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 OVOS2Q6IE36 1432 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 GOLIM4O00461 696 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 DNM1Q05193 864 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 NBPF6Q5VWK0 638 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 CTR9Q6PD62 1173 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 LMBR1LQ6UX01 489 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 UBE3BQ7Z3V4 1068 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 FILIP1Q7Z7B0 1213 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 CCAR1Q8IX12 1150 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 LRRC59Q96AG4 307 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 NBPF4Q96M43 638 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 GPR108Q9NPR9 543 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 ZSCAN12O43309 604 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 GIGYF1O75420 1035 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 NBPF7P0C2Y1 421 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 ATP5JP18859 108 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 POLA2Q14181 598 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 CCDC150Q8NCX0 1101 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 MPHOSPH8Q99549 860 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 GOLGA6L9A6NEM1 432 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 HCLS1P14317 486 aaPredicted RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 IGHMBP2P38935 993 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 FOSBP53539 338 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 Q6ZUG5 572 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 CLIP2Q9UDT6 1046 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 PA2G4Q9UQ80 394 aaKnown RBP6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 ANXA1P04083 346 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 TNNI3KQ59H18 835 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 GIMAP6Q6P9H5 292 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 TRIM34Q9BYJ4 488 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 GBP3Q9H0R5 595 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 FBXO3Q9UK99 471 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 FPGT-TNNI3KV9GXZ4 949 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 SPATA31D1Q6ZQQ2 1576 aa6.2□□□□□ -1.42
CDC42BPA-204ENST00000366767 RNF113AO15541 343 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 SLC5A1P13866 664 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 LGR6Q9HBX8 967 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 PREX1Q8TCU6 1659 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 NECAB1Q8N987 351 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 BRF1Q92994 677 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 DSCC1Q9BVC3 393 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 DACT1Q9NYF0 836 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 ZNF652Q9Y2D9 606 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 CAMK4Q16566 473 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 CWF19L2Q2TBE0 894 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 KIF18AQ8NI77 898 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 PAG1Q9NWQ8 432 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 CCDC91Q7Z6B0 441 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 FSIP1Q8NA03 581 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 CNNM2Q9H8M5 875 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 TFIP11Q9UBB9 837 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 ERLIN2O94905 339 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 MTX1Q13505 466 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 TTC31Q49AM3 519 aaPredicted RBP6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 LSG1Q9H089 658 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 CRB1P82279 1406 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 NCOA3Q9Y6Q9 1424 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 SSRP1Q08945 709 aaKnown RBP6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 BRAPQ7Z569 592 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 TMEM63CQ9P1W3 806 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 ODF2Q5BJF6 829 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 LDHAL6AQ6ZMR3 332 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 SUCLG2Q96I99 432 aa6.19□□□□□ -1.42
CDC42BPA-204ENST00000366767 ARHGEF28Q8N1W1 1705 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 GCKRQ14397 625 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 NAA16Q6N069 864 aaPredicted RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 KRT222Q8N1A0 295 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 NFATC2IPQ8NCF5 419 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 PCDH11XQ9BZA7 1347 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 PCDH11YQ9BZA8 1340 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 TMEM131LA2VDJ0 1609 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 TYRO3Q06418 890 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 KBTBD3Q8NAB2 608 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 UBAC1Q9BSL1 405 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 NAPBQ9H115 298 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 STRN4Q9NRL3 753 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 USP16Q9Y5T5 823 aa6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 BMS1Q14692 1282 aaKnown RBP6.18□□□□□ -1.42
CDC42BPA-204ENST00000366767 RNF187Q5TA31 235 aaPredicted RBP6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms