RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 RASAL2Q9UJF2 1139 aa20.95■□□□□ 0.94
SHANK1-202ENST00000359082 ZHX1Q9UKY1 873 aaPredicted RBP20.95■□□□□ 0.94
SHANK1-202ENST00000359082 PLCD3Q8N3E9 789 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 TEX13AQ9BXU3 409 aaPredicted RBP20.94■□□□□ 0.94
SHANK1-202ENST00000359082 CCDC171Q6TFL3 1326 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 CALM1P0DP23 149 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 CALM2P0DP24 149 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 CALM3P0DP25 149 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 UTP14AQ9BVJ6 771 aaKnown RBP20.94■□□□□ 0.94
SHANK1-202ENST00000359082 MARCKSP29966 332 aaPredicted RBP20.94■□□□□ 0.94
SHANK1-202ENST00000359082 CYLC1P35663 651 aaPredicted RBP20.94■□□□□ 0.94
SHANK1-202ENST00000359082 PCF11O94913 1555 aaKnown RBP20.94■□□□□ 0.94
SHANK1-202ENST00000359082 GRIN2AQ12879 1464 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 RTN1Q16799 776 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 BMP2KLQ5H9B9 411 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 LRSAM1Q6UWE0 723 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 Q6ZUG5 572 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 SELENOOQ9BVL4 669 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 ARID5AQ03989 594 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 NBPF6Q5VWK0 638 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 SPATA24Q86W54 205 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 NBPF5PQ86XG9 351 aaPredicted RBP20.94■□□□□ 0.94
SHANK1-202ENST00000359082 NBPF4Q96M43 638 aa20.94■□□□□ 0.94
SHANK1-202ENST00000359082 KIF4AO95239 1232 aa20.93■□□□□ 0.94
SHANK1-202ENST00000359082 AOPEPQ8N6M6 819 aa20.93■□□□□ 0.94
SHANK1-202ENST00000359082 ZBTB9Q96C00 473 aa20.93■□□□□ 0.94
SHANK1-202ENST00000359082 TCEANC2Q96MN5 208 aa20.93■□□□□ 0.94
SHANK1-202ENST00000359082 PTPN23Q9H3S7 1636 aa20.93■□□□□ 0.94
SHANK1-202ENST00000359082 ANKRD24Q8TF21 1146 aa20.93■□□□□ 0.94
SHANK1-202ENST00000359082 TTC12Q9H892 705 aaPredicted RBP20.93■□□□□ 0.94
SHANK1-202ENST00000359082 CTAGE15A4D2H0 777 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 CTAGE8P0CG41 777 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 CTAGE6Q86UF2 777 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 USP48Q86UV5 1035 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 CTAGE4Q8IX94 777 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 CCDC63Q8NA47 563 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 TTC21BQ7Z4L5 1316 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 NBPF7P0C2Y1 421 aaPredicted RBP20.92■□□□□ 0.94
SHANK1-202ENST00000359082 VTI1AQ96AJ9 217 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 DDX12PQ92771 950 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 NSRP1Q9H0G5 558 aaKnown RBP20.92■□□□□ 0.94
SHANK1-202ENST00000359082 CHPF2Q9P2E5 772 aa20.92■□□□□ 0.94
SHANK1-202ENST00000359082 EEF2P13639 858 aaKnown RBP20.91■□□□□ 0.94
SHANK1-202ENST00000359082 ASIC1P78348 528 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 FAM212AQ96EL1 285 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 NAPAP54920 295 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 CCDC50Q8IVM0 306 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 LRRC45Q96CN5 670 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 DNAI1Q9UI46 699 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 SELENOSQ9BQE4 189 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 SNRPA1P09661 255 aaKnown RBP20.91■□□□□ 0.94
SHANK1-202ENST00000359082 RHPN1Q8TCX5 695 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 DHX58Q96C10 678 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 PLVAPQ9BX97 442 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 ADGRF5Q8IZF2 1346 aa20.91■□□□□ 0.94
SHANK1-202ENST00000359082 HSPA4P34932 840 aa20.9■□□□□ 0.94
SHANK1-202ENST00000359082 CAPZA3Q96KX2 299 aa20.9■□□□□ 0.94
SHANK1-202ENST00000359082 SDSP20132 328 aa20.9■□□□□ 0.94
SHANK1-202ENST00000359082 CCDC6Q16204 474 aa20.9■□□□□ 0.94
SHANK1-202ENST00000359082 SMARCC2Q8TAQ2 1214 aa20.9■□□□□ 0.94
SHANK1-202ENST00000359082 SKILP12757 684 aa20.89■□□□□ 0.94
SHANK1-202ENST00000359082 RAB3IL1Q8TBN0 382 aa20.89■□□□□ 0.94
SHANK1-202ENST00000359082 CHRNA2Q15822 529 aa20.89■□□□□ 0.94
SHANK1-202ENST00000359082 KCNG4Q8TDN1 519 aa20.89■□□□□ 0.94
SHANK1-202ENST00000359082 AKNAD1Q5T1N1 836 aa20.89■□□□□ 0.93
SHANK1-202ENST00000359082 ESR2Q92731 530 aa20.89■□□□□ 0.93
SHANK1-202ENST00000359082 ACSBG1Q96GR2 724 aa20.89■□□□□ 0.93
SHANK1-202ENST00000359082 RBM8AQ9Y5S9 174 aaKnown RBP20.89■□□□□ 0.93
SHANK1-202ENST00000359082 NUCB1Q02818 461 aa20.89■□□□□ 0.93
SHANK1-202ENST00000359082 ANKRD13DQ6ZTN6 518 aa20.89■□□□□ 0.93
SHANK1-202ENST00000359082 SBNO2Q9Y2G9 1366 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 GRM1Q13255 1194 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 DNAJC25Q9H1X3 360 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 PLS1Q14651 629 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 KLHL40Q2TBA0 621 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 USP37Q86T82 979 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 MRPS27Q92552 414 aaKnown RBP20.88■□□□□ 0.93
SHANK1-202ENST00000359082 CNNM2Q9H8M5 875 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 RSPH14Q9UHP6 348 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 ECM2O94769 699 aaPredicted RBP20.88■□□□□ 0.93
SHANK1-202ENST00000359082 MSL1Q68DK7 614 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 SMIM23A6NLE4 172 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 FBXO31Q5XUX0 539 aaPredicted RBP20.88■□□□□ 0.93
SHANK1-202ENST00000359082 TBC1D32Q96NH3 1257 aa20.88■□□□□ 0.93
SHANK1-202ENST00000359082 DYNC1I1O14576 645 aa20.87■□□□□ 0.93
SHANK1-202ENST00000359082 SYT1P21579 422 aa20.87■□□□□ 0.93
SHANK1-202ENST00000359082 RTL1A6NKG5 1358 aa20.87■□□□□ 0.93
SHANK1-202ENST00000359082 MCM6Q14566 821 aa20.87■□□□□ 0.93
SHANK1-202ENST00000359082 MCMDC2Q4G0Z9 681 aa20.87■□□□□ 0.93
SHANK1-202ENST00000359082 MNAT1P51948 309 aa20.87■□□□□ 0.93
SHANK1-202ENST00000359082 FAM13AO94988 1023 aa20.87■□□□□ 0.93
SHANK1-202ENST00000359082 PLB1Q6P1J6 1458 aa20.86■□□□□ 0.93
SHANK1-202ENST00000359082 TACC1O75410 805 aa20.86■□□□□ 0.93
SHANK1-202ENST00000359082 MAP3K9P80192 1104 aa20.86■□□□□ 0.93
SHANK1-202ENST00000359082 CCDC186Q7Z3E2 898 aa20.86■□□□□ 0.93
SHANK1-202ENST00000359082 PRIMPOLQ96LW4 560 aa20.86■□□□□ 0.93
SHANK1-202ENST00000359082 CTAGE9A4FU28 777 aa20.86■□□□□ 0.93
SHANK1-202ENST00000359082 ATP6V1AP38606 617 aa20.86■□□□□ 0.93
SHANK1-202ENST00000359082 NAA16Q6N069 864 aaPredicted RBP20.86■□□□□ 0.93
SHANK1-202ENST00000359082 ZBTB21Q9ULJ3 1066 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms