RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CTCFLQ8NI51 663 aaPredicted RBP14.21□□□□□ -0.13
SMAD9-201ENST00000350148 PANK2Q9BZ23 570 aa14.21□□□□□ -0.13
SMAD9-201ENST00000350148 NRKQ7Z2Y5 1582 aa14.21□□□□□ -0.13
SMAD9-201ENST00000350148 CCDC171Q6TFL3 1326 aa14.21□□□□□ -0.13
SMAD9-201ENST00000350148 FAM98CQ17RN3 349 aaKnown RBP14.21□□□□□ -0.13
SMAD9-201ENST00000350148 ATG3Q9NT62 314 aa14.21□□□□□ -0.13
SMAD9-201ENST00000350148 DENND2AQ9ULE3 1009 aa14.21□□□□□ -0.13
SMAD9-201ENST00000350148 ITGA6P23229 1130 aa14.21□□□□□ -0.13
SMAD9-201ENST00000350148 MFSD6Q6ZSS7 791 aa14.21□□□□□ -0.13
SMAD9-201ENST00000350148 MKNK2Q9HBH9 465 aa14.21□□□□□ -0.13
SMAD9-201ENST00000350148 STAP2Q9UGK3 403 aa14.21□□□□□ -0.13
SMAD9-201ENST00000350148 ZBTB38Q8NAP3 1195 aaPredicted RBP14.21□□□□□ -0.14
SMAD9-201ENST00000350148 COPRSQ9NQ92 184 aa14.21□□□□□ -0.14
SMAD9-201ENST00000350148 SNRKQ9NRH2 765 aa14.21□□□□□ -0.14
SMAD9-201ENST00000350148 TRPC5Q9UL62 973 aaPredicted RBP14.21□□□□□ -0.14
SMAD9-201ENST00000350148 GNPATO15228 680 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 ATP5JP18859 108 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 ZNF444Q8N0Y2 327 aaPredicted RBP14.2□□□□□ -0.14
SMAD9-201ENST00000350148 RBM17Q96I25 401 aaKnown RBP14.2□□□□□ -0.14
SMAD9-201ENST00000350148 PLCG2P16885 1265 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 IFIT3O14879 490 aaKnown RBP14.2□□□□□ -0.14
SMAD9-201ENST00000350148 CATIPQ7Z7H3 387 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 TMX3Q96JJ7 454 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 ZSCAN16Q9H4T2 348 aaPredicted RBP14.2□□□□□ -0.14
SMAD9-201ENST00000350148 MINDY4BA8MYZ0 360 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 C6orf229H3BNL8 230 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 RBM5P52756 815 aaKnown RBP eCLIP14.2□□□□□ -0.14
SMAD9-201ENST00000350148 CCDC39Q9UFE4 941 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 ERVV-1B6SEH8 477 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 CIAO1O76071 339 aa14.2□□□□□ -0.14
SMAD9-201ENST00000350148 KIF5BP33176 963 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 FLAD1Q8NFF5 587 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 LPIN2Q92539 896 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 C8orf76Q96K31 380 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 A0A1B0GUL7 405 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 ME1P48163 572 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 KLHL34Q8N239 644 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 FAM89AQ96GI7 184 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 IKQ13123 557 aaPredicted RBP14.19□□□□□ -0.14
SMAD9-201ENST00000350148 UBR1Q8IWV7 1749 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 GOLGA8AA7E2F4 631 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 GOLGA8BA8MQT2 603 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 SSRP1Q08945 709 aaKnown RBP14.19□□□□□ -0.14
SMAD9-201ENST00000350148 CCDC173Q0VFZ6 552 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 CRB1P82279 1406 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 PLEKHG2Q9H7P9 1386 aa14.19□□□□□ -0.14
SMAD9-201ENST00000350148 CD163L1Q9NR16 1453 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 OVOS2A0A0G2JMS6 1433 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 TEX35Q5T0J7 233 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 SLC9C2Q5TAH2 1124 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 UNC5CLQ8IV45 518 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 EYA3Q99504 573 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 TNMDQ9H2S6 317 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 STX6O43752 255 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 CYP7A1P22680 504 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 NAA16Q6N069 864 aaPredicted RBP14.18□□□□□ -0.14
SMAD9-201ENST00000350148 NOC3LQ8WTT2 800 aaKnown RBP14.18□□□□□ -0.14
SMAD9-201ENST00000350148 PRDM10Q9NQV6 1147 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 PARP3Q9Y6F1 533 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 SGSM2O43147 1006 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 TNPO1Q92973 898 aaKnown RBP14.18□□□□□ -0.14
SMAD9-201ENST00000350148 CREB3L3Q68CJ9 461 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 KBTBD3Q8NAB2 608 aa14.18□□□□□ -0.14
SMAD9-201ENST00000350148 GIGYF2Q6Y7W6 1299 aaKnown RBP14.17□□□□□ -0.14
SMAD9-201ENST00000350148 ESR2Q92731 530 aa14.17□□□□□ -0.14
SMAD9-201ENST00000350148 TULP1O00294 542 aaPredicted RBP14.17□□□□□ -0.14
SMAD9-201ENST00000350148 TMEM67Q5HYA8 995 aa14.17□□□□□ -0.14
SMAD9-201ENST00000350148 CNBD1Q8NA66 436 aa14.17□□□□□ -0.14
SMAD9-201ENST00000350148 CTAGE5O15320 804 aa14.17□□□□□ -0.14
SMAD9-201ENST00000350148 CTSWP56202 376 aa14.17□□□□□ -0.14
SMAD9-201ENST00000350148 NUP62CLQ9H1M0 184 aa14.17□□□□□ -0.14
SMAD9-201ENST00000350148 GJB2P29033 226 aa14.16□□□□□ -0.14
SMAD9-201ENST00000350148 CCDC12Q8WUD4 166 aaPredicted RBP14.16□□□□□ -0.14
SMAD9-201ENST00000350148 RBM27Q9P2N5 1060 aaKnown RBP14.16□□□□□ -0.14
SMAD9-201ENST00000350148 ADGRB2O60241 1585 aa14.16□□□□□ -0.14
SMAD9-201ENST00000350148 LOC102724428A0A0B4J2F2 783 aa14.16□□□□□ -0.14
SMAD9-201ENST00000350148 HLA-DOAP06340 250 aa14.16□□□□□ -0.14
SMAD9-201ENST00000350148 SIK1P57059 783 aa14.16□□□□□ -0.14
SMAD9-201ENST00000350148 BBXQ8WY36 941 aaPredicted RBP14.16□□□□□ -0.14
SMAD9-201ENST00000350148 APPBP2Q92624 585 aa14.16□□□□□ -0.14
SMAD9-201ENST00000350148 XAGE2Q96GT9 111 aa14.16□□□□□ -0.14
SMAD9-201ENST00000350148 CPDO75976 1380 aa14.16□□□□□ -0.14
SMAD9-201ENST00000350148 ATP10DQ9P241 1426 aa14.16□□□□□ -0.14
SMAD9-201ENST00000350148 ZSCAN29Q8IWY8 852 aaPredicted RBP14.16□□□□□ -0.14
SMAD9-201ENST00000350148 COL3A1P02461 1466 aaPredicted RBP14.15□□□□□ -0.14
SMAD9-201ENST00000350148 MAGEB6P1A0A0J9YX57 407 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 RANBP6O60518 1105 aaKnown RBP14.15□□□□□ -0.14
SMAD9-201ENST00000350148 CALM1P0DP23 149 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 CALM2P0DP24 149 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 CALM3P0DP25 149 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 TM6SF1Q9BZW5 370 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 GRPEL1Q9HAV7 217 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 SEC63Q9UGP8 760 aaKnown RBP14.15□□□□□ -0.14
SMAD9-201ENST00000350148 AXIN2Q9Y2T1 843 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 SLC4A4Q9Y6R1 1079 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 CYP27B1O15528 508 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 GNAQP50148 359 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 TAF3Q5VWG9 929 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 RUFY3Q7L099 469 aa14.15□□□□□ -0.14
SMAD9-201ENST00000350148 CDK5RAP3Q96JB5 506 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms