RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CHPF2Q9P2E5 772 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 KIF24Q5T7B8 1368 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 TMEM67Q5HYA8 995 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 ALG1Q9BT22 464 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 KDM5DQ9BY66 1539 aa15.98■□□□□ 0.15
SMC5-201ENST00000361138 RHOXF2BP0C7M4 288 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 MTIF2P46199 727 aaKnown RBP15.97■□□□□ 0.15
SMC5-201ENST00000361138 KRT24Q2M2I5 525 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 RHOXF2Q9BQY4 288 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 PTPDC1A2A3K4 754 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 IDI1Q13907 227 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 HLTFQ14527 1009 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMC5-201ENST00000361138 ZNF569Q5MCW4 686 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 FAM114A1Q8IWE2 563 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 LZTFL1Q9NQ48 299 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 SAMD9Q5K651 1589 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 SSBP05455 408 aaKnown RBP eCLIP15.97■□□□□ 0.15
SMC5-201ENST00000361138 ANKRD24Q8TF21 1146 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 BAG1Q99933 345 aaPredicted RBP15.97■□□□□ 0.15
SMC5-201ENST00000361138 DDX46Q7L014 1031 aaKnown RBP15.97■□□□□ 0.15
SMC5-201ENST00000361138 MICU3Q86XE3 530 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 RIMS2Q9UQ26 1411 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 RPS6KB1P23443 525 aa15.97■□□□□ 0.15
SMC5-201ENST00000361138 ZNF521Q96K83 1311 aa15.96■□□□□ 0.15
SMC5-201ENST00000361138 TDRD12Q587J7 1177 aaKnown RBP15.96■□□□□ 0.15
SMC5-201ENST00000361138 EBAG9O00559 213 aa15.96■□□□□ 0.15
SMC5-201ENST00000361138 CEBPAP49715 358 aaPredicted RBP15.96■□□□□ 0.15
SMC5-201ENST00000361138 KCNH5Q8NCM2 988 aa15.96■□□□□ 0.15
SMC5-201ENST00000361138 CTDP1Q9Y5B0 961 aaPredicted RBP15.96■□□□□ 0.15
SMC5-201ENST00000361138 PPIP5K1Q6PFW1 1433 aa15.96■□□□□ 0.15
SMC5-201ENST00000361138 GCOM1H8Y6P7 765 aaPredicted RBP15.96■□□□□ 0.15
SMC5-201ENST00000361138 MYZAPP0CAP1 466 aa15.96■□□□□ 0.15
SMC5-201ENST00000361138 CTCFLQ8NI51 663 aaPredicted RBP15.96■□□□□ 0.15
SMC5-201ENST00000361138 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.96■□□□□ 0.14
SMC5-201ENST00000361138 RMND1Q9NWS8 449 aa15.96■□□□□ 0.14
SMC5-201ENST00000361138 TUBBP07437 444 aa15.95■□□□□ 0.14
SMC5-201ENST00000361138 APOBRQ0VD83 1088 aa15.95■□□□□ 0.14
SMC5-201ENST00000361138 RRAGBQ5VZM2 374 aa15.95■□□□□ 0.14
SMC5-201ENST00000361138 A0A087WZG4 1122 aa15.95■□□□□ 0.14
SMC5-201ENST00000361138 PHACTR2O75167 634 aa15.95■□□□□ 0.14
SMC5-201ENST00000361138 CYLC1P35663 651 aaPredicted RBP15.95■□□□□ 0.14
SMC5-201ENST00000361138 LEO1Q8WVC0 666 aaPredicted RBP15.95■□□□□ 0.14
SMC5-201ENST00000361138 VGLL3A8MV65 326 aa15.95■□□□□ 0.14
SMC5-201ENST00000361138 EIF4A2Q14240 407 aaKnown RBP15.95■□□□□ 0.14
SMC5-201ENST00000361138 SYNMO15061 1565 aa15.95■□□□□ 0.14
SMC5-201ENST00000361138 GBP2P32456 591 aaPredicted RBP15.94■□□□□ 0.14
SMC5-201ENST00000361138 AFMP43652 599 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 CARD6Q9BX69 1037 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 ABCC1P33527 1531 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 GOLGA6L10A0A0M3HER8 536 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 MINDY4BA8MYZ0 360 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 HSPA4P34932 840 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 GIGYF2Q6Y7W6 1299 aaKnown RBP15.94■□□□□ 0.14
SMC5-201ENST00000361138 BRAPQ7Z569 592 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 CCDC91Q7Z6B0 441 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 MAGI2Q86UL8 1455 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 ALDH1L1O75891 902 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 NLRP5P59047 1200 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 MYL5Q02045 173 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 WDR7Q9Y4E6 1490 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 OAS2P29728 719 aaKnown RBP15.94■□□□□ 0.14
SMC5-201ENST00000361138 ZBTB9Q96C00 473 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 RNF41Q9H4P4 317 aaPredicted RBP15.94■□□□□ 0.14
SMC5-201ENST00000361138 PRM3Q9NNZ6 103 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 MAGI3Q5TCQ9 1506 aa15.94■□□□□ 0.14
SMC5-201ENST00000361138 PA2G4Q9UQ80 394 aaKnown RBP15.94■□□□□ 0.14
SMC5-201ENST00000361138 ERBB4Q15303 1308 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 A0A1B0GVL5 298 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 SLC27A2O14975 620 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 CD2BP2O95400 341 aaKnown RBP15.93■□□□□ 0.14
SMC5-201ENST00000361138 IKQ13123 557 aaPredicted RBP15.93■□□□□ 0.14
SMC5-201ENST00000361138 PLCH2O75038 1416 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 TRAPPC8Q9Y2L5 1435 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 MAP3K12Q12852 859 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 CCDC96Q2M329 555 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 FAM76AQ8TAV0 307 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 CDC37L1Q7L3B6 337 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 ANKRD18AQ8IVF6 992 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 ABCC4O15439 1325 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 SGSM2O43147 1006 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 SPAG1Q07617 926 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 TTF1Q15361 905 aaPredicted RBP15.93■□□□□ 0.14
SMC5-201ENST00000361138 FBXO31Q5XUX0 539 aaPredicted RBP15.93■□□□□ 0.14
SMC5-201ENST00000361138 SSH2Q76I76 1423 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 AFAP1L1Q8TED9 768 aa15.93■□□□□ 0.14
SMC5-201ENST00000361138 ANXA1P04083 346 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 SMC1AQ14683 1233 aaKnown RBP15.92■□□□□ 0.14
SMC5-201ENST00000361138 VPS36Q86VN1 386 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 PYCARDQ9ULZ3 195 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 TRIM21P19474 475 aaKnown RBP15.92■□□□□ 0.14
SMC5-201ENST00000361138 ELP1O95163 1332 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 CATIPQ7Z7H3 387 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 CAPZA3Q96KX2 299 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 KRT83P78385 493 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 OTUD6BQ8N6M0 293 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 TRIM47Q96LD4 638 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 USP19O94966 1318 aa15.92■□□□□ 0.14
SMC5-201ENST00000361138 TUBB2AQ13885 445 aa15.91■□□□□ 0.14
SMC5-201ENST00000361138 MTHFSDQ2M296 383 aaKnown RBP15.91■□□□□ 0.14
SMC5-201ENST00000361138 DHX32Q7L7V1 743 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms