RNA–Protein interactions for RNA: ENST00000361439.8

NSMCE1-201, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSMCE1, Length 1,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-201ENST00000361439 CNNM1Q9NRU3 951 aa17.19■□□□□ 0.34
NSMCE1-201ENST00000361439 RIPOR2Q9Y4F9 1068 aa17.19■□□□□ 0.34
NSMCE1-201ENST00000361439 SNED1Q8TER0 1413 aa17.19■□□□□ 0.34
NSMCE1-201ENST00000361439 XDHP47989 1333 aa17.19■□□□□ 0.34
NSMCE1-201ENST00000361439 LRRC37AA6NMS7 1700 aa17.18■□□□□ 0.34
NSMCE1-201ENST00000361439 EYA2O00167 538 aa17.18■□□□□ 0.34
NSMCE1-201ENST00000361439 FKBP4Q02790 459 aaKnown RBP eCLIP17.18■□□□□ 0.34
NSMCE1-201ENST00000361439 ZNF594Q96JF6 807 aaPredicted RBP17.18■□□□□ 0.34
NSMCE1-201ENST00000361439 TAOK3Q9H2K8 898 aa17.18■□□□□ 0.34
NSMCE1-201ENST00000361439 WWC3Q9ULE0 1092 aa17.18■□□□□ 0.34
NSMCE1-201ENST00000361439 IL15P40933 162 aaPredicted RBP17.17■□□□□ 0.34
NSMCE1-201ENST00000361439 HSP90AB4PQ58FF6 505 aa17.17■□□□□ 0.34
NSMCE1-201ENST00000361439 DPP8Q6V1X1 898 aaPredicted RBP17.17■□□□□ 0.34
NSMCE1-201ENST00000361439 ANKIB1Q9P2G1 1089 aa17.17■□□□□ 0.34
NSMCE1-201ENST00000361439 LEMD3Q9Y2U8 911 aa17.17■□□□□ 0.34
NSMCE1-201ENST00000361439 NOP58Q9Y2X3 529 aaKnown RBP17.17■□□□□ 0.34
NSMCE1-201ENST00000361439 ATP2B4P23634 1241 aa17.16■□□□□ 0.34
NSMCE1-201ENST00000361439 CHRNDQ07001 517 aa17.16■□□□□ 0.34
NSMCE1-201ENST00000361439 ARHGAP27Q6ZUM4 889 aa17.16■□□□□ 0.34
NSMCE1-201ENST00000361439 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
NSMCE1-201ENST00000361439 NSFL1CQ9UNZ2 370 aaKnown RBP17.16■□□□□ 0.34
NSMCE1-201ENST00000361439 COL4A1P02462 1669 aa17.16■□□□□ 0.34
NSMCE1-201ENST00000361439 TAF1P21675 1872 aa17.16■□□□□ 0.34
NSMCE1-201ENST00000361439 GPSM2P81274 684 aa17.15■□□□□ 0.34
NSMCE1-201ENST00000361439 OLFM4Q6UX06 510 aa17.15■□□□□ 0.34
NSMCE1-201ENST00000361439 SIRT2Q8IXJ6 389 aa17.15■□□□□ 0.34
NSMCE1-201ENST00000361439 EXOC6Q8TAG9 804 aa17.15■□□□□ 0.34
NSMCE1-201ENST00000361439 KLHDC4Q8TBB5 520 aa17.15■□□□□ 0.34
NSMCE1-201ENST00000361439 EYA3Q99504 573 aa17.15■□□□□ 0.34
NSMCE1-201ENST00000361439 GGA1Q9UJY5 639 aa17.15■□□□□ 0.34
NSMCE1-201ENST00000361439 UTRNP46939 3433 aa17.15■□□□□ 0.34
NSMCE1-201ENST00000361439 CACNA1SQ13698 1873 aa17.14■□□□□ 0.33
NSMCE1-201ENST00000361439 NFKBIEO00221 500 aa17.14■□□□□ 0.33
NSMCE1-201ENST00000361439 G3BP1Q13283 466 aaKnown RBP eCLIP17.14■□□□□ 0.33
NSMCE1-201ENST00000361439 LRRC24Q50LG9 513 aa17.14■□□□□ 0.33
NSMCE1-201ENST00000361439 ATG9AQ7Z3C6 839 aa17.14■□□□□ 0.33
NSMCE1-201ENST00000361439 PUS3Q9BZE2 481 aaKnown RBP17.14■□□□□ 0.33
NSMCE1-201ENST00000361439 FER1L6Q2WGJ9 1857 aa17.14■□□□□ 0.33
NSMCE1-201ENST00000361439 NEFLP07196 543 aa17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 LMNB1P20700 586 aa17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 UBE4AQ14139 1066 aa17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 METTL24Q5JXM2 366 aa17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 ERC1Q8IUD2 1116 aa17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 VGLL2Q8N8G2 317 aa17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 TBC1D16Q8TBP0 767 aa17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 CEP126Q9P2H0 1117 aa17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 PA2G4Q9UQ80 394 aaKnown RBP17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 PCDHB15Q9Y5E8 787 aa17.13■□□□□ 0.33
NSMCE1-201ENST00000361439 SURF6O75683 361 aaKnown RBP17.12■□□□□ 0.33
NSMCE1-201ENST00000361439 PDE8BO95263 885 aa17.12■□□□□ 0.33
NSMCE1-201ENST00000361439 HDAC1Q13547 482 aaPredicted RBP17.12■□□□□ 0.33
NSMCE1-201ENST00000361439 C15orf52Q6ZUT6 534 aaKnown RBP17.12■□□□□ 0.33
NSMCE1-201ENST00000361439 SIL1Q9H173 461 aa17.12■□□□□ 0.33
NSMCE1-201ENST00000361439 POLLQ9UGP5 575 aa17.12■□□□□ 0.33
NSMCE1-201ENST00000361439 LTBP1Q14766 1721 aa17.12■□□□□ 0.33
NSMCE1-201ENST00000361439 C6orf229H3BNL8 230 aa17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 RAB11FIP3O75154 756 aa17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 UFL1O94874 794 aa17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 KCNJ4P48050 445 aa17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 KIAA2012Q0VF49 1180 aa17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 WASHC4Q2M389 1173 aa17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 ERICH6BQ5W0A0 696 aa17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 AKAP2Q9Y2D5 859 aa17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 ZNF804BA4D1E1 1349 aa17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 ZC3H4Q9UPT8 1303 aaKnown RBP17.11■□□□□ 0.33
NSMCE1-201ENST00000361439 IARSP41252 1262 aaKnown RBP17.1■□□□□ 0.33
NSMCE1-201ENST00000361439 PUM3Q15397 648 aaKnown RBP17.1■□□□□ 0.33
NSMCE1-201ENST00000361439 ZC3H12CQ9C0D7 883 aaKnown RBP17.1■□□□□ 0.33
NSMCE1-201ENST00000361439 RWDD1Q9H446 243 aaPredicted RBP17.1■□□□□ 0.33
NSMCE1-201ENST00000361439 DCTPP1Q9H773 170 aa17.1■□□□□ 0.33
NSMCE1-201ENST00000361439 GPR108Q9NPR9 543 aa17.1■□□□□ 0.33
NSMCE1-201ENST00000361439 MED23Q9ULK4 1368 aa17.1■□□□□ 0.33
NSMCE1-201ENST00000361439 TAF5LO75529 589 aa17.09■□□□□ 0.33
NSMCE1-201ENST00000361439 IRX6P78412 446 aaPredicted RBP17.09■□□□□ 0.33
NSMCE1-201ENST00000361439 OS9Q13438 667 aaPredicted RBP17.09■□□□□ 0.33
NSMCE1-201ENST00000361439 LPIN2Q92539 896 aa17.09■□□□□ 0.33
NSMCE1-201ENST00000361439 ZNF277Q9NRM2 450 aaPredicted RBP17.09■□□□□ 0.33
NSMCE1-201ENST00000361439 DUOX1Q9NRD9 1551 aa17.09■□□□□ 0.33
NSMCE1-201ENST00000361439 SPEF2Q9C093 1822 aa17.09■□□□□ 0.33
NSMCE1-201ENST00000361439 FGFR2P21802 821 aa17.08■□□□□ 0.32
NSMCE1-201ENST00000361439 RASSF7Q02833 373 aa17.08■□□□□ 0.32
NSMCE1-201ENST00000361439 SLC51AQ86UW1 340 aa17.08■□□□□ 0.32
NSMCE1-201ENST00000361439 HELBQ8NG08 1087 aaPredicted RBP17.08■□□□□ 0.32
NSMCE1-201ENST00000361439 JDP2Q8WYK2 163 aa17.08■□□□□ 0.32
NSMCE1-201ENST00000361439 PPIP5K2O43314 1243 aa17.07■□□□□ 0.32
NSMCE1-201ENST00000361439 IFIT1P09914 478 aaKnown RBP17.07■□□□□ 0.32
NSMCE1-201ENST00000361439 LARGE2Q8N3Y3 721 aa17.07■□□□□ 0.32
NSMCE1-201ENST00000361439 GCC1Q96CN9 775 aa17.07■□□□□ 0.32
NSMCE1-201ENST00000361439 KIF1BPQ96EK5 621 aa17.07■□□□□ 0.32
NSMCE1-201ENST00000361439 IRS2Q9Y4H2 1338 aa17.06■□□□□ 0.32
NSMCE1-201ENST00000361439 ZBTB22O15209 634 aa17.06■□□□□ 0.32
NSMCE1-201ENST00000361439 SASH1O94885 1247 aa17.06■□□□□ 0.32
NSMCE1-201ENST00000361439 SLC5A1P13866 664 aa17.06■□□□□ 0.32
NSMCE1-201ENST00000361439 TFCP2Q12800 502 aa17.06■□□□□ 0.32
NSMCE1-201ENST00000361439 C9orf131Q5VYM1 1079 aa17.06■□□□□ 0.32
NSMCE1-201ENST00000361439 COA1Q9GZY4 146 aa17.06■□□□□ 0.32
NSMCE1-201ENST00000361439 EXOC6BQ9Y2D4 811 aa17.06■□□□□ 0.32
NSMCE1-201ENST00000361439 PRELPP51888 382 aa17.05■□□□□ 0.32
NSMCE1-201ENST00000361439 ATP2B3Q16720 1220 aa17.05■□□□□ 0.32
NSMCE1-201ENST00000361439 AOC3Q16853 763 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms