RNA–Protein interactions for RNA: ENST00000345356.10

COL12A1-202, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL12A1, Length 5,886 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-202ENST00000345356 ATP2B2Q01814 1243 aa13.76□□□□□ -0.21
COL12A1-202ENST00000345356 CCDC85AQ96PX6 553 aaPredicted RBP13.76□□□□□ -0.21
COL12A1-202ENST00000345356 RRP15Q9Y3B9 282 aaKnown RBP13.76□□□□□ -0.21
COL12A1-202ENST00000345356 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 TXNDC2Q86VQ3 553 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 ALG1Q9BT22 464 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 EMILIN1Q9Y6C2 1016 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 RALGAPBQ86X10 1494 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 TROQ12816 1431 aaPredicted RBP13.75□□□□□ -0.21
COL12A1-202ENST00000345356 A0A1B0GVL5 298 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 GOLGA6BA6NDN3 693 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 SMIM23A6NLE4 172 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 NLRP5P59047 1200 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 CNGA4Q8IV77 575 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 LMNTD2Q8IXW0 634 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 STAMBPO95630 424 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 LIG3P49916 1009 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 CCDC122Q5T0U0 273 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 DAAM2Q86T65 1068 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 CCDC42Q96M95 316 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 TTC14Q96N46 770 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 HECW1Q76N89 1606 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 ABCC5O15440 1437 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 ANKRD36BQ8N2N9 1353 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 MINDY4BA8MYZ0 360 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 CPA1P15085 419 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 UBA5Q9GZZ9 404 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 LRP2BPQ9P2M1 347 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 TLDC2A0PJX2 215 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 ARID4AP29374 1257 aaPredicted RBP13.75□□□□□ -0.21
COL12A1-202ENST00000345356 FANCCQ00597 558 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 FAM173BQ6P4H8 233 aa13.75□□□□□ -0.21
COL12A1-202ENST00000345356 RUFY3Q7L099 469 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 CCDC194A0A1B0GVG4 234 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 BRD1O95696 1058 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 IDEP14735 1019 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 ATP11AP98196 1134 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 TMEM67Q5HYA8 995 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 CEP85Q6P2H3 762 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 NCOA7Q8NI08 942 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 EFCC1Q9HA90 598 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 ERBB4Q15303 1308 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 TOP2BQ02880 1626 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 CAMSAP2Q08AD1 1489 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 UBA7P41226 1012 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 MXRA7P84157 204 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 BRD3Q15059 726 aa13.74□□□□□ -0.21
COL12A1-202ENST00000345356 PNMA8AQ86V59 439 aaPredicted RBP13.74□□□□□ -0.21
COL12A1-202ENST00000345356 UBXN1Q04323 297 aa13.73□□□□□ -0.21
COL12A1-202ENST00000345356 AKAP2Q9Y2D5 859 aa13.73□□□□□ -0.21
COL12A1-202ENST00000345356 RAD50Q92878 1312 aa13.73□□□□□ -0.21
COL12A1-202ENST00000345356 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
COL12A1-202ENST00000345356 CCDC172P0C7W6 258 aa13.73□□□□□ -0.21
COL12A1-202ENST00000345356 AMPD3Q01432 767 aa13.73□□□□□ -0.21
COL12A1-202ENST00000345356 CABS1Q96KC9 395 aa13.73□□□□□ -0.21
COL12A1-202ENST00000345356 ARHGAP6O43182 974 aa13.73□□□□□ -0.21
COL12A1-202ENST00000345356 CREB3L3Q68CJ9 461 aa13.73□□□□□ -0.21
COL12A1-202ENST00000345356 TMEM132AQ24JP5 1023 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 TCERG1LQ5VWI1 586 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 NUTM2AQ8IVF1 878 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-202ENST00000345356 PPFIBP2Q8ND30 876 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 DHX58Q96C10 678 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 IFT74Q96LB3 600 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 PPP1R12CQ9BZL4 782 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 TTF2Q9UNY4 1162 aaKnown RBP13.72□□□□□ -0.21
COL12A1-202ENST00000345356 ELP1O95163 1332 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 USP5P45974 858 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 PKP1Q13835 747 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 AP1ARQ63HQ0 302 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 UBLCP1Q8WVY7 318 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-202ENST00000345356 MYD88Q99836 296 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 ANTXR1Q9H6X2 564 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 TCP11L1Q9NUJ3 509 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 FEZ2Q9UHY8 353 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-202ENST00000345356 RASAL2Q9UJF2 1139 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 SCAF11Q99590 1463 aaKnown RBP13.72□□□□□ -0.21
COL12A1-202ENST00000345356 PTPDC1A2A3K4 754 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 VIMP08670 466 aaKnown RBP13.72□□□□□ -0.21
COL12A1-202ENST00000345356 POTEJP0CG39 1038 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 ANKRD24Q8TF21 1146 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 STIM2Q9P246 746 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 ATP8B2P98198 1209 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 SETDB1Q15047 1291 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 METTL24Q5JXM2 366 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 CEP85LQ5SZL2 805 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 MICAL1Q8TDZ2 1067 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 LUC7L2Q9Y383 392 aaKnown RBP13.72□□□□□ -0.21
COL12A1-202ENST00000345356 NMIQ13287 307 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-202ENST00000345356 SPTY2D1Q68D10 685 aaPredicted RBP13.72□□□□□ -0.21
COL12A1-202ENST00000345356 IGSF22Q8N9C0 903 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 EXOC1Q9NV70 894 aa13.72□□□□□ -0.21
COL12A1-202ENST00000345356 MPHOSPH10O00566 681 aaKnown RBP13.71□□□□□ -0.21
COL12A1-202ENST00000345356 OTUD7AQ8TE49 926 aaPredicted RBP13.71□□□□□ -0.21
COL12A1-202ENST00000345356 RAB34Q9BZG1 259 aa13.71□□□□□ -0.21
COL12A1-202ENST00000345356 BAIAP2L1Q9UHR4 511 aa13.71□□□□□ -0.21
COL12A1-202ENST00000345356 MAP3K9P80192 1104 aa13.71□□□□□ -0.21
COL12A1-202ENST00000345356 ZBTB16Q05516 673 aa13.71□□□□□ -0.21
COL12A1-202ENST00000345356 PPFIA1Q13136 1202 aa13.71□□□□□ -0.21
COL12A1-202ENST00000345356 NSD2O96028 1365 aa13.71□□□□□ -0.21
COL12A1-202ENST00000345356 EFCAB8A8MWE9 144 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms