RNA–Protein interactions for RNA: ENST00000344770.6

PDZK1-201, Transcript of PDZ domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDZK1, Length 2,084 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZK1-201ENST00000344770 CGNL1Q0VF96 1302 aa11.65□□□□□ -0.54
PDZK1-201ENST00000344770 HSP90AB1P08238 724 aaKnown RBP11.65□□□□□ -0.54
PDZK1-201ENST00000344770 FBLN1P23142 703 aa11.65□□□□□ -0.54
PDZK1-201ENST00000344770 GABPB1Q06547 395 aaPredicted RBP11.65□□□□□ -0.54
PDZK1-201ENST00000344770 BIRC2Q13490 618 aa11.65□□□□□ -0.54
PDZK1-201ENST00000344770 RRS1Q15050 365 aaKnown RBP11.65□□□□□ -0.54
PDZK1-201ENST00000344770 C11orf91Q3C1V1 193 aa11.65□□□□□ -0.54
PDZK1-201ENST00000344770 MICALL1Q8N3F8 863 aa11.65□□□□□ -0.54
PDZK1-201ENST00000344770 LTV1Q96GA3 475 aaPredicted RBP11.65□□□□□ -0.54
PDZK1-201ENST00000344770 RGPD3A6NKT7 1758 aaPredicted RBP11.65□□□□□ -0.54
PDZK1-201ENST00000344770 RGPD4Q7Z3J3 1758 aa11.65□□□□□ -0.54
PDZK1-201ENST00000344770 HMMRO75330 724 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 RBM5P52756 815 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDZK1-201ENST00000344770 LRCH2Q5VUJ6 765 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 SND1Q7KZF4 910 aaKnown RBP eCLIP11.64□□□□□ -0.55
PDZK1-201ENST00000344770 TTC30AQ86WT1 665 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 ERCC4Q92889 916 aaPredicted RBP11.64□□□□□ -0.55
PDZK1-201ENST00000344770 LRRC27Q9C0I9 530 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 RETREG1Q9H6L5 497 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 MED4Q9NPJ6 270 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 PAXBP1Q9Y5B6 917 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 FLT4P35916 1363 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 KIAA2012Q0VF49 1180 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 SWT1Q5T5J6 900 aaKnown RBP11.64□□□□□ -0.55
PDZK1-201ENST00000344770 LARP1BQ659C4 914 aaKnown RBP11.64□□□□□ -0.55
PDZK1-201ENST00000344770 C16orf87Q6PH81 154 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 CCDC146Q8IYE0 955 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 KLF15Q9UIH9 416 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 SBF2Q86WG5 1849 aa11.64□□□□□ -0.55
PDZK1-201ENST00000344770 EIF5P55010 431 aaKnown RBP11.63□□□□□ -0.55
PDZK1-201ENST00000344770 E2F5Q15329 346 aa11.63□□□□□ -0.55
PDZK1-201ENST00000344770 SKAP1Q86WV1 359 aa11.63□□□□□ -0.55
PDZK1-201ENST00000344770 GAS2L3Q86XJ1 694 aa11.63□□□□□ -0.55
PDZK1-201ENST00000344770 FEZ1Q99689 392 aa11.63□□□□□ -0.55
PDZK1-201ENST00000344770 NUP188Q5SRE5 1749 aa11.63□□□□□ -0.55
PDZK1-201ENST00000344770 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
PDZK1-201ENST00000344770 PLSCR1O15162 318 aa11.63□□□□□ -0.55
PDZK1-201ENST00000344770 U2AF1L5P0DN76 240 aaPredicted RBP11.63□□□□□ -0.55
PDZK1-201ENST00000344770 IGBP1P78318 339 aa11.63□□□□□ -0.55
PDZK1-201ENST00000344770 U2AF1Q01081 240 aaKnown RBP eCLIP11.63□□□□□ -0.55
PDZK1-201ENST00000344770 CCDC70Q6NSX1 233 aa11.63□□□□□ -0.55
PDZK1-201ENST00000344770 CHCHD3Q9NX63 227 aaKnown RBP11.63□□□□□ -0.55
PDZK1-201ENST00000344770 hCG_2014768A0A024R1R8 64 aa11.62□□□□□ -0.55
PDZK1-201ENST00000344770 TIMM44O43615 452 aa11.62□□□□□ -0.55
PDZK1-201ENST00000344770 TGFB3P10600 412 aa11.62□□□□□ -0.55
PDZK1-201ENST00000344770 KCNJ4P48050 445 aa11.62□□□□□ -0.55
PDZK1-201ENST00000344770 ZNF396Q96N95 335 aaPredicted RBP11.62□□□□□ -0.55
PDZK1-201ENST00000344770 CCDC39Q9UFE4 941 aa11.62□□□□□ -0.55
PDZK1-201ENST00000344770 KNSTRNQ9Y448 316 aa11.62□□□□□ -0.55
PDZK1-201ENST00000344770 LRP5O75197 1615 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 NHSQ6T4R5 1651 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 TULP2O00295 520 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 CTR9Q6PD62 1173 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 ANKRD13BQ86YJ7 626 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 KLHL23Q8NBE8 558 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 NEUROD6Q96NK8 337 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 DIS3Q9Y2L1 958 aaKnown RBP11.61□□□□□ -0.55
PDZK1-201ENST00000344770 IVNS1ABPQ9Y6Y0 642 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 ANKRD26Q9UPS8 1709 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 ATXN8OSP0DMR3 200 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 ZNF445P59923 1031 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 R3HDM1Q15032 1099 aaKnown RBP11.61□□□□□ -0.55
PDZK1-201ENST00000344770 BRMS1Q9HCU9 246 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 IL16Q14005 1332 aa11.61□□□□□ -0.55
PDZK1-201ENST00000344770 KCNA2P16389 499 aa11.6□□□□□ -0.55
PDZK1-201ENST00000344770 DDIT3P35638 169 aa11.6□□□□□ -0.55
PDZK1-201ENST00000344770 NBPF14Q5TI25 921 aa11.6□□□□□ -0.55
PDZK1-201ENST00000344770 PTF1AQ7RTS3 328 aa11.6□□□□□ -0.55
PDZK1-201ENST00000344770 KIF3AQ9Y496 699 aa11.6□□□□□ -0.55
PDZK1-201ENST00000344770 EMILIN1Q9Y6C2 1016 aa11.6□□□□□ -0.55
PDZK1-201ENST00000344770 NSD2O96028 1365 aa11.6□□□□□ -0.55
PDZK1-201ENST00000344770 MEGF6O75095 1541 aa11.6□□□□□ -0.55
PDZK1-201ENST00000344770 PLIN1O60240 522 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 GTF2A1P52655 376 aaPredicted RBP11.59□□□□□ -0.55
PDZK1-201ENST00000344770 CLEC17AQ6ZS10 378 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 CCDC47Q96A33 483 aaKnown RBP11.59□□□□□ -0.55
PDZK1-201ENST00000344770 PANK3Q9H999 370 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.59□□□□□ -0.551e-6■■□□□ 12.3
PDZK1-201ENST00000344770 IQSEC3Q9UPP2 1182 aaPredicted RBP11.59□□□□□ -0.55
PDZK1-201ENST00000344770 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.59□□□□□ -0.55
PDZK1-201ENST00000344770 GOLGA6L22H0YM25 854 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 GIGYF1O75420 1035 aaPredicted RBP11.59□□□□□ -0.55
PDZK1-201ENST00000344770 CBX1P83916 185 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 KLHL10Q6JEL2 608 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 IQCF2Q8IXL9 164 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 VPS37AQ8NEZ2 397 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 RPS6KC1Q96S38 1066 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 CDC5LQ99459 802 aaKnown RBP11.59□□□□□ -0.55
PDZK1-201ENST00000344770 IFT122Q9HBG6 1241 aa11.59□□□□□ -0.55
PDZK1-201ENST00000344770 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.59□□□□□ -0.55
PDZK1-201ENST00000344770 DDX49Q9Y6V7 483 aaKnown RBP11.59□□□□□ -0.55
PDZK1-201ENST00000344770 TRPC1P48995 793 aa11.58□□□□□ -0.56
PDZK1-201ENST00000344770 SKIV2LQ15477 1246 aaKnown RBP11.58□□□□□ -0.56
PDZK1-201ENST00000344770 PTPROQ16827 1216 aa11.58□□□□□ -0.56
PDZK1-201ENST00000344770 AMOTQ4VCS5 1084 aa11.58□□□□□ -0.56
PDZK1-201ENST00000344770 TIGD1Q96MW7 591 aa11.58□□□□□ -0.56
PDZK1-201ENST00000344770 RMI1Q9H9A7 625 aa11.58□□□□□ -0.56
PDZK1-201ENST00000344770 ZNF232Q9UNY5 417 aa11.58□□□□□ -0.56
PDZK1-201ENST00000344770 RGPD2P0DJD1 1756 aa11.58□□□□□ -0.56
PDZK1-201ENST00000344770 KCNQ2O43526 872 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms