RNA–Protein interactions for RNA: ENST00000357732.8

RTN4-204, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,390 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-204ENST00000357732 ZNF609O15014 1411 aa20.83■□□□□ 0.92
RTN4-204ENST00000357732 ZC3H6P61129 1189 aaKnown RBP20.82■□□□□ 0.92
RTN4-204ENST00000357732 STK3Q13188 491 aa20.82■□□□□ 0.92
RTN4-204ENST00000357732 SLC52A2Q9HAB3 445 aa20.82■□□□□ 0.92
RTN4-204ENST00000357732 RCOR1Q9UKL0 485 aa20.82■□□□□ 0.92
RTN4-204ENST00000357732 TRPM3Q9HCF6 1732 aaPredicted RBP20.82■□□□□ 0.92
RTN4-204ENST00000357732 PTPN12Q05209 780 aaKnown RBP20.82■□□□□ 0.92
RTN4-204ENST00000357732 AGXT2Q9BYV1 514 aa20.82■□□□□ 0.92
RTN4-204ENST00000357732 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.82■□□□□ 0.92
RTN4-204ENST00000357732 ERBB3P21860 1342 aa20.82■□□□□ 0.92
RTN4-204ENST00000357732 ZNF142P52746 1687 aaPredicted RBP20.82■□□□□ 0.92
RTN4-204ENST00000357732 GOLGA6L19H0YKK7 550 aa20.81■□□□□ 0.92
RTN4-204ENST00000357732 STX1AQ16623 288 aa20.81■□□□□ 0.92
RTN4-204ENST00000357732 CLIP2Q9UDT6 1046 aa20.81■□□□□ 0.92
RTN4-204ENST00000357732 JAK2O60674 1132 aa20.81■□□□□ 0.92
RTN4-204ENST00000357732 CYP21A2P08686 494 aa20.81■□□□□ 0.92
RTN4-204ENST00000357732 HSP90B1P14625 803 aaKnown RBP20.81■□□□□ 0.92
RTN4-204ENST00000357732 ANKRD13DQ6ZTN6 518 aa20.81■□□□□ 0.92
RTN4-204ENST00000357732 XAGE3Q8WTP9 111 aa20.81■□□□□ 0.92
RTN4-204ENST00000357732 FEZ1Q99689 392 aa20.81■□□□□ 0.92
RTN4-204ENST00000357732 EPHA10Q5JZY3 1008 aa20.8■□□□□ 0.92
RTN4-204ENST00000357732 PPP4R3BQ5MIZ7 849 aa20.8■□□□□ 0.92
RTN4-204ENST00000357732 DHX32Q7L7V1 743 aaKnown RBP20.8■□□□□ 0.92
RTN4-204ENST00000357732 KBTBD3Q8NAB2 608 aa20.8■□□□□ 0.92
RTN4-204ENST00000357732 ZNF396Q96N95 335 aaPredicted RBP20.8■□□□□ 0.92
RTN4-204ENST00000357732 MYD88Q99836 296 aa20.8■□□□□ 0.92
RTN4-204ENST00000357732 DSCC1Q9BVC3 393 aa20.8■□□□□ 0.92
RTN4-204ENST00000357732 DNAJC25Q9H1X3 360 aa20.8■□□□□ 0.92
RTN4-204ENST00000357732 HELLSQ9NRZ9 838 aa20.8■□□□□ 0.92
RTN4-204ENST00000357732 IQCB1Q15051 598 aa20.8■□□□□ 0.92
RTN4-204ENST00000357732 COPS6Q7L5N1 327 aa20.8■□□□□ 0.92
RTN4-204ENST00000357732 AFDNP55196 1824 aaKnown RBP20.8■□□□□ 0.92
RTN4-204ENST00000357732 TRHP20396 242 aaPredicted RBP20.79■□□□□ 0.92
RTN4-204ENST00000357732 DMTNQ08495 405 aa20.79■□□□□ 0.92
RTN4-204ENST00000357732 SCRN1Q12765 414 aa20.79■□□□□ 0.92
RTN4-204ENST00000357732 TSC1Q92574 1164 aa20.79■□□□□ 0.92
RTN4-204ENST00000357732 GTPBP4Q9BZE4 634 aaKnown RBP20.79■□□□□ 0.92
RTN4-204ENST00000357732 KIF1AQ12756 1690 aa20.79■□□□□ 0.92
RTN4-204ENST00000357732 SPEF2Q9C093 1822 aa20.79■□□□□ 0.92
RTN4-204ENST00000357732 KDM6AO15550 1401 aaPredicted RBP20.79■□□□□ 0.92
RTN4-204ENST00000357732 TFCP2Q12800 502 aa20.79■□□□□ 0.92
RTN4-204ENST00000357732 LRP10Q7Z4F1 713 aa20.79■□□□□ 0.92
RTN4-204ENST00000357732 NFATC2IPQ8NCF5 419 aa20.79■□□□□ 0.92
RTN4-204ENST00000357732 GPR108Q9NPR9 543 aa20.79■□□□□ 0.92
RTN4-204ENST00000357732 TMEM94Q12767 1356 aa20.78■□□□□ 0.92
RTN4-204ENST00000357732 ADD1P35611 737 aaKnown RBP20.78■□□□□ 0.92
RTN4-204ENST00000357732 RBM6P78332 1123 aaKnown RBP20.78■□□□□ 0.92
RTN4-204ENST00000357732 NSUN7Q8NE18 718 aaKnown RBP20.78■□□□□ 0.92
RTN4-204ENST00000357732 RAPGEF4Q8WZA2 1011 aa20.78■□□□□ 0.92
RTN4-204ENST00000357732 ARFGEF2Q9Y6D5 1785 aa20.78■□□□□ 0.92
RTN4-204ENST00000357732 CCDC73Q6ZRK6 1079 aa20.78■□□□□ 0.92
RTN4-204ENST00000357732 FBXL16Q8N461 479 aa20.78■□□□□ 0.92
RTN4-204ENST00000357732 JARID2Q92833 1246 aaPredicted RBP20.78■□□□□ 0.92
RTN4-204ENST00000357732 NLRP2Q9NX02 1062 aa20.78■□□□□ 0.92
RTN4-204ENST00000357732 RGPD5Q99666 1765 aa20.77■□□□□ 0.92
RTN4-204ENST00000357732 LAMA4Q16363 1823 aa20.77■□□□□ 0.92
RTN4-204ENST00000357732 SNRPA1P09661 255 aaKnown RBP20.77■□□□□ 0.92
RTN4-204ENST00000357732 FGD1P98174 961 aa20.77■□□□□ 0.92
RTN4-204ENST00000357732 KCND1Q9NSA2 647 aa20.77■□□□□ 0.92
RTN4-204ENST00000357732 ANO10Q9NW15 660 aa20.77■□□□□ 0.92
RTN4-204ENST00000357732 TNNT1P13805 278 aa20.77■□□□□ 0.91
RTN4-204ENST00000357732 PIP4K2AP48426 406 aaPredicted RBP20.77■□□□□ 0.91
RTN4-204ENST00000357732 EDC3Q96F86 508 aaKnown RBP20.77■□□□□ 0.91
RTN4-204ENST00000357732 PHKG2P15735 406 aa20.76■□□□□ 0.91
RTN4-204ENST00000357732 ZSCAN20P17040 1043 aaPredicted RBP20.76■□□□□ 0.91
RTN4-204ENST00000357732 FAM160A1Q05DH4 1040 aa20.76■□□□□ 0.91
RTN4-204ENST00000357732 LRMPQ12912 555 aa20.76■□□□□ 0.91
RTN4-204ENST00000357732 ZNF496Q96IT1 587 aaPredicted RBP20.76■□□□□ 0.91
RTN4-204ENST00000357732 SALL1Q9NSC2 1324 aa20.76■□□□□ 0.91
RTN4-204ENST00000357732 DHX8Q14562 1220 aaKnown RBP20.75■□□□□ 0.91
RTN4-204ENST00000357732 ZNF274Q96GC6 653 aaPredicted RBP20.75■□□□□ 0.91
RTN4-204ENST00000357732 NRBP1Q9UHY1 535 aa20.75■□□□□ 0.91
RTN4-204ENST00000357732 LAMB4A4D0S4 1761 aa20.75■□□□□ 0.91
RTN4-204ENST00000357732 KINO60870 393 aaKnown RBP20.75■□□□□ 0.91
RTN4-204ENST00000357732 EXOSC10Q01780 885 aaKnown RBP20.75■□□□□ 0.91
RTN4-204ENST00000357732 LRRC8AQ8IWT6 810 aa20.75■□□□□ 0.91
RTN4-204ENST00000357732 CCAR1Q8IX12 1150 aaKnown RBP20.75■□□□□ 0.91
RTN4-204ENST00000357732 CACTINQ8WUQ7 758 aaKnown RBP20.75■□□□□ 0.91
RTN4-204ENST00000357732 NAT10Q9H0A0 1025 aaKnown RBP20.75■□□□□ 0.91
RTN4-204ENST00000357732 PROSER2Q86WR7 435 aaPredicted RBP20.74■□□□□ 0.91
RTN4-204ENST00000357732 RGS22Q8NE09 1264 aa20.74■□□□□ 0.91
RTN4-204ENST00000357732 CCDC112Q8NEF3 446 aa20.74■□□□□ 0.91
RTN4-204ENST00000357732 DNAJC2Q99543 621 aaKnown RBP20.74■□□□□ 0.91
RTN4-204ENST00000357732 DBNDD2Q9BQY9 259 aa20.74■□□□□ 0.91
RTN4-204ENST00000357732 USP16Q9Y5T5 823 aa20.74■□□□□ 0.91
RTN4-204ENST00000357732 C1orf167Q5SNV9 1468 aa20.74■□□□□ 0.91
RTN4-204ENST00000357732 PTPDC1A2A3K4 754 aa20.74■□□□□ 0.91
RTN4-204ENST00000357732 TATP17735 454 aaPredicted RBP20.74■□□□□ 0.91
RTN4-204ENST00000357732 ENGASEQ8NFI3 743 aa20.74■□□□□ 0.91
RTN4-204ENST00000357732 C16orf45Q96MC5 204 aaPredicted RBP20.74■□□□□ 0.91
RTN4-204ENST00000357732 CGNQ9P2M7 1197 aaKnown RBP20.74■□□□□ 0.91
RTN4-204ENST00000357732 NCBP1Q09161 790 aaKnown RBP20.73■□□□□ 0.91
RTN4-204ENST00000357732 SNW1Q13573 536 aaKnown RBP20.73■□□□□ 0.91
RTN4-204ENST00000357732 DDX11Q96FC9 970 aa20.73■□□□□ 0.91
RTN4-204ENST00000357732 BECN2A8MW95 431 aa20.73■□□□□ 0.91
RTN4-204ENST00000357732 CASP7P55210 303 aa20.73■□□□□ 0.91
RTN4-204ENST00000357732 TPD52L1Q16890 204 aaPredicted RBP20.73■□□□□ 0.91
RTN4-204ENST00000357732 CEP57L1Q8IYX8 460 aa20.73■□□□□ 0.91
RTN4-204ENST00000357732 MEGF6O75095 1541 aa20.72■□□□□ 0.91
RTN4-204ENST00000357732 KIF2AO00139 706 aaPredicted RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 206.2 ms