RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 PTH1RQ03431 593 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 IMMTQ16891 758 aaKnown RBP4.4□□□□□ -1.7
RNF38-203ENST00000353739 ZMYM1Q5SVZ6 1142 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 IFFO2Q5TF58 517 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 LARP1BQ659C4 914 aaKnown RBP4.4□□□□□ -1.7
RNF38-203ENST00000353739 NAA16Q6N069 864 aaPredicted RBP4.4□□□□□ -1.7
RNF38-203ENST00000353739 NOL8Q76FK4 1167 aaKnown RBP4.4□□□□□ -1.7
RNF38-203ENST00000353739 ZSCAN30Q86W11 494 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 CCDC83Q8IWF9 413 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 UPF3BQ9BZI7 483 aaKnown RBP4.4□□□□□ -1.7
RNF38-203ENST00000353739 BCL11BQ9C0K0 894 aaPredicted RBP4.4□□□□□ -1.7
RNF38-203ENST00000353739 ZMYM6O95789 1325 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 IGSF3O75054 1194 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 CDKL5O76039 1030 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 TPM2P07951 284 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 USP48Q86UV5 1035 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 NRAPQ86VF7 1730 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 GPT2Q8TD30 523 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 DBNLQ9UJU6 430 aaKnown RBP4.4□□□□□ -1.7
RNF38-203ENST00000353739 TBC1D2BQ9UPU7 963 aa4.4□□□□□ -1.7
RNF38-203ENST00000353739 ESPNB1AK53 854 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 TULP1O00294 542 aaPredicted RBP4.4□□□□□ -1.71
RNF38-203ENST00000353739 SYT1P21579 422 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 TERF1P54274 439 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 PARP10Q53GL7 1025 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 CABLES1Q8TDN4 633 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 SMARCC1Q92922 1105 aaPredicted RBP4.4□□□□□ -1.71
RNF38-203ENST00000353739 GTF3C6Q969F1 213 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 NEUROD6Q96NK8 337 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 ROBO1Q9Y6N7 1651 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 ITGB4P16144 1822 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 A0A0D9SFI3 127 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 PFKFB2O60825 505 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 CCDC192P0DO97 292 aa4.4□□□□□ -1.71
RNF38-203ENST00000353739 DHX32Q7L7V1 743 aaKnown RBP4.4□□□□□ -1.71
RNF38-203ENST00000353739 ZNF274Q96GC6 653 aaPredicted RBP4.4□□□□□ -1.71
RNF38-203ENST00000353739 BCL9O00512 1426 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 COL16A1Q07092 1604 aaPredicted RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 EXOC5O00471 708 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 PDE8AO60658 829 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 IL6STP40189 918 aaPredicted RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 NT5C2P49902 561 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 FAM227BQ96M60 508 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 STRN4Q9NRL3 753 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 ZNF652Q9Y2D9 606 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 RTL9Q8NET4 1388 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 PHLPP1O60346 1717 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 DOT1LQ8TEK3 1739 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 VPS37CA5D8V6 355 aaPredicted RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 PTMAP06454 111 aaKnown RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 CSF1RP07333 972 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 ATG9AQ7Z3C6 839 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 RASEFQ8IZ41 740 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 DDX54Q8TDD1 881 aaKnown RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 MTMR6Q9Y217 621 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 SYCE3A1L190 88 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 NBPF26B4DH59 902 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 ATP5J2-PTCD1G3V325 749 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 PTCD1O75127 700 aaKnown RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 SLC5A1P13866 664 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 GNAT2P19087 354 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 EPHA10Q5JZY3 1008 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 NBPF14Q5TI25 921 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 NBPF10Q6P3W6 841 aaKnown RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 CPLX2Q6PUV4 134 aaKnown RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 GIGYF2Q6Y7W6 1299 aaKnown RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 NBPF15Q8N660 670 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 CDC5LQ99459 802 aaKnown RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 DBNDD2Q9BQY9 259 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 NOL10Q9BSC4 688 aaKnown RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 TLR7Q9NYK1 1049 aaKnown RBP4.39□□□□□ -1.71
RNF38-203ENST00000353739 USP25Q9UHP3 1055 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 LAMA4Q16363 1823 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 CTSWP56202 376 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 KIAA2012Q0VF49 1180 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 TRDNQ13061 729 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 ME3Q16798 604 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 APPBP2Q92624 585 aa4.39□□□□□ -1.71
RNF38-203ENST00000353739 BCORQ6W2J9 1755 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 MYH3P11055 1940 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 TIAM2Q8IVF5 1701 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 A0A1B0GUL7 405 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 GOLIM4O00461 696 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 Q6ZUG5 572 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 RALYLQ86SE5 291 aaKnown RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 WASF1Q92558 559 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 DDX17Q92841 729 aaKnown RBP4.38□□□□□ -1.71
RNF38-203ENST00000353739 PDLIM2Q96JY6 352 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 SPATA32Q96LK8 384 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 MTA3Q9BTC8 594 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 NUP62CLQ9H1M0 184 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 CNNM1Q9NRU3 951 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 DUOX1Q9NRD9 1551 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 TPM4P67936 248 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 MAP3K11Q16584 847 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 ATP2B3Q16720 1220 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 METTL24Q5JXM2 366 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 NCOA7Q8NI08 942 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 ZBTB3Q9H5J0 574 aa4.38□□□□□ -1.71
RNF38-203ENST00000353739 CNNM2Q9H8M5 875 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms