RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 ANTXR1Q9H6X2 564 aa13.55□□□□□ -0.24
CDC42BPA-202ENST00000366764 ZCCHC11Q5TAX3 1644 aaKnown RBP13.55□□□□□ -0.24
CDC42BPA-202ENST00000366764 ERO1AQ96HE7 468 aa13.55□□□□□ -0.24
CDC42BPA-202ENST00000366764 RGS12O14924 1447 aa13.55□□□□□ -0.24
CDC42BPA-202ENST00000366764 RAI14Q9P0K7 980 aa13.55□□□□□ -0.24
CDC42BPA-202ENST00000366764 RAD21O60216 631 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 HSPA4P34932 840 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 UQCRFS1P1P0C7P4 283 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 ZRSR2Q15696 482 aaKnown RBP13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 KLHL10Q6JEL2 608 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 TMEM67Q5HYA8 995 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 MFSD6Q6ZSS7 791 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 PRDM10Q9NQV6 1147 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 CDK12Q9NYV4 1490 aaPredicted RBP13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 TANGO6Q9C0B7 1094 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 AATKQ6ZMQ8 1374 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 ZFYVE16Q7Z3T8 1539 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 CTAGE9A4FU28 777 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 GOLGA1Q92805 767 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 LRRC27Q9C0I9 530 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 TMEM266Q2M3C6 531 aa13.54□□□□□ -0.24
CDC42BPA-202ENST00000366764 VIRMAQ69YN4 1812 aaKnown RBP13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 CAVIN4Q5BKX8 364 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 SMARCC1Q92922 1105 aaPredicted RBP13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 DNAJC25Q9H1X3 360 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 CLTCL1P53675 1640 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 Q6ZUG5 572 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 TMOD3Q9NYL9 352 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 CCDC194A0A1B0GVG4 234 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 CCDC178Q5BJE1 867 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 ZBTB43O43298 467 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 DMRT2Q9Y5R5 561 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 PDE4CQ08493 712 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 CTR9Q6PD62 1173 aa13.53□□□□□ -0.24
CDC42BPA-202ENST00000366764 NMIQ13287 307 aaPredicted RBP13.52□□□□□ -0.24
CDC42BPA-202ENST00000366764 C16orf71Q8IYS4 520 aaPredicted RBP13.52□□□□□ -0.24
CDC42BPA-202ENST00000366764 NECAB1Q8N987 351 aa13.52□□□□□ -0.24
CDC42BPA-202ENST00000366764 LUZP1Q86V48 1076 aa13.52□□□□□ -0.24
CDC42BPA-202ENST00000366764 ELP1O95163 1332 aa13.52□□□□□ -0.24
CDC42BPA-202ENST00000366764 DDX54Q8TDD1 881 aaKnown RBP13.52□□□□□ -0.25
CDC42BPA-202ENST00000366764 CLSTN2Q9H4D0 955 aa13.52□□□□□ -0.25
CDC42BPA-202ENST00000366764 INCENPQ9NQS7 918 aa13.52□□□□□ -0.25
CDC42BPA-202ENST00000366764 BIN1O00499 593 aa13.52□□□□□ -0.25
CDC42BPA-202ENST00000366764 TCP11L1Q9NUJ3 509 aa13.52□□□□□ -0.25
CDC42BPA-202ENST00000366764 AEBP2Q6ZN18 517 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPA-202ENST00000366764 MICU3Q86XE3 530 aa13.52□□□□□ -0.25
CDC42BPA-202ENST00000366764 PAG1Q9NWQ8 432 aa13.52□□□□□ -0.25
CDC42BPA-202ENST00000366764 NAA16Q6N069 864 aaPredicted RBP13.52□□□□□ -0.25
CDC42BPA-202ENST00000366764 GNAT2P19087 354 aa13.51□□□□□ -0.25
CDC42BPA-202ENST00000366764 AOPEPQ8N6M6 819 aa13.51□□□□□ -0.25
CDC42BPA-202ENST00000366764 FAM193AP78312 1265 aa13.51□□□□□ -0.25
CDC42BPA-202ENST00000366764 E9PCH4 1651 aa13.51□□□□□ -0.25
CDC42BPA-202ENST00000366764 KLF18A0A0U1RQI7 1052 aa13.51□□□□□ -0.25
CDC42BPA-202ENST00000366764 PTCH1Q13635 1447 aa13.51□□□□□ -0.25
CDC42BPA-202ENST00000366764 PTGS1P23219 599 aa13.51□□□□□ -0.25
CDC42BPA-202ENST00000366764 CNGA4Q8IV77 575 aa13.51□□□□□ -0.25
CDC42BPA-202ENST00000366764 ANKRD18AQ8IVF6 992 aa13.51□□□□□ -0.25
CDC42BPA-202ENST00000366764 RPS6KB1P23443 525 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 NUTM2AQ8IVF1 878 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 CENPHQ9H3R5 247 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 OSBPL3Q9H4L5 887 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 HELLSQ9NRZ9 838 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 MTHFSDQ2M296 383 aaKnown RBP13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 N4BP3O15049 544 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 IQGAP1P46940 1657 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 CACNA2D4Q7Z3S7 1137 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 RTL9Q8NET4 1388 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 CYLC1P35663 651 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 DNAI1Q9UI46 699 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 CTAGE15A4D2H0 777 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 CTAGE8P0CG41 777 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 CTAGE6Q86UF2 777 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 CTAGE4Q8IX94 777 aa13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 RNF17Q9BXT8 1623 aaKnown RBP13.5□□□□□ -0.25
CDC42BPA-202ENST00000366764 A6NNZ2 444 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 GUCY1B3Q02153 619 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 IFI16Q16666 785 aaKnown RBP13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 TUBB8Q3ZCM7 444 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 SLF2Q8IX21 1173 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 USHBP1Q8N6Y0 703 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 ALG1Q9BT22 464 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 MAP2P11137 1827 aaKnown RBP13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 POLR3GO15318 223 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 NBPF7P0C2Y1 421 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 POLR3DP05423 398 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 UBA7P41226 1012 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 ZNF75DP51815 510 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 PDE4BQ07343 736 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 IKQ13123 557 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 STRN4Q9NRL3 753 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 ZHX1Q9UKY1 873 aaPredicted RBP13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 GTF2F1P35269 517 aaKnown RBP eCLIP13.49□□□□□ -0.253e-27■■■■■ 35.2
CDC42BPA-202ENST00000366764 ESR2Q92731 530 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 WTAPQ15007 396 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 DDX46Q7L014 1031 aaKnown RBP13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 SIRT1Q96EB6 747 aa13.49□□□□□ -0.25
CDC42BPA-202ENST00000366764 RTN1Q16799 776 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 ARHGAP31Q2M1Z3 1444 aa13.48□□□□□ -0.25
CDC42BPA-202ENST00000366764 CALML3P27482 149 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms