RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 DTNBO60941 627 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 CASC1Q6TDU7 716 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 GIGYF2Q6Y7W6 1299 aaKnown RBP6.18□□□□□ -1.42
ATXN3-202ENST00000359366 BICDL1Q6ZP65 573 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 NLRP10Q86W26 655 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 AMIGO3Q86WK7 504 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 FNBP4Q8N3X1 1017 aaPredicted RBP6.18□□□□□ -1.42
ATXN3-202ENST00000359366 CCDC24Q8N4L8 307 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 LINC00116Q8NCU8 138 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 ECHDC1Q9NTX5 307 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 CCDC87Q9NVE4 849 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 TRMT112Q9UI30 125 aaKnown RBP6.18□□□□□ -1.42
ATXN3-202ENST00000359366 NUP98P52948 1817 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 TNNI3KQ59H18 835 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 ATG9AQ7Z3C6 839 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 FAM227BQ96M60 508 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 DNAJC2Q99543 621 aaKnown RBP6.18□□□□□ -1.42
ATXN3-202ENST00000359366 COPRSQ9NQ92 184 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 HDAC5Q9UQL6 1122 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 FPGT-TNNI3KV9GXZ4 949 aa6.18□□□□□ -1.42
ATXN3-202ENST00000359366 SNAP23O00161 211 aa6.17□□□□□ -1.42
ATXN3-202ENST00000359366 PAXIP1Q6ZW49 1069 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 ERC1Q8IUD2 1116 aa6.17□□□□□ -1.42
ATXN3-202ENST00000359366 HSCBQ8IWL3 235 aa6.17□□□□□ -1.42
ATXN3-202ENST00000359366 LARP6Q9BRS8 491 aaKnown RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 GREM2Q9H772 168 aa6.17□□□□□ -1.42
ATXN3-202ENST00000359366 IRS4O14654 1257 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 FRAT2O75474 233 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 GLRX3O76003 335 aaKnown RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 ADORA1P30542 326 aa6.17□□□□□ -1.42
ATXN3-202ENST00000359366 EIF5P55010 431 aaKnown RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 SUSD4Q5VX71 490 aa6.17□□□□□ -1.42
ATXN3-202ENST00000359366 DHX37Q8IY37 1157 aaKnown RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 ZBTB38Q8NAP3 1195 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 HELBQ8NG08 1087 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 GJD4Q96KN9 370 aaPredicted RBP6.17□□□□□ -1.42
ATXN3-202ENST00000359366 UTRNP46939 3433 aa6.17□□□□□ -1.42
ATXN3-202ENST00000359366 PHF14O94880 888 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 REC8O95072 547 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 CPA1P15085 419 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 IL6STP40189 918 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-202ENST00000359366 PTH1RQ03431 593 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 CCDC57Q2TAC2 916 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 DDX46Q7L014 1031 aaKnown RBP6.16□□□□□ -1.42
ATXN3-202ENST00000359366 SEPT12Q8IYM1 358 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 CNTROBQ8N137 903 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 UPF3BQ9BZI7 483 aaKnown RBP6.16□□□□□ -1.42
ATXN3-202ENST00000359366 SNRKQ9NRH2 765 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 SRP68Q9UHB9 627 aaKnown RBP6.16□□□□□ -1.42
ATXN3-202ENST00000359366 SRCAPQ6ZRS2 3230 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 SPATA31A6Q5VVP1 1343 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 A0A0D9SFI3 127 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 CAMTA2O94983 1202 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 PCCAP05165 728 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-202ENST00000359366 ITGA6P23229 1130 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 COL9A3Q14050 684 aaPredicted RBP6.16□□□□□ -1.42
ATXN3-202ENST00000359366 NFKBIBQ15653 356 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 PI16Q6UXB8 463 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 TEX2Q8IWB9 1127 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 TTLL11Q8NHH1 800 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 GPATCH3Q96I76 525 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 FSD1Q9BTV5 496 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 ANTXR1Q9H6X2 564 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 QTRT2Q9H974 415 aaKnown RBP6.16□□□□□ -1.42
ATXN3-202ENST00000359366 SEC31BQ9NQW1 1179 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 DIAPH3Q9NSV4 1193 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 NIP7Q9Y221 180 aaKnown RBP eCLIP6.16□□□□□ -1.42
ATXN3-202ENST00000359366 AOX1Q06278 1338 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 TTC41PQ6P2S7 1318 aa6.16□□□□□ -1.42
ATXN3-202ENST00000359366 USP42Q9H9J4 1324 aaKnown RBP6.16□□□□□ -1.42
ATXN3-202ENST00000359366 TAF1P21675 1872 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 EYA2O00167 538 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 HSP90AA1P07900 732 aaKnown RBP6.15□□□□□ -1.42
ATXN3-202ENST00000359366 HMGB1P09429 215 aaKnown RBP6.15□□□□□ -1.42
ATXN3-202ENST00000359366 NMIQ13287 307 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-202ENST00000359366 IFIT5Q13325 482 aaKnown RBP6.15□□□□□ -1.42
ATXN3-202ENST00000359366 CCDC129Q6ZRS4 1044 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 SEC62Q99442 399 aaKnown RBP6.15□□□□□ -1.42
ATXN3-202ENST00000359366 COL15A1P39059 1388 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 BTAF1O14981 1849 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 A0A1B0GUL7 405 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 WTIPA6NIX2 430 aaPredicted RBP6.15□□□□□ -1.42
ATXN3-202ENST00000359366 SGSM2O43147 1006 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 NEK4P51957 841 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 CTSWP56202 376 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 HSP90AB3PQ58FF7 597 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 C3orf67Q6ZVT6 689 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 SLC51AQ86UW1 340 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 ZNF34Q8IZ26 560 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 RASEFQ8IZ41 740 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 TAF6LQ9Y6J9 622 aa6.15□□□□□ -1.42
ATXN3-202ENST00000359366 GOLIM4O00461 696 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 GNPATO15228 680 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 CHRM1P11229 460 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-202ENST00000359366 TRIM28Q13263 835 aaKnown RBP6.14□□□□□ -1.43
ATXN3-202ENST00000359366 SCARF1Q14162 830 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 LDHAL6AQ6ZMR3 332 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 ZNF589Q86UQ0 364 aaPredicted RBP6.14□□□□□ -1.43
ATXN3-202ENST00000359366 ARID3AQ99856 593 aa6.14□□□□□ -1.43
ATXN3-202ENST00000359366 LSG1Q9H089 658 aaKnown RBP6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms