RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 SMARCC2Q8TAQ2 1214 aa27.28■■□□□ 1.96
NKX2-3-201ENST00000344586 USP16Q9Y5T5 823 aa27.28■■□□□ 1.96
NKX2-3-201ENST00000344586 H3BQV1 296 aa27.27■■□□□ 1.96
NKX2-3-201ENST00000344586 IFFO2Q5TF58 517 aa27.27■■□□□ 1.96
NKX2-3-201ENST00000344586 DDX46Q7L014 1031 aaKnown RBP27.27■■□□□ 1.96
NKX2-3-201ENST00000344586 CCDC186Q7Z3E2 898 aa27.27■■□□□ 1.96
NKX2-3-201ENST00000344586 ZSCAN16Q9H4T2 348 aaPredicted RBP27.27■■□□□ 1.96
NKX2-3-201ENST00000344586 KRT28Q7Z3Y7 464 aa27.26■■□□□ 1.95
NKX2-3-201ENST00000344586 DNAJC25Q9H1X3 360 aa27.26■■□□□ 1.95
NKX2-3-201ENST00000344586 MST1RQ04912 1400 aa27.26■■□□□ 1.95
NKX2-3-201ENST00000344586 SH3TC1Q8TE82 1336 aa27.26■■□□□ 1.95
NKX2-3-201ENST00000344586 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.26■■□□□ 1.95
NKX2-3-201ENST00000344586 LRRC2Q9BYS8 371 aa27.26■■□□□ 1.95
NKX2-3-201ENST00000344586 BCL2L12Q9HB09 334 aa27.26■■□□□ 1.95
NKX2-3-201ENST00000344586 MYH15Q9Y2K3 1946 aa27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 RIOK3O14730 519 aaKnown RBP27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 SNRPA1P09661 255 aaKnown RBP27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 LAMA4Q16363 1823 aa27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 PFKFB2O60825 505 aa27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 ZNF165P49910 485 aa27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 CASP7P55210 303 aa27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 ZC3H6P61129 1189 aaKnown RBP27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 CHAF1AQ13111 956 aaPredicted RBP27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 TRIM5Q9C035 493 aa27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 NRBP1Q9UHY1 535 aa27.25■■□□□ 1.95
NKX2-3-201ENST00000344586 KIF1AQ12756 1690 aa27.24■■□□□ 1.95
NKX2-3-201ENST00000344586 ALS2Q96Q42 1657 aa27.24■■□□□ 1.95
NKX2-3-201ENST00000344586 LRMPQ12912 555 aa27.24■■□□□ 1.95
NKX2-3-201ENST00000344586 LLPHQ9BRT6 129 aaKnown RBP27.24■■□□□ 1.95
NKX2-3-201ENST00000344586 CFAP45Q9UL16 551 aa27.24■■□□□ 1.95
NKX2-3-201ENST00000344586 PALLDQ8WX93 1383 aa27.24■■□□□ 1.95
NKX2-3-201ENST00000344586 GLI3P10071 1580 aa27.23■■□□□ 1.95
NKX2-3-201ENST00000344586 ADD1P35611 737 aaKnown RBP27.23■■□□□ 1.95
NKX2-3-201ENST00000344586 KBTBD3Q8NAB2 608 aa27.23■■□□□ 1.95
NKX2-3-201ENST00000344586 NLRP2Q9NX02 1062 aa27.23■■□□□ 1.95
NKX2-3-201ENST00000344586 ATP5J2-PTCD1G3V325 749 aa27.23■■□□□ 1.95
NKX2-3-201ENST00000344586 PTCD1O75127 700 aaKnown RBP27.23■■□□□ 1.95
NKX2-3-201ENST00000344586 TATP17735 454 aaPredicted RBP27.23■■□□□ 1.95
NKX2-3-201ENST00000344586 NSUN7Q8NE18 718 aaKnown RBP27.23■■□□□ 1.95
NKX2-3-201ENST00000344586 ABCC6O95255 1503 aa27.22■■□□□ 1.95
NKX2-3-201ENST00000344586 A0A087WZG4 1122 aa27.22■■□□□ 1.95
NKX2-3-201ENST00000344586 DRC7Q8IY82 874 aa27.22■■□□□ 1.95
NKX2-3-201ENST00000344586 NAA16Q6N069 864 aaPredicted RBP27.21■■□□□ 1.95
NKX2-3-201ENST00000344586 ZSCAN25Q6NSZ9 544 aa27.21■■□□□ 1.95
NKX2-3-201ENST00000344586 CTDNEP1O95476 244 aa27.21■■□□□ 1.95
NKX2-3-201ENST00000344586 HMGB1P09429 215 aaKnown RBP27.21■■□□□ 1.95
NKX2-3-201ENST00000344586 IFNL2Q8IZJ0 200 aa27.21■■□□□ 1.95
NKX2-3-201ENST00000344586 TTC5Q8N0Z6 440 aa27.21■■□□□ 1.95
NKX2-3-201ENST00000344586 DHX32Q7L7V1 743 aaKnown RBP27.2■■□□□ 1.95
NKX2-3-201ENST00000344586 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.2■■□□□ 1.95
NKX2-3-201ENST00000344586 CAVIN2O95810 425 aa27.2■■□□□ 1.94
NKX2-3-201ENST00000344586 SMAP1Q8IYB5 467 aaPredicted RBP27.2■■□□□ 1.94
NKX2-3-201ENST00000344586 PTPDC1A2A3K4 754 aa27.19■■□□□ 1.94
NKX2-3-201ENST00000344586 FGD1P98174 961 aa27.19■■□□□ 1.94
NKX2-3-201ENST00000344586 SLFNL1Q499Z3 407 aa27.19■■□□□ 1.94
NKX2-3-201ENST00000344586 FMNL2Q96PY5 1086 aa27.19■■□□□ 1.94
NKX2-3-201ENST00000344586 FTOQ9C0B1 505 aaKnown RBP eCLIP27.19■■□□□ 1.94
NKX2-3-201ENST00000344586 C1orf167Q5SNV9 1468 aa27.19■■□□□ 1.94
NKX2-3-201ENST00000344586 LAMB4A4D0S4 1761 aa27.19■■□□□ 1.94
NKX2-3-201ENST00000344586 CTIFO43310 598 aaKnown RBP27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 CDC25BP30305 580 aa27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 CEBPZQ03701 1054 aaKnown RBP27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 LMBR1LQ6UX01 489 aa27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 CCDC9Q9Y3X0 531 aaKnown RBP27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 APOBRQ0VD83 1088 aa27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 IQCB1Q15051 598 aa27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 GOLPH3LQ9H4A5 285 aa27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 HELLSQ9NRZ9 838 aa27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 CLIP2Q9UDT6 1046 aa27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 RCOR1Q9UKL0 485 aa27.18■■□□□ 1.94
NKX2-3-201ENST00000344586 FOSBP53539 338 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 FOXO4P98177 505 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 EXOSC10Q01780 885 aaKnown RBP27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 C11orf57Q6ZUT1 292 aaPredicted RBP27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 PLBD2Q8NHP8 589 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 DSCC1Q9BVC3 393 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 AGXT2Q9BYV1 514 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 GOLIM4O00461 696 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 CCDC144BQ3MJ40 725 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 CCDC144CPQ8IYA2 1237 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 DCAF5Q96JK2 942 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 PAG1Q9NWQ8 432 aa27.17■■□□□ 1.94
NKX2-3-201ENST00000344586 SALL1Q9NSC2 1324 aa27.16■■□□□ 1.94
NKX2-3-201ENST00000344586 COL18A1P39060 1754 aa27.16■■□□□ 1.94
NKX2-3-201ENST00000344586 SARM1Q6SZW1 724 aa27.16■■□□□ 1.94
NKX2-3-201ENST00000344586 ATG9AQ7Z3C6 839 aa27.16■■□□□ 1.94
NKX2-3-201ENST00000344586 CCAR1Q8IX12 1150 aaKnown RBP27.16■■□□□ 1.94
NKX2-3-201ENST00000344586 ANKRD7Q92527 254 aa27.16■■□□□ 1.94
NKX2-3-201ENST00000344586 PKD1L3Q7Z443 1732 aa27.15■■□□□ 1.94
NKX2-3-201ENST00000344586 CYP27B1O15528 508 aa27.15■■□□□ 1.94
NKX2-3-201ENST00000344586 A0A0G2JLW4 131 aa27.15■■□□□ 1.94
NKX2-3-201ENST00000344586 ZMYM1Q5SVZ6 1142 aa27.15■■□□□ 1.94
NKX2-3-201ENST00000344586 CACTINQ8WUQ7 758 aaKnown RBP27.15■■□□□ 1.94
NKX2-3-201ENST00000344586 CTAGE5O15320 804 aa27.14■■□□□ 1.94
NKX2-3-201ENST00000344586 SNW1Q13573 536 aaKnown RBP27.14■■□□□ 1.94
NKX2-3-201ENST00000344586 STX1AQ16623 288 aa27.14■■□□□ 1.94
NKX2-3-201ENST00000344586 USP28Q96RU2 1077 aa27.14■■□□□ 1.94
NKX2-3-201ENST00000344586 TJP1Q07157 1748 aa27.14■■□□□ 1.93
NKX2-3-201ENST00000344586 C16orf45Q96MC5 204 aaPredicted RBP27.13■■□□□ 1.93
NKX2-3-201ENST00000344586 H7C1W4 665 aa27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms