RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 PRKG1Q13976 671 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 CWF19L2Q2TBE0 894 aaKnown RBP12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 MCMDC2Q4G0Z9 681 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 PAG1Q9NWQ8 432 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 GJB2P29033 226 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 PA2G4Q9UQ80 394 aaKnown RBP12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 IVNS1ABPQ9Y6Y0 642 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 SYCP2Q9BX26 1530 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 NPATQ14207 1427 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 PABPN1LA6NDY0 278 aaKnown RBP12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 CPLX3Q8WVH0 158 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 RRP36Q96EU6 259 aaKnown RBP12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 FERMT1Q9BQL6 677 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 EXOC1Q9NV70 894 aa12.13□□□□□ -0.47
CACNA1S-201ENST00000362061 TOP1P11387 765 aaKnown RBP12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 SFPQP23246 707 aaKnown RBP eCLIP12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 PLEKHH1Q9ULM0 1364 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 TFIP11Q9UBB9 837 aaKnown RBP12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 BACH1O14867 736 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 FAM114A1Q8IWE2 563 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 SUPT20HQ8NEM7 779 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 TEX11Q8IYF3 940 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 BCS1LQ9Y276 419 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 EIF4G3O43432 1585 aaKnown RBP12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 USO1O60763 962 aaKnown RBP12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 YEATS4O95619 227 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 HCLS1P14317 486 aaPredicted RBP12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 PDE6BP35913 854 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 BRDTQ58F21 947 aaPredicted RBP12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 C8orf58Q8NAV2 365 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 LRRC2Q9BYS8 371 aa12.12□□□□□ -0.47
CACNA1S-201ENST00000362061 LRSAM1Q6UWE0 723 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 DENND2AQ9ULE3 1009 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 SH3TC1Q8TE82 1336 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 SBNO2Q9Y2G9 1366 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 RBM25P49756 843 aaKnown RBP12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 DDX17Q92841 729 aaKnown RBP12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 FAM89AQ96GI7 184 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 ZBTB21Q9ULJ3 1066 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 SYCE3A1L190 88 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 BIN1O00499 593 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 CTAGE5O15320 804 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 KRT13P13646 458 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 NIM1KQ8IY84 436 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 GPHNQ9NQX3 736 aaPredicted RBP12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 TCIRG1Q13488 830 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 KANK3Q6NY19 840 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 ARHGAP45Q92619 1136 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 FAM212AQ96EL1 285 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 ALG1Q9BT22 464 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 RAPGEF6Q8TEU7 1601 aa12.11□□□□□ -0.47
CACNA1S-201ENST00000362061 LUZP1Q86V48 1076 aa12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 HOOK2Q96ED9 719 aa12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 IMPG2Q9BZV3 1241 aa12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 YTHDC2Q9H6S0 1430 aaKnown RBP12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 HIBADHP31937 336 aaKnown RBP12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 SAP30BPQ9UHR5 308 aaKnown RBP12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 MAP3K19Q56UN5 1328 aa12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 ATP8B2P98198 1209 aa12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 TTC22Q5TAA0 569 aa12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 CCDC102BQ68D86 513 aa12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 BMP15O95972 392 aa12.1□□□□□ -0.47
CACNA1S-201ENST00000362061 TMCO5BA8MYB1 307 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 CCDC24Q8N4L8 307 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 EIF3JO75822 258 aaKnown RBP12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 STAT6P42226 847 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 CCDC91Q7Z6B0 441 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 TRIM47Q96LD4 638 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 CCDC113Q9H0I3 377 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 RPRD2Q5VT52 1461 aaKnown RBP12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 RNF113AO15541 343 aaKnown RBP12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 MSL1Q68DK7 614 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 DPY19L2Q6NUT2 758 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 CWC15Q9P013 229 aaKnown RBP12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 ABCC1P33527 1531 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 ARHGEF10O15013 1369 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 RALGAPBQ86X10 1494 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 KIF5CO60282 957 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 ACTN2P35609 894 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 TFCP2Q12800 502 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 CCDC183Q5T5S1 534 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 LEKR1Q6ZMV7 388 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 TBC1D9Q6ZT07 1266 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 RBM27Q9P2N5 1060 aaKnown RBP12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 MAST3O60307 1309 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 ZSCAN12O43309 604 aa12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 NOP2P46087 812 aaKnown RBP12.09□□□□□ -0.47
CACNA1S-201ENST00000362061 ZNF790Q6PG37 636 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 DPH6Q7L8W6 267 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 ARHGEF10LQ9HCE6 1279 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 RMND1Q9NWS8 449 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 SSX2IPQ9Y2D8 614 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 RTL9Q8NET4 1388 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 H7C1D1 291 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 ITGA6P23229 1130 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 MCM4P33991 863 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 PRPF4BQ13523 1007 aaKnown RBP12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 GOPCQ9HD26 462 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 CCDC172P0C7W6 258 aa12.08□□□□□ -0.48
CACNA1S-201ENST00000362061 TBC1D5Q92609 795 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms