RNA–Protein interactions for RNA: ENST00000356073.8

TCF4-202, Transcript of transcription factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF4, Length 8,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-202ENST00000356073 MPNDQ8N594 471 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 CUX1P39880 1505 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 STX8Q9UNK0 236 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 MYCP01106 439 aaPredicted RBP12.81□□□□□ -0.36
TCF4-202ENST00000356073 TRAF1Q13077 416 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 MAATS1Q7Z4T9 603 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 CDC5LQ99459 802 aaKnown RBP12.81□□□□□ -0.36
TCF4-202ENST00000356073 CALM1P0DP23 149 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 CALM2P0DP24 149 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 CALM3P0DP25 149 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 PDE6AP16499 860 aa12.81□□□□□ -0.36
TCF4-202ENST00000356073 CWC27Q6UX04 472 aaKnown RBP12.81□□□□□ -0.36
TCF4-202ENST00000356073 CCDC94Q9BW85 323 aaPredicted RBP12.81□□□□□ -0.36
TCF4-202ENST00000356073 HARSP12081 509 aaKnown RBP12.8□□□□□ -0.36
TCF4-202ENST00000356073 ARHGEF6Q15052 776 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 SMARCC2Q8TAQ2 1214 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 TMOD4Q9NZQ9 345 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 ATP2A1O14983 1001 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 TMEM110-MUSTN1A8MSY1 372 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 TNNI2P48788 182 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
TCF4-202ENST00000356073 LRCH2Q5VUJ6 765 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 PPFIBP2Q8ND30 876 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 C1orf115Q9H7X2 142 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 TTLL3Q9Y4R7 772 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 RAB3GAP2Q9H2M9 1393 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 STMN1P16949 149 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 TTF1Q15361 905 aaPredicted RBP12.8□□□□□ -0.36
TCF4-202ENST00000356073 MUM1L1Q5H9M0 696 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 RAB3IPQ96QF0 476 aaPredicted RBP12.8□□□□□ -0.36
TCF4-202ENST00000356073 U3KPZ7 1027 aaPredicted RBP12.8□□□□□ -0.36
TCF4-202ENST00000356073 CARMIL1Q5VZK9 1371 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 NR1I2O75469 434 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 IRX5P78411 483 aaPredicted RBP12.8□□□□□ -0.36
TCF4-202ENST00000356073 CDR2Q01850 454 aa12.8□□□□□ -0.36
TCF4-202ENST00000356073 PRKG1Q13976 671 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 CCDC125Q86Z20 511 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 CCDC155Q8N6L0 562 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 CEP120Q8N960 986 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 CDCA7Q9BWT1 371 aaPredicted RBP12.79□□□□□ -0.36
TCF4-202ENST00000356073 RNF41Q9H4P4 317 aaPredicted RBP12.79□□□□□ -0.36
TCF4-202ENST00000356073 TOM1O60784 492 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 CKAP4Q07065 602 aaKnown RBP12.79□□□□□ -0.36
TCF4-202ENST00000356073 PPP1R21Q6ZMI0 780 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 NOP56O00567 594 aaKnown RBP12.79□□□□□ -0.36
TCF4-202ENST00000356073 LMCD1Q9NZU5 365 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 E7EVH7 732 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 ATP11AP98196 1134 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 TMTC4Q5T4D3 741 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 SULT6B1Q6IMI4 303 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 C6orf50Q9HD87 102 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 SSFA2P28290 1259 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 RNF169Q8NCN4 708 aa12.79□□□□□ -0.36
TCF4-202ENST00000356073 IFIT3O14879 490 aaKnown RBP12.78□□□□□ -0.36
TCF4-202ENST00000356073 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
TCF4-202ENST00000356073 CLCN1P35523 988 aa12.78□□□□□ -0.36
TCF4-202ENST00000356073 SSRP1Q08945 709 aaKnown RBP12.78□□□□□ -0.36
TCF4-202ENST00000356073 CCDC183Q5T5S1 534 aa12.78□□□□□ -0.36
TCF4-202ENST00000356073 ERCC3P19447 782 aa12.78□□□□□ -0.36
TCF4-202ENST00000356073 MAP3K11Q16584 847 aa12.78□□□□□ -0.36
TCF4-202ENST00000356073 JAKMIP1Q96N16 626 aaKnown RBP12.78□□□□□ -0.36
TCF4-202ENST00000356073 VCXQ9H320 206 aa12.78□□□□□ -0.36
TCF4-202ENST00000356073 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.78□□□□□ -0.36
TCF4-202ENST00000356073 IFI16Q16666 785 aaKnown RBP12.78□□□□□ -0.36
TCF4-202ENST00000356073 GSTO1P78417 241 aa12.78□□□□□ -0.36
TCF4-202ENST00000356073 KNL1Q8NG31 2342 aa12.78□□□□□ -0.36
TCF4-202ENST00000356073 SMCR8Q8TEV9 937 aaPredicted RBP12.78□□□□□ -0.36
TCF4-202ENST00000356073 PALM3A6NDB9 673 aaPredicted RBP12.77□□□□□ -0.36
TCF4-202ENST00000356073 OATP04181 439 aa12.77□□□□□ -0.36
TCF4-202ENST00000356073 KRT32Q14532 448 aa12.77□□□□□ -0.36
TCF4-202ENST00000356073 CEP128Q6ZU80 1094 aa12.77□□□□□ -0.36
TCF4-202ENST00000356073 LMNTD2Q8IXW0 634 aa12.77□□□□□ -0.36
TCF4-202ENST00000356073 RIOK1Q9BRS2 568 aaKnown RBP12.77□□□□□ -0.36
TCF4-202ENST00000356073 PDRG1Q9NUG6 133 aa12.77□□□□□ -0.36
TCF4-202ENST00000356073 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.36
TCF4-202ENST00000356073 TEX2Q8IWB9 1127 aa12.77□□□□□ -0.36
TCF4-202ENST00000356073 GABPB2Q8TAK5 448 aaPredicted RBP12.77□□□□□ -0.36
TCF4-202ENST00000356073 SKA2Q8WVK7 121 aaPredicted RBP12.77□□□□□ -0.36
TCF4-202ENST00000356073 POLA1P09884 1462 aaPredicted RBP12.77□□□□□ -0.36
TCF4-202ENST00000356073 HSF2BPO75031 334 aa12.77□□□□□ -0.36
TCF4-202ENST00000356073 CUX2O14529 1486 aa12.77□□□□□ -0.36
TCF4-202ENST00000356073 VCX3BQ9H321 246 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 CNTLNQ9NXG0 1405 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 YEATS4O95619 227 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 TSPY3P0CV98 308 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 TSPY8P0CW00 308 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 UBA7P41226 1012 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 ZNF365Q70YC5 407 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 CACNA2D3Q8IZS8 1091 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 GANCQ8TET4 914 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 VPS52Q8N1B4 723 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 PSMD6Q15008 389 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 C1orf228Q6PIY5 440 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 SETDB2Q96T68 719 aa12.77□□□□□ -0.37
TCF4-202ENST00000356073 WHAMMP3Q1A5X7 153 aa12.76□□□□□ -0.37
TCF4-202ENST00000356073 NAP1L4Q99733 375 aaKnown RBP12.76□□□□□ -0.37
TCF4-202ENST00000356073 GBP1P32455 592 aa12.76□□□□□ -0.37
TCF4-202ENST00000356073 FAM193BQ96PV7 902 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms