RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 TRHP20396 242 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 MMS22LQ6ZRQ5 1243 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 KCNA4P22459 653 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 ZNF449Q6P9G9 518 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 IQCGQ9H095 443 aaKnown RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 GOLGA8AA7E2F4 631 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 GOLGA8BA8MQT2 603 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 KIF9Q9HAQ2 790 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 GOLGA8KD6RF30 607 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 XPO1O14980 1071 aaKnown RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 ZSCAN25Q6NSZ9 544 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 RNF187Q5TA31 235 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 RAPGEF4Q8WZA2 1011 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 TRIM6Q9C030 488 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 SCOCQ9UIL1 159 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 MAN1A1P33908 653 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC62Q6P9F0 684 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 CHCHD3Q9NX63 227 aaKnown RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 PPP1R12AO14974 1030 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 FAM96AQ9H5X1 160 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 LCMT1Q9UIC8 334 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 SKIP12755 728 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 SNAPC5O75971 98 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 CLTAP09496 248 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 SLC4A10Q6U841 1118 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 KRT4P19013 534 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 GJC2Q5T442 439 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 RUFY3Q7L099 469 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 SCINQ9Y6U3 715 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 MYOM3Q5VTT5 1437 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 CFAP73A6NFT4 308 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 MARCH6O60337 910 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 RWDD2BP57060 319 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 SPZ1Q9BXG8 430 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 ANKRD36BQ8N2N9 1353 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 BICDL2A1A5D9 508 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 FAM186BQ8IYM0 893 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 ESRRGP62508 458 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 KIFC3Q9BVG8 833 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 MAP3K5Q99683 1374 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 PRPF6O94906 941 aaKnown RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC25Q86WR0 208 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 PPCSQ9HAB8 311 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 CECR2Q9BXF3 1484 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 RAB3GAP1Q15042 981 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 FOXD4L6Q3SYB3 417 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 NUTM2DQ5VT03 806 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 FOXD4L3Q6VB84 417 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 NUTM2AQ8IVF1 878 aaPredicted RBP5.29□□□□□ -1.56
SYNE2-203ENST00000357395 FAM129AQ9BZQ8 928 aa5.29□□□□□ -1.56
SYNE2-203ENST00000357395 HARSP12081 509 aaKnown RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 SFSWAPQ12872 951 aaKnown RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 IFT20Q8IY31 132 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 AREL1O15033 823 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 TNNC1P63316 161 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 DENND2CQ68D51 928 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 PPP1R2P3Q6NXS1 205 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 PFDN4Q9NQP4 134 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 GKAP1Q5VSY0 366 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 ANKRD24Q8TF21 1146 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 DDX23Q9BUQ8 820 aaKnown RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 TTF2Q9UNY4 1162 aaKnown RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 FYCO1Q9BQS8 1478 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 EVC2Q86UK5 1308 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 ZSCAN23Q3MJ62 389 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 PAWRQ96IZ0 340 aaKnown RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 KRT2P35908 639 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 BICDL1Q6ZP65 573 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 A0A087WUV0 522 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 APBB1O00213 710 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 CERS3Q8IU89 383 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 TMEM57Q8N5G2 664 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC28BQ9BUN5 200 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 ACTN2P35609 894 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 TUBA3CQ13748 450 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC97Q96F63 343 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 JRKLQ9Y4A0 524 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 CARMIL2Q6F5E8 1435 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 USP5P45974 858 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 STAMBPL1Q96FJ0 436 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 CFAP100Q494V2 611 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 NKTRP30414 1462 aaKnown RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC12Q8WUD4 166 aaPredicted RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 IL16Q14005 1332 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 KIAA0753Q2KHM9 967 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 ME1P48163 572 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 NDUFAB1O14561 156 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 FRA10AC1Q70Z53 315 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 SYCE1Q8N0S2 351 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 PPP1R14BQ96C90 147 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 CCDC160A6NGH7 325 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 PFDN1O60925 122 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 MUM1L1Q5H9M0 696 aa5.28□□□□□ -1.56
SYNE2-203ENST00000357395 LRPPRCP42704 1394 aaKnown RBP5.28□□□□□ -1.56
SYNE2-203ENST00000357395 ACTN4O43707 911 aaKnown RBP5.27□□□□□ -1.57
SYNE2-203ENST00000357395 ARMC2Q8NEN0 867 aa5.27□□□□□ -1.57
SYNE2-203ENST00000357395 PCK1P35558 622 aa5.27□□□□□ -1.57
SYNE2-203ENST00000357395 RILPL2Q969X0 211 aa5.27□□□□□ -1.57
SYNE2-203ENST00000357395 ZNF830Q96NB3 372 aaPredicted RBP5.27□□□□□ -1.57
SYNE2-203ENST00000357395 ABCF3Q9NUQ8 709 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms