RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 PTK7Q13308 1070 aa5.57□□□□□ -1.52
RNU6-238P-201ENST00000363313 GDF6Q6KF10 455 aaPredicted RBP5.57□□□□□ -1.52
RNU6-238P-201ENST00000363313 CLEC10AQ8IUN9 316 aa5.57□□□□□ -1.52
RNU6-238P-201ENST00000363313 ARMC10Q8N2F6 343 aa5.57□□□□□ -1.52
RNU6-238P-201ENST00000363313 KLHL23Q8NBE8 558 aa5.57□□□□□ -1.52
RNU6-238P-201ENST00000363313 VTI1AQ96AJ9 217 aa5.57□□□□□ -1.52
RNU6-238P-201ENST00000363313 QTRT2Q9H974 415 aaKnown RBP5.57□□□□□ -1.52
RNU6-238P-201ENST00000363313 MAFBQ9Y5Q3 323 aaPredicted RBP5.57□□□□□ -1.52
RNU6-238P-201ENST00000363313 PRR19A6NJB7 356 aa5.56□□□□□ -1.52
RNU6-238P-201ENST00000363313 MMP20O60882 483 aa5.56□□□□□ -1.52
RNU6-238P-201ENST00000363313 CD68P34810 354 aaPredicted RBP5.56□□□□□ -1.52
RNU6-238P-201ENST00000363313 DPYDQ12882 1025 aa5.56□□□□□ -1.52
RNU6-238P-201ENST00000363313 NLRP13Q86W25 1043 aa5.56□□□□□ -1.52
RNU6-238P-201ENST00000363313 ANKMY2Q8IV38 441 aa5.56□□□□□ -1.52
RNU6-238P-201ENST00000363313 POM121Q96HA1 1249 aa5.56□□□□□ -1.52
RNU6-238P-201ENST00000363313 FAM83CQ9BQN1 747 aa5.56□□□□□ -1.52
RNU6-238P-201ENST00000363313 TFIP11Q9UBB9 837 aaKnown RBP5.56□□□□□ -1.52
RNU6-238P-201ENST00000363313 J3QW42 95 aa5.55□□□□□ -1.52
RNU6-238P-201ENST00000363313 UTP4Q969X6 686 aaKnown RBP5.55□□□□□ -1.52
RNU6-238P-201ENST00000363313 MYRFLQ96LU7 910 aa5.55□□□□□ -1.52
RNU6-238P-201ENST00000363313 ADGRE2Q9UHX3 823 aa5.55□□□□□ -1.52
RNU6-238P-201ENST00000363313 HIF3AQ9Y2N7 669 aa5.55□□□□□ -1.52
RNU6-238P-201ENST00000363313 KCNMB2Q9Y691 235 aa5.55□□□□□ -1.52
RNU6-238P-201ENST00000363313 UBTFP17480 764 aaKnown RBP5.54□□□□□ -1.52
RNU6-238P-201ENST00000363313 CPSF6Q16630 551 aaKnown RBP eCLIP5.54□□□□□ -1.52
RNU6-238P-201ENST00000363313 KANK4Q5T7N3 995 aaPredicted RBP5.54□□□□□ -1.52
RNU6-238P-201ENST00000363313 CMTR1Q8N1G2 835 aaKnown RBP5.54□□□□□ -1.52
RNU6-238P-201ENST00000363313 AGGF1Q8N302 714 aaeCLIP5.54□□□□□ -1.52
RNU6-238P-201ENST00000363313 WNT8BQ93098 351 aa5.54□□□□□ -1.52
RNU6-238P-201ENST00000363313 C7orf69Q9H7B7 122 aa5.54□□□□□ -1.52
RNU6-238P-201ENST00000363313 FAM13BQ9NYF5 915 aa5.54□□□□□ -1.52
RNU6-238P-201ENST00000363313 TM4SF5O14894 197 aa5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 SMNDC1O75940 238 aaKnown RBP eCLIP5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 ANKRD34AQ69YU3 496 aa5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 FAM117BQ6P1L5 589 aa5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 TREML1Q86YW5 311 aa5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 TRIM42Q8IWZ5 723 aa5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 GALNT11Q8NCW6 608 aa5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 OR13H1Q8NG92 308 aa5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 GIMAP7Q8NHV1 300 aa5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 SPACA7Q96KW9 195 aa5.53□□□□□ -1.52
RNU6-238P-201ENST00000363313 ADAMTS4O75173 837 aa5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 CDC27P30260 824 aa5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 HYAL2Q12891 473 aa5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 CRTC2Q53ET0 693 aaPredicted RBP5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 KIAA1211Q6ZU35 1233 aa5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 ACAD11Q709F0 780 aa5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 FAM20CQ8IXL6 584 aa5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 RGL4Q8IZJ4 473 aa5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 NSUN5Q96P11 429 aaKnown RBP5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 VRTNQ9H8Y1 702 aa5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 TRIM33Q9UPN9 1127 aa5.52□□□□□ -1.53
RNU6-238P-201ENST00000363313 HMX2A2RU54 273 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L15C9J2P7 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L10C9JJH3 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L13C9JLJ4 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L12C9JPN9 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L11C9JVI0 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L21D6R901 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L18D6R9N7 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L22D6RA61 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L17D6RBQ6 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L19D6RCP7 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L20D6RJB6 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 LINC01387J3KSC0 135 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 BRD2P25440 801 aaKnown RBP5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 USP17L24Q0WX57 530 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 DUOXA2Q1HG44 320 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 OSGEPQ9NPF4 335 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 LRFN2Q9ULH4 789 aa5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 FNDC3AQ9Y2H6 1198 aaKnown RBP5.51□□□□□ -1.53
RNU6-238P-201ENST00000363313 FSCN2O14926 492 aa5.5□□□□□ -1.53
RNU6-238P-201ENST00000363313 PIK3R5Q8WYR1 880 aa5.5□□□□□ -1.53
RNU6-238P-201ENST00000363313 COL26A1Q96A83 441 aa5.5□□□□□ -1.53
RNU6-238P-201ENST00000363313 ARXQ96QS3 562 aa5.5□□□□□ -1.53
RNU6-238P-201ENST00000363313 PPP1R12CQ9BZL4 782 aa5.5□□□□□ -1.53
RNU6-238P-201ENST00000363313 ADAM19Q9H013 955 aa5.5□□□□□ -1.53
RNU6-238P-201ENST00000363313 MEGF11A6BM72 1044 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 FAM177BA6PVY3 158 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 SART1O43290 800 aaKnown RBP5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 KIF4AO95239 1232 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 WISP1O95388 367 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 PRNPP04156 253 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 POU5F2Q8N7G0 328 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 SHKBP1Q8TBC3 707 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 GLMNQ92990 594 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 ASIC4Q96FT7 647 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 FBXL18Q96ME1 805 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 RNF208Q9H0X6 261 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 SEC31BQ9NQW1 1179 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 PIM2Q9P1W9 311 aa5.49□□□□□ -1.53
RNU6-238P-201ENST00000363313 PIP4K2BP78356 416 aa5.48□□□□□ -1.53
RNU6-238P-201ENST00000363313 COX20Q5RI15 118 aa5.48□□□□□ -1.53
RNU6-238P-201ENST00000363313 CEP135Q66GS9 1140 aa5.48□□□□□ -1.53
RNU6-238P-201ENST00000363313 BEND4Q6ZU67 534 aa5.48□□□□□ -1.53
RNU6-238P-201ENST00000363313 KCNK4Q9NYG8 393 aa5.48□□□□□ -1.53
RNU6-238P-201ENST00000363313 EIF4EBP3O60516 100 aaPredicted RBP5.47□□□□□ -1.53
RNU6-238P-201ENST00000363313 BMP3P12645 472 aa5.47□□□□□ -1.53
RNU6-238P-201ENST00000363313 JUNBP17275 347 aaPredicted RBP5.47□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms