RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 A0A1B0GVL5 298 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 EPB41L2O43491 1005 aaKnown RBP7.97□□□□□ -1.13
RTN4-203ENST00000357376 U2AF2P26368 475 aaKnown RBP eCLIP7.97□□□□□ -1.137e-8■■□□□ 13
RTN4-203ENST00000357376 PRDM11Q9NQV5 511 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 PAG1Q9NWQ8 432 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 TBC1D2BQ9UPU7 963 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 ERICH2A1L162 156 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 ERICH4A6NGS2 130 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 SLC3A2P08195 630 aaKnown RBP7.97□□□□□ -1.13
RTN4-203ENST00000357376 MARCKSP29966 332 aaPredicted RBP7.97□□□□□ -1.13
RTN4-203ENST00000357376 CLSTN2Q9H4D0 955 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 GCKRQ14397 625 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 METTL24Q5JXM2 366 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 MICU3Q86XE3 530 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 TTC14Q96N46 770 aa7.97□□□□□ -1.13
RTN4-203ENST00000357376 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.97□□□□□ -1.13
RTN4-203ENST00000357376 HOOK1Q9UJC3 728 aaKnown RBP7.97□□□□□ -1.13
RTN4-203ENST00000357376 CCDC69A6NI79 296 aa7.96□□□□□ -1.13
RTN4-203ENST00000357376 ZNF213O14771 459 aa7.96□□□□□ -1.13
RTN4-203ENST00000357376 ZNF75DP51815 510 aa7.96□□□□□ -1.13
RTN4-203ENST00000357376 KIF6Q6ZMV9 814 aa7.96□□□□□ -1.13
RTN4-203ENST00000357376 DHX32Q7L7V1 743 aaKnown RBP7.96□□□□□ -1.13
RTN4-203ENST00000357376 JMYQ8N9B5 988 aa7.96□□□□□ -1.13
RTN4-203ENST00000357376 NUP133Q8WUM0 1156 aa7.96□□□□□ -1.13
RTN4-203ENST00000357376 MAP4K1Q92918 833 aa7.96□□□□□ -1.13
RTN4-203ENST00000357376 ZNF496Q96IT1 587 aaPredicted RBP7.96□□□□□ -1.13
RTN4-203ENST00000357376 ARGLU1Q9NWB6 273 aaPredicted RBP7.96□□□□□ -1.13
RTN4-203ENST00000357376 SASH1O94885 1247 aa7.96□□□□□ -1.14
RTN4-203ENST00000357376 RXRAP19793 462 aa7.96□□□□□ -1.14
RTN4-203ENST00000357376 GPTP24298 496 aa7.96□□□□□ -1.14
RTN4-203ENST00000357376 MRPS27Q92552 414 aaKnown RBP7.96□□□□□ -1.14
RTN4-203ENST00000357376 ZNF594Q96JF6 807 aaPredicted RBP7.96□□□□□ -1.14
RTN4-203ENST00000357376 FTOQ9C0B1 505 aaKnown RBP eCLIP7.96□□□□□ -1.14
RTN4-203ENST00000357376 CWC25Q9NXE8 425 aaPredicted RBP7.96□□□□□ -1.14
RTN4-203ENST00000357376 TULP1O00294 542 aaPredicted RBP7.96□□□□□ -1.14
RTN4-203ENST00000357376 LMOD1P29536 600 aaPredicted RBP7.96□□□□□ -1.14
RTN4-203ENST00000357376 MRVI1Q9Y6F6 885 aa7.96□□□□□ -1.14
RTN4-203ENST00000357376 TSPOAP1O95153 1857 aa7.95□□□□□ -1.14
RTN4-203ENST00000357376 NEURL1BA8MQ27 555 aa7.95□□□□□ -1.14
RTN4-203ENST00000357376 NECTIN1Q15223 517 aa7.95□□□□□ -1.14
RTN4-203ENST00000357376 MAP2P11137 1827 aaKnown RBP7.95□□□□□ -1.14
RTN4-203ENST00000357376 KDRP35968 1356 aa7.95□□□□□ -1.14
RTN4-203ENST00000357376 RPAP1Q9BWH6 1393 aaPredicted RBP7.95□□□□□ -1.14
RTN4-203ENST00000357376 URI1O94763 535 aaPredicted RBP7.95□□□□□ -1.14
RTN4-203ENST00000357376 GTF2E1P29083 439 aaPredicted RBP7.95□□□□□ -1.14
RTN4-203ENST00000357376 SNW1Q13573 536 aaKnown RBP7.95□□□□□ -1.14
RTN4-203ENST00000357376 GTF3C6Q969F1 213 aa7.95□□□□□ -1.14
RTN4-203ENST00000357376 METTL22Q9BUU2 404 aaPredicted RBP7.95□□□□□ -1.14
RTN4-203ENST00000357376 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.95□□□□□ -1.14
RTN4-203ENST00000357376 DBNLQ9UJU6 430 aaKnown RBP7.95□□□□□ -1.14
RTN4-203ENST00000357376 MTMR7Q9Y216 660 aa7.95□□□□□ -1.14
RTN4-203ENST00000357376 A0A0U1RQG5 324 aaPredicted RBP7.94□□□□□ -1.14
RTN4-203ENST00000357376 SMTNL1A8MU46 457 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 CAVIN2O95810 425 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 CGNQ9P2M7 1197 aaKnown RBP7.94□□□□□ -1.14
RTN4-203ENST00000357376 PAXBP1Q9Y5B6 917 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 PRC1O43663 620 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 TAF5LO75529 589 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 IFIT5Q13325 482 aaKnown RBP7.94□□□□□ -1.14
RTN4-203ENST00000357376 SLFNL1Q499Z3 407 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 ZSCAN25Q6NSZ9 544 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 TMEM87AQ8NBN3 555 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 UBXN4Q92575 508 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 AIDAQ96BJ3 306 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 IFNKQ9P0W0 207 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 VIRMAQ69YN4 1812 aaKnown RBP7.94□□□□□ -1.14
RTN4-203ENST00000357376 NEMFO60524 1076 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 TPM1P09493 284 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 KLHL10Q6JEL2 608 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 KIAA1524Q8TCG1 905 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 DDX17Q92841 729 aaKnown RBP7.94□□□□□ -1.14
RTN4-203ENST00000357376 USP28Q96RU2 1077 aa7.94□□□□□ -1.14
RTN4-203ENST00000357376 CYP21A2P08686 494 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 SART3Q15020 963 aaKnown RBP7.93□□□□□ -1.14
RTN4-203ENST00000357376 ZBTB9Q96C00 473 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 PLEKHG1Q9ULL1 1385 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 SPTLC2O15270 562 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 CDKL5O76039 1030 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 CHGBP05060 677 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 TDO2P48775 406 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 GSDMDP57764 484 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 FAM160A1Q05DH4 1040 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 LDHAL6AQ6ZMR3 332 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 VPS37DQ86XT2 251 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 TRIM22Q8IYM9 498 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 KBTBD3Q8NAB2 608 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 AKAP2Q9Y2D5 859 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 CDC42BPGQ6DT37 1551 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 OVOS2A0A0J9YW53 1432 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 OVOS2Q6IE36 1432 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 A0A1B0GUL7 405 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 TOP1P11387 765 aaKnown RBP7.93□□□□□ -1.14
RTN4-203ENST00000357376 ATP5JP18859 108 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 IL15P40933 162 aaPredicted RBP7.93□□□□□ -1.14
RTN4-203ENST00000357376 METAP2P50579 478 aaKnown RBP eCLIP7.93□□□□□ -1.14
RTN4-203ENST00000357376 SCRN1Q12765 414 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 TEX35Q5T0J7 233 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 CNNM3Q8NE01 707 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 NCOA7Q8NI08 942 aa7.93□□□□□ -1.14
RTN4-203ENST00000357376 TAF6LQ9Y6J9 622 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms