RNA–Protein interactions for RNA: ENST00000366735.5

MRPL55-209, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL55, Length 1,212 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-209ENST00000366735 SAPCD2Q86UD0 394 aa16.03■□□□□ 0.16
MRPL55-209ENST00000366735 MICALL2Q8IY33 904 aa16.03■□□□□ 0.16
MRPL55-209ENST00000366735 GLIS2Q9BZE0 524 aaPredicted RBP16.03■□□□□ 0.16
MRPL55-209ENST00000366735 ZNF408Q9H9D4 720 aa16.03■□□□□ 0.16
MRPL55-209ENST00000366735 CNOT7Q9UIV1 285 aaKnown RBP16.03■□□□□ 0.16
MRPL55-209ENST00000366735 ATP5J2-PTCD1G3V325 749 aa16.02■□□□□ 0.16
MRPL55-209ENST00000366735 IRS4O14654 1257 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-209ENST00000366735 FMR1Q06787 632 aaKnown RBP eCLIP16.02■□□□□ 0.16
MRPL55-209ENST00000366735 TRIM28Q13263 835 aaKnown RBP16.02■□□□□ 0.16
MRPL55-209ENST00000366735 CASP8AP2Q9UKL3 1982 aa16.02■□□□□ 0.15
MRPL55-209ENST00000366735 YDJCA8MPS7 323 aa16.01■□□□□ 0.15
MRPL55-209ENST00000366735 G3V3G9 751 aa16.01■□□□□ 0.15
MRPL55-209ENST00000366735 GNAI1P63096 354 aa16.01■□□□□ 0.15
MRPL55-209ENST00000366735 DCAF8Q5TAQ9 597 aa16.01■□□□□ 0.15
MRPL55-209ENST00000366735 TRPM4Q8TD43 1214 aa16.01■□□□□ 0.15
MRPL55-209ENST00000366735 CELF1Q92879 486 aaKnown RBP16.01■□□□□ 0.15
MRPL55-209ENST00000366735 DBNDD1Q9H9R9 158 aa16.01■□□□□ 0.15
MRPL55-209ENST00000366735 MBIPQ9NS73 344 aa16.01■□□□□ 0.15
MRPL55-209ENST00000366735 IFT57Q9NWB7 429 aa16.01■□□□□ 0.15
MRPL55-209ENST00000366735 ADAMTS8Q9UP79 889 aa16.01■□□□□ 0.15
MRPL55-209ENST00000366735 PSMD14O00487 310 aa16■□□□□ 0.15
MRPL55-209ENST00000366735 ECE2O60344 883 aa16■□□□□ 0.15
MRPL55-209ENST00000366735 DDX58O95786 925 aaKnown RBP16■□□□□ 0.15
MRPL55-209ENST00000366735 BRPF1P55201 1214 aaPredicted RBP16■□□□□ 0.15
MRPL55-209ENST00000366735 ZBTB38Q8NAP3 1195 aaPredicted RBP16■□□□□ 0.15
MRPL55-209ENST00000366735 ABHD8Q96I13 439 aa16■□□□□ 0.15
MRPL55-209ENST00000366735 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
MRPL55-209ENST00000366735 RIMBP2O15034 1052 aa15.99■□□□□ 0.15
MRPL55-209ENST00000366735 RPS8P62241 208 aaKnown RBP15.99■□□□□ 0.15
MRPL55-209ENST00000366735 NOGQ13253 232 aa15.99■□□□□ 0.15
MRPL55-209ENST00000366735 CCDC152Q4G0S7 254 aa15.99■□□□□ 0.15
MRPL55-209ENST00000366735 RTL5Q5HYW3 569 aaPredicted RBP15.99■□□□□ 0.15
MRPL55-209ENST00000366735 ZC3H12CQ9C0D7 883 aaKnown RBP15.99■□□□□ 0.15
MRPL55-209ENST00000366735 COL4A1P02462 1669 aa15.99■□□□□ 0.15
MRPL55-209ENST00000366735 AOC2O75106 756 aa15.98■□□□□ 0.15
MRPL55-209ENST00000366735 GPSM2P81274 684 aa15.98■□□□□ 0.15
MRPL55-209ENST00000366735 CCDC191Q8NCU4 936 aa15.98■□□□□ 0.15
MRPL55-209ENST00000366735 ZNF428Q96B54 188 aa15.98■□□□□ 0.15
MRPL55-209ENST00000366735 DCPSQ96C86 337 aaKnown RBP15.98■□□□□ 0.15
MRPL55-209ENST00000366735 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
MRPL55-209ENST00000366735 ZBTB12Q9Y330 459 aaPredicted RBP15.98■□□□□ 0.15
MRPL55-209ENST00000366735 ZNF609O15014 1411 aa15.97■□□□□ 0.15
MRPL55-209ENST00000366735 HIRAP54198 1017 aaPredicted RBP15.97■□□□□ 0.15
MRPL55-209ENST00000366735 HUNKP57058 714 aa15.97■□□□□ 0.15
MRPL55-209ENST00000366735 KRT26Q7Z3Y9 468 aa15.97■□□□□ 0.15
MRPL55-209ENST00000366735 TBC1D16Q8TBP0 767 aa15.97■□□□□ 0.15
MRPL55-209ENST00000366735 MYD88Q99836 296 aa15.97■□□□□ 0.15
MRPL55-209ENST00000366735 PRKRIP1Q9H875 184 aaPredicted RBP15.97■□□□□ 0.15
MRPL55-209ENST00000366735 CWC25Q9NXE8 425 aaPredicted RBP15.97■□□□□ 0.15
MRPL55-209ENST00000366735 PODXL2Q9NZ53 605 aa15.97■□□□□ 0.15
MRPL55-209ENST00000366735 POLLQ9UGP5 575 aa15.97■□□□□ 0.15
MRPL55-209ENST00000366735 GGA1Q9UJY5 639 aa15.97■□□□□ 0.15
MRPL55-209ENST00000366735 PDE8AO60658 829 aa15.96■□□□□ 0.15
MRPL55-209ENST00000366735 UFL1O94874 794 aa15.96■□□□□ 0.15
MRPL55-209ENST00000366735 PCCAP05165 728 aaPredicted RBP15.96■□□□□ 0.15
MRPL55-209ENST00000366735 ZNF853P0CG23 659 aa15.96■□□□□ 0.15
MRPL55-209ENST00000366735 KIF4BQ2VIQ3 1234 aa15.96■□□□□ 0.15
MRPL55-209ENST00000366735 TBC1D10BQ4KMP7 808 aaPredicted RBP15.96■□□□□ 0.15
MRPL55-209ENST00000366735 CCDC30Q5VVM6 783 aa15.96■□□□□ 0.15
MRPL55-209ENST00000366735 SAMD7Q7Z3H4 446 aa15.96■□□□□ 0.15
MRPL55-209ENST00000366735 USP48Q86UV5 1035 aa15.96■□□□□ 0.15
MRPL55-209ENST00000366735 C2orf69Q8N8R5 385 aa15.96■□□□□ 0.15
MRPL55-209ENST00000366735 PAPPA2Q9BXP8 1791 aa15.95■□□□□ 0.14
MRPL55-209ENST00000366735 APAF1O14727 1248 aa15.95■□□□□ 0.14
MRPL55-209ENST00000366735 DOK7Q18PE1 504 aa15.95■□□□□ 0.14
MRPL55-209ENST00000366735 ANKRD18AQ8IVF6 992 aa15.95■□□□□ 0.14
MRPL55-209ENST00000366735 SULF1Q8IWU6 871 aa15.95■□□□□ 0.14
MRPL55-209ENST00000366735 GBA2Q9HCG7 927 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-209ENST00000366735 RTL9Q8NET4 1388 aa15.95■□□□□ 0.14
MRPL55-209ENST00000366735 XDHP47989 1333 aa15.94■□□□□ 0.14
MRPL55-209ENST00000366735 SHTN1A0MZ66 631 aa15.94■□□□□ 0.14
MRPL55-209ENST00000366735 CDC5LQ99459 802 aaKnown RBP15.94■□□□□ 0.14
MRPL55-209ENST00000366735 PHAXQ9H814 394 aaKnown RBP15.94■□□□□ 0.14
MRPL55-209ENST00000366735 ZNF646O15015 1829 aaPredicted RBP15.94■□□□□ 0.14
MRPL55-209ENST00000366735 NEXNQ0ZGT2 675 aa15.93■□□□□ 0.14
MRPL55-209ENST00000366735 RBM26Q5T8P6 1007 aaKnown RBP15.93■□□□□ 0.14
MRPL55-209ENST00000366735 RGMBQ6NW40 437 aa15.93■□□□□ 0.14
MRPL55-209ENST00000366735 AGBL3Q8NEM8 1001 aa15.93■□□□□ 0.14
MRPL55-209ENST00000366735 CCDC102AQ96A19 550 aa15.93■□□□□ 0.14
MRPL55-209ENST00000366735 METTL22Q9BUU2 404 aaPredicted RBP15.93■□□□□ 0.14
MRPL55-209ENST00000366735 STK31Q9BXU1 1019 aa15.93■□□□□ 0.14
MRPL55-209ENST00000366735 TSKSQ9UJT2 592 aa15.93■□□□□ 0.14
MRPL55-209ENST00000366735 ECM29Q5VYK3 1845 aa15.93■□□□□ 0.14
MRPL55-209ENST00000366735 CCDC85CA6NKD9 419 aa15.92■□□□□ 0.14
MRPL55-209ENST00000366735 ELL2O00472 640 aaPredicted RBP15.92■□□□□ 0.14
MRPL55-209ENST00000366735 VIL1P09327 827 aaKnown RBP15.92■□□□□ 0.14
MRPL55-209ENST00000366735 ATP2B4P23634 1241 aa15.92■□□□□ 0.14
MRPL55-209ENST00000366735 SEC31BQ9NQW1 1179 aa15.92■□□□□ 0.14
MRPL55-209ENST00000366735 GGA3Q9NZ52 723 aa15.92■□□□□ 0.14
MRPL55-209ENST00000366735 RSBN1LQ6PCB5 846 aaPredicted RBP15.91■□□□□ 0.14
MRPL55-209ENST00000366735 SAGE1Q9NXZ1 904 aa15.91■□□□□ 0.14
MRPL55-209ENST00000366735 A0A1B0GUL6 1792 aa15.9■□□□□ 0.14
MRPL55-209ENST00000366735 MED23Q9ULK4 1368 aa15.9■□□□□ 0.14
MRPL55-209ENST00000366735 ADM5C9JUS6 153 aa15.9■□□□□ 0.14
MRPL55-209ENST00000366735 ZNF157P51786 506 aaPredicted RBP15.9■□□□□ 0.14
MRPL55-209ENST00000366735 CTSWP56202 376 aa15.9■□□□□ 0.14
MRPL55-209ENST00000366735 PODNQ7Z5L7 613 aa15.9■□□□□ 0.14
MRPL55-209ENST00000366735 MAP3K2Q9Y2U5 619 aa15.9■□□□□ 0.14
MRPL55-209ENST00000366735 PITPNM2Q9BZ72 1349 aa15.9■□□□□ 0.14
MRPL55-209ENST00000366735 EGFRP00533 1210 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms