RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 ERICH2A1L162 156 aa14.53□□□□□ -0.08
BDNF-202ENST00000356660 CLGNO14967 610 aa14.53□□□□□ -0.08
BDNF-202ENST00000356660 CCDC57Q2TAC2 916 aa14.53□□□□□ -0.08
BDNF-202ENST00000356660 CEP126Q9P2H0 1117 aa14.53□□□□□ -0.08
BDNF-202ENST00000356660 QRICH2Q9H0J4 1663 aa14.53□□□□□ -0.08
BDNF-202ENST00000356660 PTPDC1A2A3K4 754 aa14.53□□□□□ -0.08
BDNF-202ENST00000356660 TET3O43151 1660 aa14.53□□□□□ -0.08
BDNF-202ENST00000356660 TULP4Q9NRJ4 1543 aa14.53□□□□□ -0.08
BDNF-202ENST00000356660 XPO4Q9C0E2 1151 aaKnown RBP14.53□□□□□ -0.08
BDNF-202ENST00000356660 DBF4Q9UBU7 674 aaPredicted RBP14.53□□□□□ -0.08
BDNF-202ENST00000356660 NOM1Q5C9Z4 860 aaKnown RBP14.52□□□□□ -0.08
BDNF-202ENST00000356660 KRBA2Q6ZNG9 492 aa14.52□□□□□ -0.08
BDNF-202ENST00000356660 TM6SF1Q9BZW5 370 aa14.52□□□□□ -0.08
BDNF-202ENST00000356660 TSPYL1Q9H0U9 437 aa14.52□□□□□ -0.08
BDNF-202ENST00000356660 EDC4Q6P2E9 1401 aaKnown RBP14.52□□□□□ -0.08
BDNF-202ENST00000356660 EVCP57679 992 aa14.52□□□□□ -0.08
BDNF-202ENST00000356660 CCDC191Q8NCU4 936 aa14.52□□□□□ -0.08
BDNF-202ENST00000356660 ARFGAP3Q9NP61 516 aa14.52□□□□□ -0.08
BDNF-202ENST00000356660 HMG20BQ9P0W2 317 aa14.52□□□□□ -0.08
BDNF-202ENST00000356660 ZFYVE16Q7Z3T8 1539 aa14.52□□□□□ -0.09
BDNF-202ENST00000356660 GOLIM4O00461 696 aa14.52□□□□□ -0.09
BDNF-202ENST00000356660 ZSCAN12O43309 604 aa14.52□□□□□ -0.09
BDNF-202ENST00000356660 CBFA2T2O43439 604 aa14.52□□□□□ -0.09
BDNF-202ENST00000356660 SLC39A6Q13433 755 aa14.52□□□□□ -0.09
BDNF-202ENST00000356660 SAFBQ15424 915 aaKnown RBP eCLIP14.51□□□□□ -0.09
BDNF-202ENST00000356660 CCDC158Q5M9N0 1113 aa14.51□□□□□ -0.09
BDNF-202ENST00000356660 TTC39AQ5SRH9 613 aa14.51□□□□□ -0.09
BDNF-202ENST00000356660 GPATCH11Q8N954 259 aa14.51□□□□□ -0.09
BDNF-202ENST00000356660 USP28Q96RU2 1077 aa14.51□□□□□ -0.09
BDNF-202ENST00000356660 U3KPZ7 1027 aaPredicted RBP14.51□□□□□ -0.09
BDNF-202ENST00000356660 CTIFO43310 598 aaKnown RBP14.51□□□□□ -0.09
BDNF-202ENST00000356660 PHACTR2O75167 634 aa14.51□□□□□ -0.09
BDNF-202ENST00000356660 TPM1P09493 284 aa14.51□□□□□ -0.09
BDNF-202ENST00000356660 FAM160A1Q05DH4 1040 aa14.51□□□□□ -0.09
BDNF-202ENST00000356660 CCDC12Q8WUD4 166 aaPredicted RBP14.51□□□□□ -0.09
BDNF-202ENST00000356660 KARSQ15046 597 aaKnown RBP14.51□□□□□ -0.09
BDNF-202ENST00000356660 RNF216Q9NWF9 866 aaPredicted RBP14.51□□□□□ -0.09
BDNF-202ENST00000356660 TBC1D2BQ9UPU7 963 aa14.51□□□□□ -0.09
BDNF-202ENST00000356660 KLHL10Q6JEL2 608 aa14.5□□□□□ -0.09
BDNF-202ENST00000356660 PGBD1Q96JS3 809 aa14.5□□□□□ -0.09
BDNF-202ENST00000356660 ZBTB3Q9H5J0 574 aa14.5□□□□□ -0.09
BDNF-202ENST00000356660 IDH1O75874 414 aaKnown RBP14.5□□□□□ -0.09
BDNF-202ENST00000356660 SEC31AO94979 1220 aaKnown RBP14.5□□□□□ -0.09
BDNF-202ENST00000356660 KIF6Q6ZMV9 814 aa14.5□□□□□ -0.09
BDNF-202ENST00000356660 ORC3Q9UBD5 711 aaPredicted RBP14.5□□□□□ -0.09
BDNF-202ENST00000356660 KCNH5Q8NCM2 988 aa14.5□□□□□ -0.09
BDNF-202ENST00000356660 IL17REQ8NFR9 667 aa14.5□□□□□ -0.09
BDNF-202ENST00000356660 LRRC59Q96AG4 307 aaKnown RBP14.5□□□□□ -0.09
BDNF-202ENST00000356660 EAF2Q96CJ1 260 aaPredicted RBP14.5□□□□□ -0.09
BDNF-202ENST00000356660 SHPRHQ149N8 1683 aa14.5□□□□□ -0.09
BDNF-202ENST00000356660 KIF4BQ2VIQ3 1234 aa14.5□□□□□ -0.09
BDNF-202ENST00000356660 SEC62Q99442 399 aaKnown RBP14.5□□□□□ -0.09
BDNF-202ENST00000356660 SNRKQ9NRH2 765 aa14.5□□□□□ -0.09
BDNF-202ENST00000356660 HOOK1Q9UJC3 728 aaKnown RBP14.5□□□□□ -0.09
BDNF-202ENST00000356660 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.5□□□□□ -0.09
BDNF-202ENST00000356660 MRFAP1L1Q96HT8 127 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 BICC1Q9H694 974 aaKnown RBP14.49□□□□□ -0.09
BDNF-202ENST00000356660 ERCC6L2Q5T890 1561 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 SHROOM2Q13796 1616 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 A0A087WZG4 1122 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 EPB41L2O43491 1005 aaKnown RBP14.49□□□□□ -0.09
BDNF-202ENST00000356660 KCNQ3O43525 872 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 GOLGA8FQ08AF8 430 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 GOLGA8DPQ0D2H9 430 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 JAKMIP3Q5VZ66 844 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 TXLNBQ8N3L3 684 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 CCDC82Q8N4S0 544 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 FUCA2Q9BTY2 467 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 GOLGA8BA8MQT2 603 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 GRM8O00222 908 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 IRX5P78411 483 aaPredicted RBP14.49□□□□□ -0.09
BDNF-202ENST00000356660 LGR6Q9HBX8 967 aa14.49□□□□□ -0.09
BDNF-202ENST00000356660 UBE3BQ7Z3V4 1068 aa14.48□□□□□ -0.09
BDNF-202ENST00000356660 PPFIBP1Q86W92 1011 aa14.48□□□□□ -0.09
BDNF-202ENST00000356660 PLA2G4DQ86XP0 818 aa14.48□□□□□ -0.09
BDNF-202ENST00000356660 PUF60Q9UHX1 559 aaKnown RBP14.48□□□□□ -0.09
BDNF-202ENST00000356660 ELP1O95163 1332 aa14.48□□□□□ -0.09
BDNF-202ENST00000356660 BICDL1Q6ZP65 573 aa14.48□□□□□ -0.09
BDNF-202ENST00000356660 JMYQ8N9B5 988 aa14.48□□□□□ -0.09
BDNF-202ENST00000356660 PCMTD1Q96MG8 357 aaPredicted RBP14.48□□□□□ -0.09
BDNF-202ENST00000356660 TLR7Q9NYK1 1049 aaKnown RBP14.48□□□□□ -0.09
BDNF-202ENST00000356660 CLCN6P51797 869 aa14.48□□□□□ -0.09
BDNF-202ENST00000356660 HNRNPH2P55795 449 aaKnown RBP14.48□□□□□ -0.09
BDNF-202ENST00000356660 MORC2Q9Y6X9 1032 aaPredicted RBP14.48□□□□□ -0.09
BDNF-202ENST00000356660 OAS2P29728 719 aaKnown RBP14.47□□□□□ -0.09
BDNF-202ENST00000356660 ZNF589Q86UQ0 364 aaPredicted RBP14.47□□□□□ -0.09
BDNF-202ENST00000356660 SPTLC2O15270 562 aa14.47□□□□□ -0.09
BDNF-202ENST00000356660 SLFN14P0C7P3 912 aa14.47□□□□□ -0.09
BDNF-202ENST00000356660 SYKP43405 635 aa14.47□□□□□ -0.09
BDNF-202ENST00000356660 NECTIN1Q15223 517 aa14.47□□□□□ -0.09
BDNF-202ENST00000356660 CNNM3Q8NE01 707 aa14.47□□□□□ -0.09
BDNF-202ENST00000356660 MAP4K1Q92918 833 aa14.47□□□□□ -0.09
BDNF-202ENST00000356660 MPHOSPH8Q99549 860 aa14.47□□□□□ -0.09
BDNF-202ENST00000356660 GPTP24298 496 aa14.47□□□□□ -0.09
BDNF-202ENST00000356660 AXDND1Q5T1B0 1012 aaPredicted RBP14.47□□□□□ -0.09
BDNF-202ENST00000356660 EPC1Q9H2F5 836 aa14.47□□□□□ -0.09
BDNF-202ENST00000356660 ZCCHC17Q9NP64 241 aaKnown RBP14.47□□□□□ -0.09
BDNF-202ENST00000356660 EIF3JO75822 258 aaKnown RBP14.46□□□□□ -0.09
BDNF-202ENST00000356660 CAPN2P17655 700 aa14.46□□□□□ -0.09
BDNF-202ENST00000356660 FANCCQ00597 558 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms