RNA–Protein interactions for RNA: ENST00000361528.8

CNOT4-203, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT4, Length 2,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-203ENST00000361528 MCM6Q14566 821 aa13.37□□□□□ -0.27
CNOT4-203ENST00000361528 VIPAS39Q9H9C1 493 aa13.37□□□□□ -0.27
CNOT4-203ENST00000361528 NUP153P49790 1475 aaKnown RBP13.37□□□□□ -0.27
CNOT4-203ENST00000361528 KNDC1Q76NI1 1749 aa13.37□□□□□ -0.27
CNOT4-203ENST00000361528 FSBPO95073 299 aa13.37□□□□□ -0.27
CNOT4-203ENST00000361528 TSPY4P0CV99 314 aa13.37□□□□□ -0.27
CNOT4-203ENST00000361528 TSPY10P0CW01 314 aa13.37□□□□□ -0.27
CNOT4-203ENST00000361528 U2AF1L5P0DN76 240 aaPredicted RBP13.37□□□□□ -0.27
CNOT4-203ENST00000361528 U2AF1Q01081 240 aaKnown RBP eCLIP13.37□□□□□ -0.273e-20■■■■■ 41.5
CNOT4-203ENST00000361528 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
CNOT4-203ENST00000361528 MSANTD4Q8NCY6 345 aa13.37□□□□□ -0.27
CNOT4-203ENST00000361528 FAM204AQ9H8W3 233 aa13.37□□□□□ -0.27
CNOT4-203ENST00000361528 CPSF2Q9P2I0 782 aaKnown RBP13.37□□□□□ -0.27
CNOT4-203ENST00000361528 CHMLP26374 656 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 HSPA4P34932 840 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 MTA1Q13330 715 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 TTC14Q96N46 770 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 PLEKHF1Q96S99 279 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 UPF3BQ9BZI7 483 aaKnown RBP13.36□□□□□ -0.27
CNOT4-203ENST00000361528 NAT10Q9H0A0 1025 aaKnown RBP13.36□□□□□ -0.27
CNOT4-203ENST00000361528 MYBL2P10244 700 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 AARSP49588 968 aaKnown RBP eCLIP13.36□□□□□ -0.27
CNOT4-203ENST00000361528 MTHFSP49914 203 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 SLC8A3P57103 927 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 SF3B2Q13435 895 aaKnown RBP13.36□□□□□ -0.27
CNOT4-203ENST00000361528 ARMCX5Q6P1M9 558 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 MAGEC3Q8TD91 643 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 OTUD7AQ8TE49 926 aaPredicted RBP13.36□□□□□ -0.27
CNOT4-203ENST00000361528 ZSCAN31Q96LW9 406 aaPredicted RBP13.36□□□□□ -0.27
CNOT4-203ENST00000361528 TMX4Q9H1E5 349 aaPredicted RBP13.36□□□□□ -0.27
CNOT4-203ENST00000361528 ANO2Q9NQ90 1003 aa13.36□□□□□ -0.27
CNOT4-203ENST00000361528 SH2B1Q9NRF2 756 aaPredicted RBP13.36□□□□□ -0.27
CNOT4-203ENST00000361528 IQGAP3Q86VI3 1631 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 TUBB2AQ13885 445 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 ISM2Q6H9L7 571 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 PSMD1Q99460 953 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 TUBB2BQ9BVA1 445 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 ANO10Q9NW15 660 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 RPGRIP1LQ68CZ1 1315 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 NSD2O96028 1365 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 SBNO2Q9Y2G9 1366 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 GJB2P29033 226 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 PRPHP41219 470 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 RCSD1Q6JBY9 416 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 CCDC50Q8IVM0 306 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 DHX40Q8IX18 779 aaKnown RBP13.35□□□□□ -0.27
CNOT4-203ENST00000361528 NSD3Q9BZ95 1437 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 EPC1Q9H2F5 836 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 HOMER3Q9NSC5 361 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 ATP10DQ9P241 1426 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 RPS6KL1Q9Y6S9 549 aa13.35□□□□□ -0.27
CNOT4-203ENST00000361528 SPHKAPQ2M3C7 1700 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 PES1O00541 588 aaKnown RBP13.34□□□□□ -0.27
CNOT4-203ENST00000361528 SNUPNO95149 360 aaKnown RBP13.34□□□□□ -0.27
CNOT4-203ENST00000361528 PDCP20941 246 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 FNTAP49354 379 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 CCNHP51946 323 aaPredicted RBP13.34□□□□□ -0.27
CNOT4-203ENST00000361528 PDE1AP54750 535 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 PLCB4Q15147 1175 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 ANKRD23Q86SG2 305 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 KIAA1328Q86T90 577 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 KLHL23Q8NBE8 558 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 KCNB2Q92953 911 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 CCDC102AQ96A19 550 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 RAPGEF6Q8TEU7 1601 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 HECW2Q9P2P5 1572 aa13.34□□□□□ -0.27
CNOT4-203ENST00000361528 KINO60870 393 aaKnown RBP13.33□□□□□ -0.27
CNOT4-203ENST00000361528 N4BP1O75113 896 aaKnown RBP13.33□□□□□ -0.27
CNOT4-203ENST00000361528 CEP57L1Q8IYX8 460 aa13.33□□□□□ -0.27
CNOT4-203ENST00000361528 ZNF513Q8N8E2 541 aaPredicted RBP13.33□□□□□ -0.27
CNOT4-203ENST00000361528 TCP11Q8WWU5 503 aa13.33□□□□□ -0.27
CNOT4-203ENST00000361528 SPATA32Q96LK8 384 aa13.33□□□□□ -0.27
CNOT4-203ENST00000361528 BATF3Q9NR55 127 aa13.33□□□□□ -0.27
CNOT4-203ENST00000361528 SHTN1A0MZ66 631 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 A6NNZ2 444 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 GIGYF1O75420 1035 aaPredicted RBP13.33□□□□□ -0.28
CNOT4-203ENST00000361528 ARHGAP25P42331 645 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 CASP8Q14790 479 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 SLC5A9Q2M3M2 681 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 KIF4BQ2VIQ3 1234 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 TUBB8Q3ZCM7 444 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 PLPPR3Q6T4P5 718 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 C11orf57Q6ZUT1 292 aaPredicted RBP13.33□□□□□ -0.28
CNOT4-203ENST00000361528 B4GALNT4Q76KP1 1039 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 IRAK4Q9NWZ3 460 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 EFCAB6Q5THR3 1501 aa13.33□□□□□ -0.28
CNOT4-203ENST00000361528 RPS6KA3P51812 740 aa13.32□□□□□ -0.28
CNOT4-203ENST00000361528 SRGAP1Q7Z6B7 1085 aa13.32□□□□□ -0.28
CNOT4-203ENST00000361528 CAPN7Q9Y6W3 813 aa13.32□□□□□ -0.28
CNOT4-203ENST00000361528 TUBGCP6Q96RT7 1819 aa13.32□□□□□ -0.28
CNOT4-203ENST00000361528 ADAMTS12P58397 1594 aa13.32□□□□□ -0.28
CNOT4-203ENST00000361528 NR1I2O75469 434 aa13.32□□□□□ -0.28
CNOT4-203ENST00000361528 CHGAP10645 457 aaKnown RBP13.32□□□□□ -0.28
CNOT4-203ENST00000361528 PECAM1P16284 738 aaPredicted RBP13.32□□□□□ -0.28
CNOT4-203ENST00000361528 CLNS1AP54105 237 aaKnown RBP13.32□□□□□ -0.28
CNOT4-203ENST00000361528 AK2P54819 239 aa13.32□□□□□ -0.28
CNOT4-203ENST00000361528 CHMP4BP1P59074 171 aa13.32□□□□□ -0.28
CNOT4-203ENST00000361528 YTHDF3Q7Z739 585 aaKnown RBP13.32□□□□□ -0.28
CNOT4-203ENST00000361528 BPIFA3Q9BQP9 254 aa13.32□□□□□ -0.28
CNOT4-203ENST00000361528 ARHGEF40Q8TER5 1519 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms