RNA–Protein interactions for RNA: ENST00000353487.6

SPPL3-201, Transcript of signal peptide peptidase like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPPL3, Length 4,148 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-201ENST00000353487 C8orf76Q96K31 380 aa16.52■□□□□ 0.24
SPPL3-201ENST00000353487 RRP15Q9Y3B9 282 aaKnown RBP16.52■□□□□ 0.24
SPPL3-201ENST00000353487 CAVIN2O95810 425 aa16.52■□□□□ 0.23
SPPL3-201ENST00000353487 SMC1AQ14683 1233 aaKnown RBP16.52■□□□□ 0.23
SPPL3-201ENST00000353487 FAM227BQ96M60 508 aa16.52■□□□□ 0.23
SPPL3-201ENST00000353487 GDAP1L1Q96MZ0 367 aa16.52■□□□□ 0.23
SPPL3-201ENST00000353487 LZTFL1Q9NQ48 299 aa16.52■□□□□ 0.23
SPPL3-201ENST00000353487 DDX41Q9UJV9 622 aaKnown RBP16.52■□□□□ 0.23
SPPL3-201ENST00000353487 RTL1A6NKG5 1358 aa16.52■□□□□ 0.23
SPPL3-201ENST00000353487 GCKP35557 465 aa16.51■□□□□ 0.23
SPPL3-201ENST00000353487 FKBP4Q02790 459 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPPL3-201ENST00000353487 RBM33Q96EV2 1170 aaKnown RBP16.51■□□□□ 0.23
SPPL3-201ENST00000353487 PHF23Q9BUL5 403 aaPredicted RBP16.51■□□□□ 0.23
SPPL3-201ENST00000353487 PHAXQ9H814 394 aaKnown RBP16.51■□□□□ 0.23
SPPL3-201ENST00000353487 HAND2P61296 217 aa16.51■□□□□ 0.23
SPPL3-201ENST00000353487 SAFBQ15424 915 aaKnown RBP eCLIP16.51■□□□□ 0.23
SPPL3-201ENST00000353487 ICE2Q659A1 982 aa16.51■□□□□ 0.23
SPPL3-201ENST00000353487 NBPF11Q86T75 865 aa16.51■□□□□ 0.23
SPPL3-201ENST00000353487 HYPKQ9NX55 129 aa16.51■□□□□ 0.23
SPPL3-201ENST00000353487 MYO1CO00159 1063 aa16.51■□□□□ 0.23
SPPL3-201ENST00000353487 PTH1RQ03431 593 aa16.51■□□□□ 0.23
SPPL3-201ENST00000353487 GNAT3A8MTJ3 354 aa16.51■□□□□ 0.23
SPPL3-201ENST00000353487 ERLIN2O94905 339 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 PPP2R3AQ06190 1150 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 RAD51AP2Q09MP3 1159 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 KMT5BQ4FZB7 885 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 NUP133Q8WUM0 1156 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 CCDC114Q96M63 670 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 USP27XA6NNY8 438 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 CEBPAP49715 358 aaPredicted RBP16.5■□□□□ 0.23
SPPL3-201ENST00000353487 ZNF622Q969S3 477 aaKnown RBP eCLIP16.5■□□□□ 0.23
SPPL3-201ENST00000353487 TRIM66O15016 1216 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 OTUD7BQ6GQQ9 843 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 ERVK-7P63135 1459 aa16.5■□□□□ 0.23
SPPL3-201ENST00000353487 A0A1B0GUA9 196 aa16.49■□□□□ 0.23
SPPL3-201ENST00000353487 DDX46Q7L014 1031 aaKnown RBP16.49■□□□□ 0.23
SPPL3-201ENST00000353487 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.49■□□□□ 0.23
SPPL3-201ENST00000353487 INPP5BP32019 993 aa16.49■□□□□ 0.23
SPPL3-201ENST00000353487 EIF4A2Q14240 407 aaKnown RBP16.49■□□□□ 0.23
SPPL3-201ENST00000353487 JMYQ8N9B5 988 aa16.49■□□□□ 0.23
SPPL3-201ENST00000353487 SPTLC3Q9NUV7 552 aa16.49■□□□□ 0.23
SPPL3-201ENST00000353487 IQGAP3Q86VI3 1631 aa16.49■□□□□ 0.23
SPPL3-201ENST00000353487 ENOX2Q16206 610 aaKnown RBP16.49■□□□□ 0.23
SPPL3-201ENST00000353487 MAP9Q49MG5 647 aa16.49■□□□□ 0.23
SPPL3-201ENST00000353487 MICALCLQ6ZW33 695 aa16.49■□□□□ 0.23
SPPL3-201ENST00000353487 MRPS27Q92552 414 aaKnown RBP16.49■□□□□ 0.23
SPPL3-201ENST00000353487 NDUFB9Q9Y6M9 179 aa16.49■□□□□ 0.23
SPPL3-201ENST00000353487 ZFYVE16Q7Z3T8 1539 aa16.48■□□□□ 0.23
SPPL3-201ENST00000353487 CCDC85AQ96PX6 553 aaPredicted RBP16.48■□□□□ 0.23
SPPL3-201ENST00000353487 ZCCHC17Q9NP64 241 aaKnown RBP16.48■□□□□ 0.23
SPPL3-201ENST00000353487 SOS1Q07889 1333 aaPredicted RBP16.48■□□□□ 0.23
SPPL3-201ENST00000353487 DHX16O60231 1041 aaKnown RBP16.48■□□□□ 0.23
SPPL3-201ENST00000353487 TPCN1Q9ULQ1 816 aa16.48■□□□□ 0.23
SPPL3-201ENST00000353487 MYO6Q9UM54 1294 aa16.48■□□□□ 0.23
SPPL3-201ENST00000353487 KIAA1328Q86T90 577 aa16.48■□□□□ 0.23
SPPL3-201ENST00000353487 CCDC144CPQ8IYA2 1237 aa16.48■□□□□ 0.23
SPPL3-201ENST00000353487 XPO4Q9C0E2 1151 aaKnown RBP16.48■□□□□ 0.23
SPPL3-201ENST00000353487 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.48■□□□□ 0.23
SPPL3-201ENST00000353487 NCOA3Q9Y6Q9 1424 aa16.48■□□□□ 0.23
SPPL3-201ENST00000353487 CLTCL1P53675 1640 aa16.48■□□□□ 0.23
SPPL3-201ENST00000353487 ABTB2Q8N961 1025 aa16.47■□□□□ 0.23
SPPL3-201ENST00000353487 ZSCAN16Q9H4T2 348 aaPredicted RBP16.47■□□□□ 0.23
SPPL3-201ENST00000353487 NCOA5Q9HCD5 579 aaKnown RBP16.47■□□□□ 0.23
SPPL3-201ENST00000353487 APOBRQ0VD83 1088 aa16.47■□□□□ 0.23
SPPL3-201ENST00000353487 CNNM3Q8NE01 707 aa16.47■□□□□ 0.23
SPPL3-201ENST00000353487 EFCC1Q9HA90 598 aa16.47■□□□□ 0.23
SPPL3-201ENST00000353487 UNC13BO14795 1591 aa16.47■□□□□ 0.23
SPPL3-201ENST00000353487 CCDC144BQ3MJ40 725 aa16.47■□□□□ 0.23
SPPL3-201ENST00000353487 INCENPQ9NQS7 918 aa16.47■□□□□ 0.23
SPPL3-201ENST00000353487 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.47■□□□□ 0.23
SPPL3-201ENST00000353487 BIRC2Q13490 618 aa16.47■□□□□ 0.23
SPPL3-201ENST00000353487 MTHFSDQ2M296 383 aaKnown RBP16.47■□□□□ 0.23
SPPL3-201ENST00000353487 TEX2Q8IWB9 1127 aa16.47■□□□□ 0.23
SPPL3-201ENST00000353487 FTOQ9C0B1 505 aaKnown RBP eCLIP16.47■□□□□ 0.23
SPPL3-201ENST00000353487 GOLGA8FQ08AF8 430 aa16.46■□□□□ 0.23
SPPL3-201ENST00000353487 GOLGA8DPQ0D2H9 430 aa16.46■□□□□ 0.23
SPPL3-201ENST00000353487 C11orf57Q6ZUT1 292 aaPredicted RBP16.46■□□□□ 0.23
SPPL3-201ENST00000353487 CCDC148Q8NFR7 591 aa16.46■□□□□ 0.23
SPPL3-201ENST00000353487 WASLO00401 505 aaPredicted RBP16.46■□□□□ 0.23
SPPL3-201ENST00000353487 ZNF530Q6P9A1 599 aaPredicted RBP16.46■□□□□ 0.22
SPPL3-201ENST00000353487 MICAL1Q8TDZ2 1067 aa16.46■□□□□ 0.22
SPPL3-201ENST00000353487 UHRF1BP1LA0JNW5 1464 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 IL13P35225 146 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 CCDC129Q6ZRS4 1044 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 EPC1Q9H2F5 836 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 ORC3Q9UBD5 711 aaPredicted RBP16.45■□□□□ 0.22
SPPL3-201ENST00000353487 RGS12O14924 1447 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 YEATS2Q9ULM3 1422 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 BTBD11A6QL63 1104 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 ECM2O94769 699 aaPredicted RBP16.45■□□□□ 0.22
SPPL3-201ENST00000353487 NBPF7P0C2Y1 421 aaPredicted RBP16.45■□□□□ 0.22
SPPL3-201ENST00000353487 PSME1Q06323 249 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 GOLGA1Q92805 767 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 CHPF2Q9P2E5 772 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 CCDC172P0C7W6 258 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 CLCN6P51797 869 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 PIK3R5Q8WYR1 880 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 TRPM2O94759 1503 aa16.45■□□□□ 0.22
SPPL3-201ENST00000353487 PLXNC1O60486 1568 aa16.44■□□□□ 0.22
SPPL3-201ENST00000353487 MAATS1Q7Z4T9 603 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms