RNA–Protein interactions for RNA: ENST00000350199.8

RNF38-202, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 5,104 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-202ENST00000350199 FAM227BQ96M60 508 aa22.58■■□□□ 1.21
RNF38-202ENST00000350199 CRNKL1Q9BZJ0 848 aaKnown RBP22.58■■□□□ 1.2
RNF38-202ENST00000350199 CPSF1Q10570 1443 aaKnown RBP22.58■■□□□ 1.2
RNF38-202ENST00000350199 ZC3H13Q5T200 1668 aaKnown RBP22.57■■□□□ 1.2
RNF38-202ENST00000350199 CKAP2LQ8IYA6 745 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 ZNF219Q9P2Y4 722 aaPredicted RBP22.57■■□□□ 1.2
RNF38-202ENST00000350199 NRXN1Q9ULB1 1477 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 PDE8AO60658 829 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 FAM98CQ17RN3 349 aaKnown RBP22.57■■□□□ 1.2
RNF38-202ENST00000350199 IBTKQ9P2D0 1353 aaPredicted RBP22.57■■□□□ 1.2
RNF38-202ENST00000350199 PDE4BQ07343 736 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 TTLL7Q6ZT98 887 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 CCDC87Q9NVE4 849 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 TMOD2Q9NZR1 351 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 ADGRL3Q9HAR2 1447 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 GNPATO15228 680 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 CRACR2BQ8N4Y2 399 aaPredicted RBP22.57■■□□□ 1.2
RNF38-202ENST00000350199 KRT23Q9C075 422 aa22.57■■□□□ 1.2
RNF38-202ENST00000350199 ZSCAN16Q9H4T2 348 aaPredicted RBP22.57■■□□□ 1.2
RNF38-202ENST00000350199 PRAMEF22A3QJZ6 481 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 TSPY2A6NKD2 308 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 NAA16Q6N069 864 aaPredicted RBP22.56■■□□□ 1.2
RNF38-202ENST00000350199 CARD10Q9BWT7 1032 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 BCL11BQ9C0K0 894 aaPredicted RBP22.56■■□□□ 1.2
RNF38-202ENST00000350199 CNPY2Q9Y2B0 182 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 ESPNB1AK53 854 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 NOC3LQ8WTT2 800 aaKnown RBP22.56■■□□□ 1.2
RNF38-202ENST00000350199 HELLSQ9NRZ9 838 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 DDX19AQ9NUU7 478 aaKnown RBP22.56■■□□□ 1.2
RNF38-202ENST00000350199 CCDC129Q6ZRS4 1044 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 DLC1Q96QB1 1528 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 PRC1O43663 620 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 TCIRG1Q13488 830 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 SLC4A8Q2Y0W8 1093 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 XAGE2Q96GT9 111 aa22.56■■□□□ 1.2
RNF38-202ENST00000350199 FSIP1Q8NA03 581 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 SLC26A6Q9BXS9 759 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 SEC63Q9UGP8 760 aaKnown RBP22.55■■□□□ 1.2
RNF38-202ENST00000350199 KIAA1210Q9ULL0 1709 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 F13A1P00488 732 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 WTAPQ15007 396 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 CHST3Q7LGC8 479 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 WDR17Q8IZU2 1322 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 CNNM2Q9H8M5 875 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 ZBTB43O43298 467 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 MAGEB6Q8N7X4 407 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 SNX14Q9Y5W7 946 aa22.55■■□□□ 1.2
RNF38-202ENST00000350199 MAGEC2Q9UBF1 373 aaPredicted RBP22.54■■□□□ 1.2
RNF38-202ENST00000350199 NDUFB9Q9Y6M9 179 aa22.54■■□□□ 1.2
RNF38-202ENST00000350199 ERBB4Q15303 1308 aa22.54■■□□□ 1.2
RNF38-202ENST00000350199 ZSCAN23Q3MJ62 389 aa22.54■■□□□ 1.2
RNF38-202ENST00000350199 DHX32Q7L7V1 743 aaKnown RBP22.54■■□□□ 1.2
RNF38-202ENST00000350199 KRT18P05783 430 aaKnown RBP22.54■■□□□ 1.2
RNF38-202ENST00000350199 HSP90AA2PQ14568 343 aaPredicted RBP22.54■■□□□ 1.2
RNF38-202ENST00000350199 IQGAP1P46940 1657 aa22.54■■□□□ 1.2
RNF38-202ENST00000350199 USP48Q86UV5 1035 aa22.53■■□□□ 1.2
RNF38-202ENST00000350199 CEP89Q96ST8 783 aa22.53■■□□□ 1.2
RNF38-202ENST00000350199 PTCH1Q13635 1447 aa22.53■■□□□ 1.2
RNF38-202ENST00000350199 CCAR1Q8IX12 1150 aaKnown RBP22.53■■□□□ 1.2
RNF38-202ENST00000350199 ESR2Q92731 530 aa22.53■■□□□ 1.2
RNF38-202ENST00000350199 ANO10Q9NW15 660 aa22.53■■□□□ 1.2
RNF38-202ENST00000350199 ZNF335Q9H4Z2 1342 aaPredicted RBP22.53■■□□□ 1.2
RNF38-202ENST00000350199 LRRC7Q96NW7 1537 aa22.53■■□□□ 1.2
RNF38-202ENST00000350199 SLC27A2O14975 620 aa22.52■■□□□ 1.2
RNF38-202ENST00000350199 STIM1Q13586 685 aa22.52■■□□□ 1.2
RNF38-202ENST00000350199 SIRT2Q8IXJ6 389 aa22.52■■□□□ 1.2
RNF38-202ENST00000350199 MIGA1Q8NAN2 632 aa22.52■■□□□ 1.2
RNF38-202ENST00000350199 CCNL1Q9UK58 526 aaPredicted RBP22.52■■□□□ 1.2
RNF38-202ENST00000350199 CTAGE5O15320 804 aa22.52■■□□□ 1.2
RNF38-202ENST00000350199 APOBRQ0VD83 1088 aa22.52■■□□□ 1.2
RNF38-202ENST00000350199 KBTBD3Q8NAB2 608 aa22.52■■□□□ 1.2
RNF38-202ENST00000350199 EAF2Q96CJ1 260 aaPredicted RBP22.52■■□□□ 1.2
RNF38-202ENST00000350199 ZNF622Q969S3 477 aaKnown RBP eCLIP22.52■■□□□ 1.2
RNF38-202ENST00000350199 POLR1AO95602 1720 aaPredicted RBP22.52■■□□□ 1.2
RNF38-202ENST00000350199 SMTNL1A8MU46 457 aa22.51■■□□□ 1.19
RNF38-202ENST00000350199 EPS15P42566 896 aa22.51■■□□□ 1.19
RNF38-202ENST00000350199 NLRP5P59047 1200 aa22.51■■□□□ 1.19
RNF38-202ENST00000350199 GSTO1P78417 241 aa22.51■■□□□ 1.19
RNF38-202ENST00000350199 PUM3Q15397 648 aaKnown RBP22.51■■□□□ 1.19
RNF38-202ENST00000350199 USP31Q70CQ4 1352 aa22.51■■□□□ 1.19
RNF38-202ENST00000350199 DNM1Q05193 864 aaKnown RBP22.51■■□□□ 1.19
RNF38-202ENST00000350199 FILIP1Q7Z7B0 1213 aa22.51■■□□□ 1.19
RNF38-202ENST00000350199 MAGEB6P1A0A0J9YX57 407 aa22.51■■□□□ 1.19
RNF38-202ENST00000350199 BRINP3Q76B58 766 aa22.5■■□□□ 1.19
RNF38-202ENST00000350199 GNAT2P19087 354 aa22.5■■□□□ 1.19
RNF38-202ENST00000350199 KAT14Q9H8E8 782 aa22.5■■□□□ 1.19
RNF38-202ENST00000350199 KIF5BP33176 963 aa22.5■■□□□ 1.19
RNF38-202ENST00000350199 TMTC2Q8N394 836 aa22.5■■□□□ 1.19
RNF38-202ENST00000350199 VWDEQ8N2E2 1590 aa22.5■■□□□ 1.19
RNF38-202ENST00000350199 AXIN2Q9Y2T1 843 aa22.5■■□□□ 1.19
RNF38-202ENST00000350199 CBFA2T2O43439 604 aa22.49■■□□□ 1.19
RNF38-202ENST00000350199 ATP5JP18859 108 aa22.49■■□□□ 1.19
RNF38-202ENST00000350199 ADGRB1O14514 1584 aa22.49■■□□□ 1.19
RNF38-202ENST00000350199 DIP2BQ9P265 1576 aa22.49■■□□□ 1.19
RNF38-202ENST00000350199 TRAPPC3LQ5T215 181 aa22.49■■□□□ 1.19
RNF38-202ENST00000350199 ALG1Q9BT22 464 aa22.49■■□□□ 1.19
RNF38-202ENST00000350199 A0A0U1RQG5 324 aaPredicted RBP22.49■■□□□ 1.19
RNF38-202ENST00000350199 RPS6KB1P23443 525 aa22.49■■□□□ 1.19
RNF38-202ENST00000350199 HSPA4P34932 840 aa22.48■■□□□ 1.19
RNF38-202ENST00000350199 USP25Q9UHP3 1055 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms