RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 RTL5Q5HYW3 569 aaPredicted RBP24.15■■□□□ 1.46
KDM5C-201ENST00000349663 ZC3H12CQ9C0D7 883 aaKnown RBP24.15■■□□□ 1.46
KDM5C-201ENST00000349663 LRRC37AA6NMS7 1700 aa24.15■■□□□ 1.46
KDM5C-201ENST00000349663 RTL9Q8NET4 1388 aa24.15■■□□□ 1.46
KDM5C-201ENST00000349663 VIL1P09327 827 aaKnown RBP24.14■■□□□ 1.45
KDM5C-201ENST00000349663 HOXB7P09629 217 aa24.14■■□□□ 1.45
KDM5C-201ENST00000349663 IRS4O14654 1257 aaPredicted RBP24.13■■□□□ 1.45
KDM5C-201ENST00000349663 TRPA1O75762 1119 aa24.13■■□□□ 1.45
KDM5C-201ENST00000349663 TRIM28Q13263 835 aaKnown RBP24.13■■□□□ 1.45
KDM5C-201ENST00000349663 RALBP1Q15311 655 aa24.13■■□□□ 1.45
KDM5C-201ENST00000349663 KIF4BQ2VIQ3 1234 aa24.13■■□□□ 1.45
KDM5C-201ENST00000349663 SULF1Q8IWU6 871 aa24.13■■□□□ 1.45
KDM5C-201ENST00000349663 RNF186Q9NXI6 227 aa24.13■■□□□ 1.45
KDM5C-201ENST00000349663 HYPKQ9NX55 129 aa24.12■■□□□ 1.45
KDM5C-201ENST00000349663 POLR2AP24928 1970 aaKnown RBP24.11■■□□□ 1.45
KDM5C-201ENST00000349663 DDX60Q8IY21 1712 aaKnown RBP24.11■■□□□ 1.45
KDM5C-201ENST00000349663 G3V3G9 751 aa24.11■■□□□ 1.45
KDM5C-201ENST00000349663 DCAF8Q5TAQ9 597 aa24.11■■□□□ 1.45
KDM5C-201ENST00000349663 CCDC146Q8IYE0 955 aa24.11■■□□□ 1.45
KDM5C-201ENST00000349663 GGA3Q9NZ52 723 aa24.11■■□□□ 1.45
KDM5C-201ENST00000349663 PODXL2Q9NZ53 605 aa24.11■■□□□ 1.45
KDM5C-201ENST00000349663 TRIM35Q9UPQ4 493 aa24.11■■□□□ 1.45
KDM5C-201ENST00000349663 CSRNP1Q96S65 589 aa24.1■■□□□ 1.45
KDM5C-201ENST00000349663 SLC10A3P09131 477 aa24.09■■□□□ 1.45
KDM5C-201ENST00000349663 HSP90B1P14625 803 aaKnown RBP24.09■■□□□ 1.45
KDM5C-201ENST00000349663 ANKIB1Q9P2G1 1089 aa24.09■■□□□ 1.45
KDM5C-201ENST00000349663 UFL1O94874 794 aa24.08■■□□□ 1.45
KDM5C-201ENST00000349663 CDCA5Q96FF9 252 aa24.08■■□□□ 1.45
KDM5C-201ENST00000349663 ASTN2O75129 1339 aaPredicted RBP24.08■■□□□ 1.44
KDM5C-201ENST00000349663 SCARF1Q14162 830 aa24.07■■□□□ 1.44
KDM5C-201ENST00000349663 DUSP27Q5VZP5 1158 aa24.07■■□□□ 1.44
KDM5C-201ENST00000349663 RIC3Q7Z5B4 369 aa24.07■■□□□ 1.44
KDM5C-201ENST00000349663 REM2Q8IYK8 340 aaPredicted RBP24.07■■□□□ 1.44
KDM5C-201ENST00000349663 ZBTB38Q8NAP3 1195 aaPredicted RBP24.07■■□□□ 1.44
KDM5C-201ENST00000349663 RUNDC1Q96C34 613 aa24.07■■□□□ 1.44
KDM5C-201ENST00000349663 SEC31BQ9NQW1 1179 aa24.07■■□□□ 1.44
KDM5C-201ENST00000349663 GGA1Q9UJY5 639 aa24.07■■□□□ 1.44
KDM5C-201ENST00000349663 COL4A1P02462 1669 aa24.06■■□□□ 1.44
KDM5C-201ENST00000349663 ZNF280AP59817 542 aaPredicted RBP24.06■■□□□ 1.44
KDM5C-201ENST00000349663 RSBN1LQ6PCB5 846 aaPredicted RBP24.06■■□□□ 1.44
KDM5C-201ENST00000349663 AGBL3Q8NEM8 1001 aa24.06■■□□□ 1.44
KDM5C-201ENST00000349663 PCDH10Q9P2E7 1040 aa24.06■■□□□ 1.44
KDM5C-201ENST00000349663 ANGEL2Q5VTE6 544 aaKnown RBP24.05■■□□□ 1.44
KDM5C-201ENST00000349663 PDE4DIPQ5VU43 2346 aa24.04■■□□□ 1.44
KDM5C-201ENST00000349663 SOX10P56693 466 aa24.04■■□□□ 1.44
KDM5C-201ENST00000349663 GOLGA2Q08379 1002 aa24.04■■□□□ 1.44
KDM5C-201ENST00000349663 FKBP1BP68106 108 aa24.03■■□□□ 1.44
KDM5C-201ENST00000349663 CCDC152Q4G0S7 254 aa24.03■■□□□ 1.44
KDM5C-201ENST00000349663 CTU1Q7Z7A3 348 aaKnown RBP24.03■■□□□ 1.44
KDM5C-201ENST00000349663 RASAL3Q86YV0 1011 aa24.02■■□□□ 1.44
KDM5C-201ENST00000349663 SCN9AQ15858 1988 aa24.02■■□□□ 1.43
KDM5C-201ENST00000349663 USP17L8P0C7I0 530 aa24.01■■□□□ 1.43
KDM5C-201ENST00000349663 WDR43Q15061 677 aaKnown RBP eCLIP24.01■■□□□ 1.43
KDM5C-201ENST00000349663 GMLQ99445 158 aa24.01■■□□□ 1.43
KDM5C-201ENST00000349663 MYD88Q99836 296 aa24.01■■□□□ 1.43
KDM5C-201ENST00000349663 MYOZ2Q9NPC6 264 aa24.01■■□□□ 1.43
KDM5C-201ENST00000349663 ZNF609O15014 1411 aa24.01■■□□□ 1.43
KDM5C-201ENST00000349663 PDE8AO60658 829 aa24■■□□□ 1.43
KDM5C-201ENST00000349663 PCCAP05165 728 aaPredicted RBP24■■□□□ 1.43
KDM5C-201ENST00000349663 CCDC191Q8NCU4 936 aa24■■□□□ 1.43
KDM5C-201ENST00000349663 PHAXQ9H814 394 aaKnown RBP24■■□□□ 1.43
KDM5C-201ENST00000349663 MBIPQ9NS73 344 aa24■■□□□ 1.43
KDM5C-201ENST00000349663 AKAP11Q9UKA4 1901 aa24■■□□□ 1.43
KDM5C-201ENST00000349663 USP17L3A6NCW0 530 aa23.99■■□□□ 1.43
KDM5C-201ENST00000349663 USP17L4A6NCW7 530 aa23.99■■□□□ 1.43
KDM5C-201ENST00000349663 USP17L1Q7RTZ2 530 aa23.99■■□□□ 1.43
KDM5C-201ENST00000349663 PODNQ7Z5L7 613 aa23.99■■□□□ 1.43
KDM5C-201ENST00000349663 XDHP47989 1333 aa23.99■■□□□ 1.43
KDM5C-201ENST00000349663 MYBBP1AQ9BQG0 1328 aaKnown RBP23.99■■□□□ 1.43
KDM5C-201ENST00000349663 PITPNM2Q9BZ72 1349 aa23.99■■□□□ 1.43
KDM5C-201ENST00000349663 ANKRD18AQ8IVF6 992 aa23.98■■□□□ 1.43
KDM5C-201ENST00000349663 CCDC85AQ96PX6 553 aaPredicted RBP23.98■■□□□ 1.43
KDM5C-201ENST00000349663 ADAMTS8Q9UP79 889 aa23.98■■□□□ 1.43
KDM5C-201ENST00000349663 ATP2B4P23634 1241 aa23.97■■□□□ 1.43
KDM5C-201ENST00000349663 JARID2Q92833 1246 aaPredicted RBP23.97■■□□□ 1.43
KDM5C-201ENST00000349663 CWC25Q9NXE8 425 aaPredicted RBP23.97■■□□□ 1.43
KDM5C-201ENST00000349663 UBE2Q2LH0YL09 131 aa23.95■■□□□ 1.42
KDM5C-201ENST00000349663 ELL2O00472 640 aaPredicted RBP23.95■■□□□ 1.42
KDM5C-201ENST00000349663 ZNF853P0CG23 659 aa23.95■■□□□ 1.42
KDM5C-201ENST00000349663 PKN2Q16513 984 aaKnown RBP23.95■■□□□ 1.42
KDM5C-201ENST00000349663 MOB2Q70IA6 237 aa23.95■■□□□ 1.42
KDM5C-201ENST00000349663 SCAF8Q9UPN6 1271 aaKnown RBP23.95■■□□□ 1.42
KDM5C-201ENST00000349663 HDAC9Q9UKV0 1011 aa23.94■■□□□ 1.42
KDM5C-201ENST00000349663 HPS5Q9UPZ3 1129 aa23.94■■□□□ 1.42
KDM5C-201ENST00000349663 NBPF9Q3BBW0 867 aa23.93■■□□□ 1.42
KDM5C-201ENST00000349663 PRAMEF18Q5VWM3 479 aa23.93■■□□□ 1.42
KDM5C-201ENST00000349663 METTL22Q9BUU2 404 aaPredicted RBP23.93■■□□□ 1.42
KDM5C-201ENST00000349663 PAPPA2Q9BXP8 1791 aa23.93■■□□□ 1.42
KDM5C-201ENST00000349663 TBC1D8O95759 1140 aa23.92■■□□□ 1.42
KDM5C-201ENST00000349663 DDX58O95786 925 aaKnown RBP23.92■■□□□ 1.42
KDM5C-201ENST00000349663 TTLL12Q14166 644 aaPredicted RBP23.92■■□□□ 1.42
KDM5C-201ENST00000349663 OGFOD1Q8N543 542 aa23.92■■□□□ 1.42
KDM5C-201ENST00000349663 ZNF296Q8WUU4 475 aaPredicted RBP23.92■■□□□ 1.42
KDM5C-201ENST00000349663 CDC5LQ99459 802 aaKnown RBP23.92■■□□□ 1.42
KDM5C-201ENST00000349663 IFT57Q9NWB7 429 aa23.92■■□□□ 1.42
KDM5C-201ENST00000349663 WTIPA6NIX2 430 aaPredicted RBP23.91■■□□□ 1.42
KDM5C-201ENST00000349663 TM4SF4P48230 202 aa23.91■■□□□ 1.42
KDM5C-201ENST00000349663 GNAI1P63096 354 aa23.91■■□□□ 1.42
KDM5C-201ENST00000349663 CALD1Q05682 793 aaKnown RBP23.9■■□□□ 1.42
KDM5C-201ENST00000349663 DACT2Q5SW24 774 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms