RNA–Protein interactions for RNA: ENST00000345392.2

VHL-202, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best) BASIC

Gene VHL, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-202ENST00000345392 NYAP1Q6ZVC0 841 aa20.89■□□□□ 0.93
VHL-202ENST00000345392 MRFAP1L1Q96HT8 127 aa20.89■□□□□ 0.93
VHL-202ENST00000345392 ORAI2Q96SN7 254 aa20.89■□□□□ 0.93
VHL-202ENST00000345392 MED23Q9ULK4 1368 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 CHD2O14647 1828 aaKnown RBP20.88■□□□□ 0.93
VHL-202ENST00000345392 PIP4K2AP48426 406 aaPredicted RBP20.88■□□□□ 0.93
VHL-202ENST00000345392 GABPB1Q06547 395 aaPredicted RBP20.88■□□□□ 0.93
VHL-202ENST00000345392 ELF2Q15723 593 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 SARM1Q6SZW1 724 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 KSR2Q6VAB6 950 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 CFAP45Q9UL16 551 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 STRCQ7RTU9 1775 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 GIGYF1O75420 1035 aaPredicted RBP20.88■□□□□ 0.93
VHL-202ENST00000345392 ALDH1L1O75891 902 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 SLC39A6Q13433 755 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 CCDC129Q6ZRS4 1044 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 NEK1Q96PY6 1258 aa20.88■□□□□ 0.93
VHL-202ENST00000345392 CCZ1BP86790 482 aa20.87■□□□□ 0.93
VHL-202ENST00000345392 CCZ1P86791 482 aaPredicted RBP20.87■□□□□ 0.93
VHL-202ENST00000345392 STX1AQ16623 288 aa20.87■□□□□ 0.93
VHL-202ENST00000345392 PLEKHO1Q53GL0 409 aaPredicted RBP20.87■□□□□ 0.93
VHL-202ENST00000345392 SYTL4Q96C24 671 aaPredicted RBP20.87■□□□□ 0.93
VHL-202ENST00000345392 CAVIN2O95810 425 aa20.87■□□□□ 0.93
VHL-202ENST00000345392 FBXO38Q6PIJ6 1188 aa20.87■□□□□ 0.93
VHL-202ENST00000345392 DHX40Q8IX18 779 aaKnown RBP20.87■□□□□ 0.93
VHL-202ENST00000345392 ZNF397Q8NF99 534 aaPredicted RBP20.87■□□□□ 0.93
VHL-202ENST00000345392 HMG20BQ9P0W2 317 aa20.87■□□□□ 0.93
VHL-202ENST00000345392 COL15A1P39059 1388 aa20.87■□□□□ 0.93
VHL-202ENST00000345392 NFAT5O94916 1531 aa20.87■□□□□ 0.93
VHL-202ENST00000345392 GRM8O00222 908 aa20.86■□□□□ 0.93
VHL-202ENST00000345392 ADD1P35611 737 aaKnown RBP20.86■□□□□ 0.93
VHL-202ENST00000345392 SCRN1Q12765 414 aa20.86■□□□□ 0.93
VHL-202ENST00000345392 AXIN2Q9Y2T1 843 aa20.86■□□□□ 0.93
VHL-202ENST00000345392 MYL6BP14649 208 aa20.86■□□□□ 0.93
VHL-202ENST00000345392 KRT222Q8N1A0 295 aa20.86■□□□□ 0.93
VHL-202ENST00000345392 SEC62Q99442 399 aaKnown RBP20.86■□□□□ 0.93
VHL-202ENST00000345392 MED1Q15648 1581 aaPredicted RBP20.86■□□□□ 0.93
VHL-202ENST00000345392 KDM3BQ7LBC6 1761 aa20.85■□□□□ 0.93
VHL-202ENST00000345392 TSGA10IPQ3SY00 556 aa20.85■□□□□ 0.93
VHL-202ENST00000345392 ZSCAN16Q9H4T2 348 aaPredicted RBP20.85■□□□□ 0.93
VHL-202ENST00000345392 ZNF335Q9H4Z2 1342 aaPredicted RBP20.85■□□□□ 0.93
VHL-202ENST00000345392 NEMFO60524 1076 aa20.85■□□□□ 0.93
VHL-202ENST00000345392 FGD1P98174 961 aa20.85■□□□□ 0.93
VHL-202ENST00000345392 SNW1Q13573 536 aaKnown RBP20.85■□□□□ 0.93
VHL-202ENST00000345392 TERF2Q15554 542 aa20.85■□□□□ 0.93
VHL-202ENST00000345392 CCAR2Q8N163 923 aaKnown RBP20.85■□□□□ 0.93
VHL-202ENST00000345392 ST7Q9NRC1 585 aa20.85■□□□□ 0.93
VHL-202ENST00000345392 GCP02774 474 aa20.84■□□□□ 0.93
VHL-202ENST00000345392 AOPEPQ8N6M6 819 aa20.84■□□□□ 0.93
VHL-202ENST00000345392 ANKRD24Q8TF21 1146 aa20.84■□□□□ 0.93
VHL-202ENST00000345392 USP28Q96RU2 1077 aa20.84■□□□□ 0.93
VHL-202ENST00000345392 PROSER2Q86WR7 435 aaPredicted RBP20.83■□□□□ 0.93
VHL-202ENST00000345392 CYP21A2P08686 494 aa20.83■□□□□ 0.92
VHL-202ENST00000345392 GUCY1B3Q02153 619 aa20.83■□□□□ 0.92
VHL-202ENST00000345392 KINO60870 393 aaKnown RBP20.82■□□□□ 0.92
VHL-202ENST00000345392 USPL1Q5W0Q7 1092 aa20.82■□□□□ 0.92
VHL-202ENST00000345392 CCDC73Q6ZRK6 1079 aa20.82■□□□□ 0.92
VHL-202ENST00000345392 CHMP4AQ9BY43 222 aa20.82■□□□□ 0.92
VHL-202ENST00000345392 KRT32Q14532 448 aa20.82■□□□□ 0.92
VHL-202ENST00000345392 ERO1AQ96HE7 468 aa20.82■□□□□ 0.92
VHL-202ENST00000345392 RCOR1Q9UKL0 485 aa20.82■□□□□ 0.92
VHL-202ENST00000345392 ERBB3P21860 1342 aa20.82■□□□□ 0.92
VHL-202ENST00000345392 CTAGE5O15320 804 aa20.81■□□□□ 0.92
VHL-202ENST00000345392 CCT2P78371 535 aaKnown RBP20.81■□□□□ 0.92
VHL-202ENST00000345392 LINS1Q8NG48 757 aa20.81■□□□□ 0.92
VHL-202ENST00000345392 CCDC9Q9Y3X0 531 aaKnown RBP20.81■□□□□ 0.92
VHL-202ENST00000345392 ME1P48163 572 aa20.81■□□□□ 0.92
VHL-202ENST00000345392 HDAC5Q9UQL6 1122 aa20.81■□□□□ 0.92
VHL-202ENST00000345392 SLU7O95391 586 aaKnown RBP20.81■□□□□ 0.92
VHL-202ENST00000345392 FSIP1Q8NA03 581 aa20.81■□□□□ 0.92
VHL-202ENST00000345392 DNAJC2Q99543 621 aaKnown RBP20.81■□□□□ 0.92
VHL-202ENST00000345392 ANO10Q9NW15 660 aa20.81■□□□□ 0.92
VHL-202ENST00000345392 NAP1L2Q9ULW6 460 aaPredicted RBP20.81■□□□□ 0.92
VHL-202ENST00000345392 IGKV5-2P06315 115 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 EPHA10Q5JZY3 1008 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 NBPF11Q86T75 865 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 KCNH5Q8NCM2 988 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 ZBTB22O15209 634 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 CTDNEP1O95476 244 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 ZC3H6P61129 1189 aaKnown RBP20.8■□□□□ 0.92
VHL-202ENST00000345392 APOBRQ0VD83 1088 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 LRRN4CLQ8ND94 238 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 NSUN7Q8NE18 718 aaKnown RBP20.8■□□□□ 0.92
VHL-202ENST00000345392 ENGASEQ8NFI3 743 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 ZNF446Q9NWS9 450 aa20.8■□□□□ 0.92
VHL-202ENST00000345392 JCADQ9P266 1359 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 STOX1Q6ZVD7 989 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 RIC3Q7Z5B4 369 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 SMARCC2Q8TAQ2 1214 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 NCOA5Q9HCD5 579 aaKnown RBP20.79■□□□□ 0.92
VHL-202ENST00000345392 PTPDC1A2A3K4 754 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 ERICH4A6NGS2 130 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 ERCC6LQ2NKX8 1250 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 SLFNL1Q499Z3 407 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 ARHGEF25Q86VW2 580 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 CEP57L1Q8IYX8 460 aa20.79■□□□□ 0.92
VHL-202ENST00000345392 DBNLQ9UJU6 430 aaKnown RBP20.79■□□□□ 0.92
VHL-202ENST00000345392 FAM160A1Q05DH4 1040 aa20.78■□□□□ 0.92
VHL-202ENST00000345392 PDIA6Q15084 440 aa20.78■□□□□ 0.92
VHL-202ENST00000345392 AMOTQ4VCS5 1084 aa20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms