RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 BAG6P46379 1132 aa20.83■□□□□ 0.92
TPM1-205ENST00000357980 RILPL2Q969X0 211 aa20.83■□□□□ 0.92
TPM1-205ENST00000357980 CDC5LQ99459 802 aaKnown RBP20.83■□□□□ 0.92
TPM1-205ENST00000357980 MAP4K4O95819 1239 aaPredicted RBP20.82■□□□□ 0.92
TPM1-205ENST00000357980 MFAP1P55081 439 aaKnown RBP20.82■□□□□ 0.92
TPM1-205ENST00000357980 SF3B2Q13435 895 aaKnown RBP20.82■□□□□ 0.92
TPM1-205ENST00000357980 MPHOSPH8Q99549 860 aa20.82■□□□□ 0.92
TPM1-205ENST00000357980 PDE8BO95263 885 aa20.81■□□□□ 0.92
TPM1-205ENST00000357980 SERPINB2P05120 415 aa20.81■□□□□ 0.92
TPM1-205ENST00000357980 IGHMBP2P38935 993 aaKnown RBP20.81■□□□□ 0.92
TPM1-205ENST00000357980 CNTROBQ8N137 903 aa20.81■□□□□ 0.92
TPM1-205ENST00000357980 NEUROD6Q96NK8 337 aa20.81■□□□□ 0.92
TPM1-205ENST00000357980 UPF2Q9HAU5 1272 aaKnown RBP20.81■□□□□ 0.92
TPM1-205ENST00000357980 NPHP1O15259 732 aa20.81■□□□□ 0.92
TPM1-205ENST00000357980 SLC15A2Q16348 729 aa20.81■□□□□ 0.92
TPM1-205ENST00000357980 CASC1Q6TDU7 716 aa20.81■□□□□ 0.92
TPM1-205ENST00000357980 NLGN1Q8N2Q7 840 aa20.81■□□□□ 0.92
TPM1-205ENST00000357980 TBC1D32Q96NH3 1257 aa20.81■□□□□ 0.92
TPM1-205ENST00000357980 DEFB132Q7Z7B7 95 aa20.8■□□□□ 0.92
TPM1-205ENST00000357980 MSH5O43196 834 aa20.79■□□□□ 0.92
TPM1-205ENST00000357980 CHMLP26374 656 aa20.79■□□□□ 0.92
TPM1-205ENST00000357980 ATP2B3Q16720 1220 aa20.79■□□□□ 0.92
TPM1-205ENST00000357980 ANKRD18AQ8IVF6 992 aa20.79■□□□□ 0.92
TPM1-205ENST00000357980 BOLA2Q9H3K6 86 aa20.79■□□□□ 0.92
TPM1-205ENST00000357980 ANKRD31Q8N7Z5 1873 aa20.79■□□□□ 0.92
TPM1-205ENST00000357980 EVI5LQ96CN4 794 aa20.78■□□□□ 0.92
TPM1-205ENST00000357980 XAGE2Q96GT9 111 aa20.78■□□□□ 0.92
TPM1-205ENST00000357980 FGFR2P21802 821 aa20.78■□□□□ 0.92
TPM1-205ENST00000357980 ADORA1P30542 326 aa20.78■□□□□ 0.92
TPM1-205ENST00000357980 ST5P78524 1137 aa20.78■□□□□ 0.92
TPM1-205ENST00000357980 CELF1Q92879 486 aaKnown RBP20.78■□□□□ 0.92
TPM1-205ENST00000357980 BSDC1Q9NW68 430 aaPredicted RBP20.78■□□□□ 0.92
TPM1-205ENST00000357980 STK32BQ9NY57 414 aa20.78■□□□□ 0.92
TPM1-205ENST00000357980 EIF5BO60841 1220 aaKnown RBP20.77■□□□□ 0.92
TPM1-205ENST00000357980 PUM3Q15397 648 aaKnown RBP20.77■□□□□ 0.92
TPM1-205ENST00000357980 HAUS7Q99871 368 aa20.77■□□□□ 0.92
TPM1-205ENST00000357980 ANP32AP39687 249 aaKnown RBP20.76■□□□□ 0.91
TPM1-205ENST00000357980 CRY2Q49AN0 593 aa20.76■□□□□ 0.91
TPM1-205ENST00000357980 HELBQ8NG08 1087 aaPredicted RBP20.76■□□□□ 0.91
TPM1-205ENST00000357980 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.76■□□□□ 0.91
TPM1-205ENST00000357980 AKAP11Q9UKA4 1901 aa20.75■□□□□ 0.91
TPM1-205ENST00000357980 RPS8P62241 208 aaKnown RBP20.75■□□□□ 0.91
TPM1-205ENST00000357980 CHRNDQ07001 517 aa20.75■□□□□ 0.91
TPM1-205ENST00000357980 LPIN2Q92539 896 aa20.75■□□□□ 0.91
TPM1-205ENST00000357980 ESYT1Q9BSJ8 1104 aa20.75■□□□□ 0.91
TPM1-205ENST00000357980 C22orf23Q9BZE7 217 aa20.75■□□□□ 0.91
TPM1-205ENST00000357980 DDX46Q7L014 1031 aaKnown RBP20.74■□□□□ 0.91
TPM1-205ENST00000357980 CCDC125Q86Z20 511 aa20.74■□□□□ 0.91
TPM1-205ENST00000357980 KLRG2A4D1S0 409 aaPredicted RBP20.74■□□□□ 0.91
TPM1-205ENST00000357980 TAF5LO75529 589 aa20.74■□□□□ 0.91
TPM1-205ENST00000357980 MMP10P09238 476 aa20.73■□□□□ 0.91
TPM1-205ENST00000357980 RBM25P49756 843 aaKnown RBP20.73■□□□□ 0.91
TPM1-205ENST00000357980 CCDC158Q5M9N0 1113 aa20.73■□□□□ 0.91
TPM1-205ENST00000357980 EDC3Q96F86 508 aaKnown RBP20.73■□□□□ 0.91
TPM1-205ENST00000357980 MINPP1Q9UNW1 487 aa20.73■□□□□ 0.91
TPM1-205ENST00000357980 GORABQ5T7V8 394 aa20.72■□□□□ 0.91
TPM1-205ENST00000357980 NDUFB9Q9Y6M9 179 aa20.72■□□□□ 0.91
TPM1-205ENST00000357980 SNAP23O00161 211 aa20.71■□□□□ 0.91
TPM1-205ENST00000357980 REC8O95072 547 aa20.71■□□□□ 0.91
TPM1-205ENST00000357980 IFIT1P09914 478 aaKnown RBP20.71■□□□□ 0.91
TPM1-205ENST00000357980 SLC5A1P13866 664 aa20.71■□□□□ 0.91
TPM1-205ENST00000357980 MSL1Q68DK7 614 aa20.71■□□□□ 0.91
TPM1-205ENST00000357980 ZNF512BQ96KM6 892 aaPredicted RBP20.71■□□□□ 0.91
TPM1-205ENST00000357980 DNAJC2Q99543 621 aaKnown RBP20.71■□□□□ 0.91
TPM1-205ENST00000357980 IL25Q9H293 177 aa20.71■□□□□ 0.91
TPM1-205ENST00000357980 RFX7Q2KHR2 1363 aa20.71■□□□□ 0.91
TPM1-205ENST00000357980 GRAPQ13588 217 aa20.71■□□□□ 0.91
TPM1-205ENST00000357980 TTC39AQ5SRH9 613 aa20.71■□□□□ 0.91
TPM1-205ENST00000357980 GRAPLQ8TC17 118 aaPredicted RBP20.71■□□□□ 0.91
TPM1-205ENST00000357980 FSD1Q9BTV5 496 aa20.7■□□□□ 0.9
TPM1-205ENST00000357980 USP26Q9BXU7 913 aa20.7■□□□□ 0.9
TPM1-205ENST00000357980 COL11A2P13942 1736 aaPredicted RBP20.7■□□□□ 0.9
TPM1-205ENST00000357980 HOXA10P31260 410 aaPredicted RBP20.69■□□□□ 0.9
TPM1-205ENST00000357980 SCARF1Q14162 830 aa20.69■□□□□ 0.9
TPM1-205ENST00000357980 RPGRQ92834 1020 aaKnown RBP20.69■□□□□ 0.9
TPM1-205ENST00000357980 BRIP1Q9BX63 1249 aa20.69■□□□□ 0.9
TPM1-205ENST00000357980 DIAPH3Q9NSV4 1193 aa20.69■□□□□ 0.9
TPM1-205ENST00000357980 PAG1Q9NWQ8 432 aa20.69■□□□□ 0.9
TPM1-205ENST00000357980 PARP3Q9Y6F1 533 aa20.69■□□□□ 0.9
TPM1-205ENST00000357980 HIP1O00291 1037 aa20.69■□□□□ 0.9
TPM1-205ENST00000357980 SGSM2O43147 1006 aa20.69■□□□□ 0.9
TPM1-205ENST00000357980 ARID4AP29374 1257 aaPredicted RBP20.69■□□□□ 0.9
TPM1-205ENST00000357980 CCDC102BQ68D86 513 aa20.69■□□□□ 0.9
TPM1-205ENST00000357980 PHKA1P46020 1223 aa20.68■□□□□ 0.9
TPM1-205ENST00000357980 UBE4AQ14139 1066 aa20.68■□□□□ 0.9
TPM1-205ENST00000357980 KBTBD3Q8NAB2 608 aa20.68■□□□□ 0.9
TPM1-205ENST00000357980 MYH7P12883 1935 aa20.67■□□□□ 0.9
TPM1-205ENST00000357980 GOLIM4O00461 696 aa20.67■□□□□ 0.9
TPM1-205ENST00000357980 MCAMP43121 646 aa20.67■□□□□ 0.9
TPM1-205ENST00000357980 CWC27Q6UX04 472 aaKnown RBP20.67■□□□□ 0.9
TPM1-205ENST00000357980 TICAM2Q86XR7 235 aa20.67■□□□□ 0.9
TPM1-205ENST00000357980 LRRC37AA6NMS7 1700 aa20.67■□□□□ 0.9
TPM1-205ENST00000357980 RBM17Q96I25 401 aaKnown RBP20.67■□□□□ 0.9
TPM1-205ENST00000357980 PDGFDQ9GZP0 370 aaPredicted RBP20.67■□□□□ 0.9
TPM1-205ENST00000357980 RUFY2Q8WXA3 655 aa20.66■□□□□ 0.9
TPM1-205ENST00000357980 ANKRD2Q9GZV1 360 aa20.66■□□□□ 0.9
TPM1-205ENST00000357980 WTIPA6NIX2 430 aaPredicted RBP20.65■□□□□ 0.9
TPM1-205ENST00000357980 UQCRFS1P1P0C7P4 283 aa20.65■□□□□ 0.9
TPM1-205ENST00000357980 NMIQ13287 307 aaPredicted RBP20.65■□□□□ 0.9
TPM1-205ENST00000357980 PI16Q6UXB8 463 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms