RNA–Protein interactions for RNA: ENST00000359889.9

FAM3A-202, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-202ENST00000359889 LY75O60449 1722 aa25.29■■□□□ 1.64
FAM3A-202ENST00000359889 SNRKQ9NRH2 765 aa25.29■■□□□ 1.64
FAM3A-202ENST00000359889 SRP68Q9UHB9 627 aaKnown RBP25.29■■□□□ 1.64
FAM3A-202ENST00000359889 MCM2P49736 904 aa25.29■■□□□ 1.64
FAM3A-202ENST00000359889 ERFEQ4G0M1 354 aa25.29■■□□□ 1.64
FAM3A-202ENST00000359889 FAM227BQ96M60 508 aa25.29■■□□□ 1.64
FAM3A-202ENST00000359889 SBF2Q86WG5 1849 aa25.28■■□□□ 1.64
FAM3A-202ENST00000359889 GOLIM4O00461 696 aa25.28■■□□□ 1.64
FAM3A-202ENST00000359889 TRIM37O94972 964 aa25.28■■□□□ 1.64
FAM3A-202ENST00000359889 PUM3Q15397 648 aaKnown RBP25.28■■□□□ 1.64
FAM3A-202ENST00000359889 SLC10A5Q5PT55 438 aa25.28■■□□□ 1.64
FAM3A-202ENST00000359889 TPTE2Q6XPS3 522 aa25.28■■□□□ 1.64
FAM3A-202ENST00000359889 DDX46Q7L014 1031 aaKnown RBP25.28■■□□□ 1.64
FAM3A-202ENST00000359889 NBPF5PQ86XG9 351 aaPredicted RBP25.28■■□□□ 1.64
FAM3A-202ENST00000359889 EDC3Q96F86 508 aaKnown RBP25.28■■□□□ 1.64
FAM3A-202ENST00000359889 SF3B3Q15393 1217 aaKnown RBP25.27■■□□□ 1.64
FAM3A-202ENST00000359889 SPRYD3Q8NCJ5 442 aa25.27■■□□□ 1.64
FAM3A-202ENST00000359889 SCN7AQ01118 1682 aa25.27■■□□□ 1.64
FAM3A-202ENST00000359889 MYH3P11055 1940 aa25.27■■□□□ 1.64
FAM3A-202ENST00000359889 KCNJ4P48050 445 aa25.26■■□□□ 1.63
FAM3A-202ENST00000359889 VGLL2Q8N8G2 317 aa25.26■■□□□ 1.63
FAM3A-202ENST00000359889 LPIN2Q92539 896 aa25.26■■□□□ 1.63
FAM3A-202ENST00000359889 CCDC171Q6TFL3 1326 aa25.26■■□□□ 1.63
FAM3A-202ENST00000359889 PHF14O94880 888 aa25.26■■□□□ 1.63
FAM3A-202ENST00000359889 ADORA1P30542 326 aa25.26■■□□□ 1.63
FAM3A-202ENST00000359889 NEK4P51957 841 aa25.26■■□□□ 1.63
FAM3A-202ENST00000359889 SEC31BQ9NQW1 1179 aa25.26■■□□□ 1.63
FAM3A-202ENST00000359889 A0A0D9SFI3 127 aa25.25■■□□□ 1.63
FAM3A-202ENST00000359889 SMIM5Q71RC9 77 aa25.25■■□□□ 1.63
FAM3A-202ENST00000359889 ZNF512BQ96KM6 892 aaPredicted RBP25.25■■□□□ 1.63
FAM3A-202ENST00000359889 ANTXR1Q9H6X2 564 aa25.25■■□□□ 1.63
FAM3A-202ENST00000359889 LRRC4BQ9NT99 713 aa25.25■■□□□ 1.63
FAM3A-202ENST00000359889 PALD1Q9ULE6 856 aa25.25■■□□□ 1.63
FAM3A-202ENST00000359889 CD2BP2O95400 341 aaKnown RBP25.24■■□□□ 1.63
FAM3A-202ENST00000359889 SLC5A1P13866 664 aa25.24■■□□□ 1.63
FAM3A-202ENST00000359889 NLRP3Q96P20 1036 aa25.24■■□□□ 1.63
FAM3A-202ENST00000359889 CHMP5Q9NZZ3 219 aa25.24■■□□□ 1.63
FAM3A-202ENST00000359889 C4BP0C0L5 1744 aa25.24■■□□□ 1.63
FAM3A-202ENST00000359889 NPHP1O15259 732 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 UQCRFS1P1P0C7P4 283 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 ZKSCAN1P17029 563 aaPredicted RBP25.23■■□□□ 1.63
FAM3A-202ENST00000359889 FKBP4Q02790 459 aaKnown RBP eCLIP25.23■■□□□ 1.63
FAM3A-202ENST00000359889 NDUFB9Q9Y6M9 179 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 MED23Q9ULK4 1368 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 LRP5O75197 1615 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 RXRBP28702 533 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 NBR1Q14596 966 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 MCMDC2Q4G0Z9 681 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 RNF20Q5VTR2 975 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 ANKRD18AQ8IVF6 992 aa25.23■■□□□ 1.63
FAM3A-202ENST00000359889 PTH1RQ03431 593 aa25.22■■□□□ 1.63
FAM3A-202ENST00000359889 MAP4K1Q92918 833 aa25.22■■□□□ 1.63
FAM3A-202ENST00000359889 HELLSQ9NRZ9 838 aa25.22■■□□□ 1.63
FAM3A-202ENST00000359889 SNX14Q9Y5W7 946 aa25.21■■□□□ 1.63
FAM3A-202ENST00000359889 LAMB2P55268 1798 aa25.21■■□□□ 1.63
FAM3A-202ENST00000359889 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.2■■□□□ 1.63
FAM3A-202ENST00000359889 ZFYP08048 801 aaPredicted RBP25.2■■□□□ 1.63
FAM3A-202ENST00000359889 SSFA2P28290 1259 aa25.2■■□□□ 1.63
FAM3A-202ENST00000359889 CIZ1Q9ULV3 898 aaPredicted RBP25.2■■□□□ 1.63
FAM3A-202ENST00000359889 FGFR2P21802 821 aa25.2■■□□□ 1.62
FAM3A-202ENST00000359889 RBM8AQ9Y5S9 174 aaKnown RBP25.2■■□□□ 1.62
FAM3A-202ENST00000359889 CARMIL3Q8ND23 1372 aa25.19■■□□□ 1.62
FAM3A-202ENST00000359889 DDX60Q8IY21 1712 aaKnown RBP25.19■■□□□ 1.62
FAM3A-202ENST00000359889 RNF113AO15541 343 aaKnown RBP25.19■■□□□ 1.62
FAM3A-202ENST00000359889 TTF1Q15361 905 aaPredicted RBP25.19■■□□□ 1.62
FAM3A-202ENST00000359889 PRPF40BQ6NWY9 871 aaKnown RBP25.19■■□□□ 1.62
FAM3A-202ENST00000359889 HELBQ8NG08 1087 aaPredicted RBP25.19■■□□□ 1.62
FAM3A-202ENST00000359889 TAF1LQ8IZX4 1826 aa25.18■■□□□ 1.62
FAM3A-202ENST00000359889 AMIGO3Q86WK7 504 aa25.18■■□□□ 1.62
FAM3A-202ENST00000359889 KCNB2Q92953 911 aa25.18■■□□□ 1.62
FAM3A-202ENST00000359889 SPEF2Q9C093 1822 aa25.18■■□□□ 1.62
FAM3A-202ENST00000359889 NECTIN1Q15223 517 aa25.17■■□□□ 1.62
FAM3A-202ENST00000359889 TXNRD1Q16881 649 aa25.17■■□□□ 1.62
FAM3A-202ENST00000359889 ZSCAN25Q6NSZ9 544 aa25.17■■□□□ 1.62
FAM3A-202ENST00000359889 DDX24Q9GZR7 859 aaKnown RBP eCLIP25.17■■□□□ 1.626e-7■■■■□ 22.7
FAM3A-202ENST00000359889 BSDC1Q9NW68 430 aaPredicted RBP25.17■■□□□ 1.62
FAM3A-202ENST00000359889 TAF5LO75529 589 aa25.17■■□□□ 1.62
FAM3A-202ENST00000359889 ZMYM1Q5SVZ6 1142 aa25.17■■□□□ 1.62
FAM3A-202ENST00000359889 CCDC102BQ68D86 513 aa25.17■■□□□ 1.62
FAM3A-202ENST00000359889 HMG20BQ9P0W2 317 aa25.17■■□□□ 1.62
FAM3A-202ENST00000359889 ZAP70P43403 619 aa25.16■■□□□ 1.62
FAM3A-202ENST00000359889 CHRNDQ07001 517 aa25.16■■□□□ 1.62
FAM3A-202ENST00000359889 CREB3L3Q68CJ9 461 aa25.16■■□□□ 1.62
FAM3A-202ENST00000359889 ZNF589Q86UQ0 364 aaPredicted RBP25.16■■□□□ 1.62
FAM3A-202ENST00000359889 TM6SF1Q9BZW5 370 aa25.16■■□□□ 1.62
FAM3A-202ENST00000359889 U3KPZ7 1027 aaPredicted RBP25.16■■□□□ 1.62
FAM3A-202ENST00000359889 PSMA5P28066 241 aa25.15■■□□□ 1.62
FAM3A-202ENST00000359889 ARID4AP29374 1257 aaPredicted RBP25.15■■□□□ 1.62
FAM3A-202ENST00000359889 BRWD3Q6RI45 1802 aa25.15■■□□□ 1.62
FAM3A-202ENST00000359889 PLSCR1O15162 318 aa25.15■■□□□ 1.62
FAM3A-202ENST00000359889 NFIXQ14938 502 aa25.15■■□□□ 1.62
FAM3A-202ENST00000359889 C3orf67Q6ZVT6 689 aa25.15■■□□□ 1.62
FAM3A-202ENST00000359889 RASEFQ8IZ41 740 aa25.15■■□□□ 1.62
FAM3A-202ENST00000359889 UPF3BQ9BZI7 483 aaKnown RBP25.15■■□□□ 1.62
FAM3A-202ENST00000359889 NFKBIBQ15653 356 aa25.14■■□□□ 1.61
FAM3A-202ENST00000359889 CNBD1Q8NA66 436 aa25.14■■□□□ 1.61
FAM3A-202ENST00000359889 SLC27A2O14975 620 aa25.13■■□□□ 1.61
FAM3A-202ENST00000359889 MCAMP43121 646 aa25.13■■□□□ 1.61
FAM3A-202ENST00000359889 SCARF1Q14162 830 aa25.13■■□□□ 1.61
FAM3A-202ENST00000359889 CWC22Q9HCG8 908 aaKnown RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms