RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 NEK1Q96PY6 1258 aa12.94□□□□□ -0.34
FN1-204ENST00000356005 GTPBP4Q9BZE4 634 aaKnown RBP12.94□□□□□ -0.34
FN1-204ENST00000356005 TRPC5Q9UL62 973 aaPredicted RBP12.94□□□□□ -0.34
FN1-204ENST00000356005 ARHGEF5Q12774 1597 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 FAM98CQ17RN3 349 aaKnown RBP12.93□□□□□ -0.34
FN1-204ENST00000356005 FAM43AQ8N2R8 423 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 RSPH6AQ9H0K4 717 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 RTN1Q16799 776 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 MAGI2Q86UL8 1455 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 LIG1P18858 919 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 MCMDC2Q4G0Z9 681 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 PLVAPQ9BX97 442 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 ZBTB43O43298 467 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 USO1O60763 962 aaKnown RBP12.93□□□□□ -0.34
FN1-204ENST00000356005 TCOF1Q13428 1488 aaKnown RBP12.93□□□□□ -0.34
FN1-204ENST00000356005 GOLGA6L7A0A1B0GV03 622 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 EIF3JO75822 258 aaKnown RBP12.93□□□□□ -0.34
FN1-204ENST00000356005 GNA11P29992 359 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 CCDC83Q8IWF9 413 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 MAP7D2Q96T17 732 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 GLT8D2Q9H1C3 349 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 MICU3Q86XE3 530 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 VSIG10Q8N0Z9 540 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 LINS1Q8NG48 757 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 ZSCAN16Q9H4T2 348 aaPredicted RBP12.93□□□□□ -0.34
FN1-204ENST00000356005 SBNO1A3KN83 1393 aa12.93□□□□□ -0.34
FN1-204ENST00000356005 MCM3P25205 808 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 EIF4A2Q14240 407 aaKnown RBP12.92□□□□□ -0.34
FN1-204ENST00000356005 ZNF771Q7L3S4 317 aaPredicted RBP12.92□□□□□ -0.34
FN1-204ENST00000356005 USP16Q9Y5T5 823 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 GRIPAP1Q4V328 841 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 ARHGAP29Q52LW3 1261 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 TAF12Q16514 161 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 AXDND1Q5T1B0 1012 aaPredicted RBP12.92□□□□□ -0.34
FN1-204ENST00000356005 NAP1L4Q99733 375 aaKnown RBP12.92□□□□□ -0.34
FN1-204ENST00000356005 EXOC1Q9NV70 894 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 TNFAIP1Q13829 316 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 IFI16Q16666 785 aaKnown RBP12.92□□□□□ -0.34
FN1-204ENST00000356005 LARGE2Q8N3Y3 721 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 SYNCQ9H7C4 482 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 SPC25Q9HBM1 224 aa12.92□□□□□ -0.34
FN1-204ENST00000356005 DPP8Q6V1X1 898 aaPredicted RBP12.91□□□□□ -0.34
FN1-204ENST00000356005 CCDC117Q8IWD4 279 aaPredicted RBP12.91□□□□□ -0.34
FN1-204ENST00000356005 DDX12PQ92771 950 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 DISP3Q9P2K9 1392 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 SMARCA5O60264 1052 aaPredicted RBP12.91□□□□□ -0.34
FN1-204ENST00000356005 TRIM27P14373 513 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 KIF22Q14807 665 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 NOD1Q9Y239 953 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 BMS1Q14692 1282 aaKnown RBP12.91□□□□□ -0.34
FN1-204ENST00000356005 SLC26A6Q9BXS9 759 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 EFCAB6Q5THR3 1501 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 RNMTO43148 476 aaKnown RBP12.91□□□□□ -0.34
FN1-204ENST00000356005 PHACTR2O75167 634 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 RBM25P49756 843 aaKnown RBP12.91□□□□□ -0.34
FN1-204ENST00000356005 KDM5DQ9BY66 1539 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 RIMBP2O15034 1052 aa12.91□□□□□ -0.34
FN1-204ENST00000356005 SPC24Q8NBT2 197 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 STK24Q9Y6E0 443 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 PREX2Q70Z35 1606 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 DKC1O60832 514 aaKnown RBP eCLIP12.9□□□□□ -0.342e-32■□□□□ 9.9
FN1-204ENST00000356005 KLHL10Q6JEL2 608 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 GOPCQ9HD26 462 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 RBM28Q9NW13 759 aaKnown RBP12.9□□□□□ -0.34
FN1-204ENST00000356005 MCM9Q9NXL9 1143 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 HEATR3Q7Z4Q2 680 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 KRT13P13646 458 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 NAPAP54920 295 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 FMNL3Q8IVF7 1028 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 MSANTD4Q8NCY6 345 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 TBC1D22AQ8WUA7 517 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 SNRKQ9NRH2 765 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 PAG1Q9NWQ8 432 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 TARBP1Q13395 1621 aaKnown RBP12.9□□□□□ -0.34
FN1-204ENST00000356005 HOXC9P31274 260 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 LMBR1LQ6UX01 489 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 RXRBP28702 533 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 MTIF2P46199 727 aaKnown RBP12.9□□□□□ -0.34
FN1-204ENST00000356005 CCDC40Q4G0X9 1142 aa12.9□□□□□ -0.34
FN1-204ENST00000356005 KIF2AO00139 706 aaPredicted RBP12.9□□□□□ -0.35
FN1-204ENST00000356005 SLC9C2Q5TAH2 1124 aa12.9□□□□□ -0.35
FN1-204ENST00000356005 TCERG1LQ5VWI1 586 aa12.9□□□□□ -0.35
FN1-204ENST00000356005 PRKCSHP14314 528 aaPredicted RBP12.89□□□□□ -0.35
FN1-204ENST00000356005 CEP83Q9Y592 693 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 CCT2P78371 535 aaKnown RBP12.89□□□□□ -0.35
FN1-204ENST00000356005 SKIDA1Q1XH10 827 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 PUF60Q9UHX1 559 aaKnown RBP12.89□□□□□ -0.35
FN1-204ENST00000356005 COMMD10Q9Y6G5 202 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 SH3TC1Q8TE82 1336 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 UGGT1Q9NYU2 1555 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 ACTN2P35609 894 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 UFL1O94874 794 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 MAGEB6Q8N7X4 407 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.89□□□□□ -0.35
FN1-204ENST00000356005 ZSCAN12O43309 604 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 PDE8AO60658 829 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 PUM3Q15397 648 aaKnown RBP12.89□□□□□ -0.35
FN1-204ENST00000356005 SLC4A8Q2Y0W8 1093 aa12.89□□□□□ -0.35
FN1-204ENST00000356005 TTC41PQ6P2S7 1318 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms