RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 H3BQV1 296 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 GOLIM4O00461 696 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 TYRO3Q06418 890 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 IFFO2Q5TF58 517 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 DDX11Q96FC9 970 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 DCCP43146 1447 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 PALLDQ8WX93 1383 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 NBPF26B4DH59 902 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 AP5Z1O43299 807 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 FOXO4P98177 505 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 NBPF14Q5TI25 921 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 NBPF10Q6P3W6 841 aaKnown RBP10.16□□□□□ -0.78
RFX3-202ENST00000358730 CKAP2LQ8IYA6 745 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 NBPF15Q8N660 670 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 FAM200AQ8TCP9 573 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 BICD2Q8TD16 824 aa10.16□□□□□ -0.78
RFX3-202ENST00000358730 CWC25Q9NXE8 425 aaPredicted RBP10.16□□□□□ -0.78
RFX3-202ENST00000358730 GLIPR1L2Q4G1C9 344 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 TTLL7Q6ZT98 887 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 STOX1Q6ZVD7 989 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 C17orf53Q8N3J3 647 aaPredicted RBP10.15□□□□□ -0.78
RFX3-202ENST00000358730 DDX19AQ9NUU7 478 aaKnown RBP10.15□□□□□ -0.78
RFX3-202ENST00000358730 PAG1Q9NWQ8 432 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 FAM13BQ9NYF5 915 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 STRCP1A6NGW2 1772 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 SCRN1Q12765 414 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 RESTQ13127 1097 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 SLFNL1Q499Z3 407 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 ATG9AQ7Z3C6 839 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 MRVI1Q9Y6F6 885 aa10.15□□□□□ -0.78
RFX3-202ENST00000358730 H7C1W4 665 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 NOLC1Q14978 699 aaKnown RBP eCLIP10.14□□□□□ -0.79
RFX3-202ENST00000358730 SPC24Q8NBT2 197 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 UBR2Q8IWV8 1755 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 TIMM10P62072 90 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 PDCL3Q9H2J4 239 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 ZBTB3Q9H5J0 574 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 MYH15Q9Y2K3 1946 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 CPDO75976 1380 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 PCDH11XQ9BZA7 1347 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 PCDH11YQ9BZA8 1340 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 DYNC1I1O14576 645 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 NR1I2O75469 434 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 HMGB1P09429 215 aaKnown RBP10.14□□□□□ -0.79
RFX3-202ENST00000358730 IL15P40933 162 aaPredicted RBP10.14□□□□□ -0.79
RFX3-202ENST00000358730 FOSBP53539 338 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 ANO6Q4KMQ2 910 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 LUZP1Q86V48 1076 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 PGBD1Q96JS3 809 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 CLSTN2Q9H4D0 955 aa10.14□□□□□ -0.79
RFX3-202ENST00000358730 SPATA31A3Q5VYP0 1347 aa10.13□□□□□ -0.79
RFX3-202ENST00000358730 GOLGA6L6A8MZA4 724 aa10.13□□□□□ -0.79
RFX3-202ENST00000358730 DHX32Q7L7V1 743 aaKnown RBP10.13□□□□□ -0.79
RFX3-202ENST00000358730 ZNF594Q96JF6 807 aaPredicted RBP10.13□□□□□ -0.79
RFX3-202ENST00000358730 DSCC1Q9BVC3 393 aa10.13□□□□□ -0.79
RFX3-202ENST00000358730 ZSCAN16Q9H4T2 348 aaPredicted RBP10.13□□□□□ -0.79
RFX3-202ENST00000358730 HELLSQ9NRZ9 838 aa10.13□□□□□ -0.79
RFX3-202ENST00000358730 A1BGP04217 495 aa10.13□□□□□ -0.79
RFX3-202ENST00000358730 APOBRQ0VD83 1088 aa10.13□□□□□ -0.79
RFX3-202ENST00000358730 LRRC24Q50LG9 513 aa10.13□□□□□ -0.79
RFX3-202ENST00000358730 CADPS2Q86UW7 1296 aa10.13□□□□□ -0.79
RFX3-202ENST00000358730 GPR108Q9NPR9 543 aa10.13□□□□□ -0.79
RFX3-202ENST00000358730 NAP1L2Q9ULW6 460 aaPredicted RBP10.13□□□□□ -0.79
RFX3-202ENST00000358730 MAST3O60307 1309 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 PTPDC1A2A3K4 754 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 EYA2O00167 538 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 PFKFB2O60825 505 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 IFIT1P09914 478 aaKnown RBP10.12□□□□□ -0.79
RFX3-202ENST00000358730 CEBPZQ03701 1054 aaKnown RBP10.12□□□□□ -0.79
RFX3-202ENST00000358730 ZMYM1Q5SVZ6 1142 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 NSUN7Q8NE18 718 aaKnown RBP10.12□□□□□ -0.79
RFX3-202ENST00000358730 SMARCC2Q8TAQ2 1214 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 LLPHQ9BRT6 129 aaKnown RBP10.12□□□□□ -0.79
RFX3-202ENST00000358730 KCNF1Q9H3M0 494 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 CBX8Q9HC52 389 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 CFAP45Q9UL16 551 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 KCPQ6ZWJ8 1503 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 A0A1B0GUL7 405 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 TPM3P06753 285 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 RBM43Q6ZSC3 357 aaKnown RBP10.12□□□□□ -0.79
RFX3-202ENST00000358730 TOM1L2Q6ZVM7 507 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 ZCRB1Q8TBF4 217 aaKnown RBP10.12□□□□□ -0.79
RFX3-202ENST00000358730 SPTLC3Q9NUV7 552 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 SPEF2Q9C093 1822 aa10.12□□□□□ -0.79
RFX3-202ENST00000358730 PAPPAQ13219 1627 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 A0A0G2JLW4 131 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 HSPD1P10809 573 aaKnown RBP10.11□□□□□ -0.79
RFX3-202ENST00000358730 CCT2P78371 535 aaKnown RBP10.11□□□□□ -0.79
RFX3-202ENST00000358730 CCDC191Q8NCU4 936 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 PRDM11Q9NQV5 511 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 E7EWF7 191 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 HMGN5P82970 282 aaKnown RBP10.11□□□□□ -0.79
RFX3-202ENST00000358730 NCOA5Q9HCD5 579 aaKnown RBP10.11□□□□□ -0.79
RFX3-202ENST00000358730 PYCARDQ9ULZ3 195 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 KIF3AQ9Y496 699 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 WDR17Q8IZU2 1322 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 CTDNEP1O95476 244 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 NAA16Q6N069 864 aaPredicted RBP10.11□□□□□ -0.79
RFX3-202ENST00000358730 MYRIPQ8NFW9 859 aa10.11□□□□□ -0.79
RFX3-202ENST00000358730 PRIMPOLQ96LW4 560 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms