RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 NCAPD2Q15021 1401 aa13.15□□□□□ -0.3
SSU72-202ENST00000359060 MTMR6Q9Y217 621 aa13.15□□□□□ -0.3
SSU72-202ENST00000359060 GOLGA8BA8MQT2 603 aa13.15□□□□□ -0.3
SSU72-202ENST00000359060 BICDL1Q6ZP65 573 aa13.15□□□□□ -0.3
SSU72-202ENST00000359060 PUS3Q9BZE2 481 aaKnown RBP13.15□□□□□ -0.3
SSU72-202ENST00000359060 RNF113AO15541 343 aaKnown RBP13.14□□□□□ -0.31
SSU72-202ENST00000359060 TAF5LO75529 589 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 HMGN5P82970 282 aaKnown RBP13.14□□□□□ -0.31
SSU72-202ENST00000359060 AKAP17AQ02040 695 aaKnown RBP13.14□□□□□ -0.31
SSU72-202ENST00000359060 ZSCAN25Q6NSZ9 544 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 NCOA5Q9HCD5 579 aaKnown RBP13.14□□□□□ -0.31
SSU72-202ENST00000359060 VIRMAQ69YN4 1812 aaKnown RBP13.14□□□□□ -0.31
SSU72-202ENST00000359060 PEAK1Q9H792 1746 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 C1orf167Q5SNV9 1468 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 TPM4P67936 248 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 NECTIN1Q15223 517 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 SLFNL1Q499Z3 407 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 ACSBG1Q96GR2 724 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 ABCF2Q9UG63 623 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 ERICH2A1L162 156 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 POLR3DP05423 398 aaPredicted RBP13.14□□□□□ -0.31
SSU72-202ENST00000359060 DHX32Q7L7V1 743 aaKnown RBP13.14□□□□□ -0.31
SSU72-202ENST00000359060 ZNF592Q92610 1267 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 FER1L4A9Z1Z3 1794 aa13.14□□□□□ -0.31
SSU72-202ENST00000359060 CLEC17AQ6ZS10 378 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 C8orf76Q96K31 380 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 CCDC144CPQ8IYA2 1237 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 AKAP12Q02952 1782 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 PDIA6Q15084 440 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 CCDC82Q8N4S0 544 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 ASAP1Q9ULH1 1129 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 KLF18A0A0U1RQI7 1052 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 ERVV-2B6SEH9 535 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 CHGBP05060 677 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 SLC9C2Q5TAH2 1124 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 TTC12Q9H892 705 aaPredicted RBP13.13□□□□□ -0.31
SSU72-202ENST00000359060 LRP2BPQ9P2M1 347 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 PXDNQ92626 1479 aa13.13□□□□□ -0.31
SSU72-202ENST00000359060 TDO2P48775 406 aa13.12□□□□□ -0.31
SSU72-202ENST00000359060 XAGE2Q96GT9 111 aa13.12□□□□□ -0.31
SSU72-202ENST00000359060 KAZALD1Q96I82 304 aa13.12□□□□□ -0.31
SSU72-202ENST00000359060 ORC3Q9UBD5 711 aaPredicted RBP13.12□□□□□ -0.31
SSU72-202ENST00000359060 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
SSU72-202ENST00000359060 TTC14Q96N46 770 aa13.12□□□□□ -0.31
SSU72-202ENST00000359060 HAUS7Q99871 368 aa13.12□□□□□ -0.31
SSU72-202ENST00000359060 KNDC1Q76NI1 1749 aa13.12□□□□□ -0.31
SSU72-202ENST00000359060 PTPDC1A2A3K4 754 aa13.12□□□□□ -0.31
SSU72-202ENST00000359060 IRS4O14654 1257 aaPredicted RBP13.12□□□□□ -0.31
SSU72-202ENST00000359060 DDX19AQ9NUU7 478 aaKnown RBP13.12□□□□□ -0.31
SSU72-202ENST00000359060 IQSEC3Q9UPP2 1182 aaPredicted RBP13.12□□□□□ -0.31
SSU72-202ENST00000359060 ZKSCAN5Q9Y2L8 839 aa13.12□□□□□ -0.31
SSU72-202ENST00000359060 RGPD8O14715 1765 aaPredicted RBP13.11□□□□□ -0.31
SSU72-202ENST00000359060 TTLL5Q6EMB2 1281 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 BRINP3Q76B58 766 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 WDR17Q8IZU2 1322 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 SAFBQ15424 915 aaKnown RBP eCLIP13.11□□□□□ -0.31
SSU72-202ENST00000359060 NUP133Q8WUM0 1156 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 PXDNLA1KZ92 1463 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 TPM2P07951 284 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 CYP21A2P08686 494 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 TCIRG1Q13488 830 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 MICU3Q86XE3 530 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 DZIP3Q86Y13 1208 aaKnown RBP13.11□□□□□ -0.31
SSU72-202ENST00000359060 PPP1R9BQ96SB3 815 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 NAPBQ9H115 298 aa13.11□□□□□ -0.31
SSU72-202ENST00000359060 IGHMBP2P38935 993 aaKnown RBP13.1□□□□□ -0.31
SSU72-202ENST00000359060 FSIP1Q8NA03 581 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 ITGA6P23229 1130 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 MCM5P33992 734 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 ZNF165P49910 485 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 SART3Q15020 963 aaKnown RBP13.1□□□□□ -0.31
SSU72-202ENST00000359060 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 HELLSQ9NRZ9 838 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 KIF13AQ9H1H9 1805 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 UQCRHLA0A096LP55 91 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 NBPF26B4DH59 902 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 PRC1O43663 620 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 UQCRHP07919 91 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 ZAP70P43403 619 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 UVSSAQ2YD98 709 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 NBPF14Q5TI25 921 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 NBPF10Q6P3W6 841 aaKnown RBP13.1□□□□□ -0.31
SSU72-202ENST00000359060 CCAR1Q8IX12 1150 aaKnown RBP13.1□□□□□ -0.31
SSU72-202ENST00000359060 NBPF15Q8N660 670 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 ZSCAN16Q9H4T2 348 aaPredicted RBP13.1□□□□□ -0.31
SSU72-202ENST00000359060 ERBB4Q15303 1308 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 HEG1Q9ULI3 1381 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 ZFYP08048 801 aaPredicted RBP13.1□□□□□ -0.31
SSU72-202ENST00000359060 ANO6Q4KMQ2 910 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 FILIP1Q7Z7B0 1213 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 TTC6Q86TZ1 520 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 NACAP1Q9BZK3 213 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 RAI14Q9P0K7 980 aa13.1□□□□□ -0.31
SSU72-202ENST00000359060 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.1□□□□□ -0.31
SSU72-202ENST00000359060 CCDC69A6NI79 296 aa13.09□□□□□ -0.31
SSU72-202ENST00000359060 ADORA1P30542 326 aa13.09□□□□□ -0.31
SSU72-202ENST00000359060 CREBRFQ8IUR6 639 aa13.09□□□□□ -0.31
SSU72-202ENST00000359060 MINDY4BA8MYZ0 360 aa13.09□□□□□ -0.31
SSU72-202ENST00000359060 RXRAP19793 462 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms