RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 POU5F1Q01860 360 aaKnown RBP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC113Q9H0I3 377 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 ETAA1Q9NY74 926 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 PPP6R1Q9UPN7 881 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 SLU7O95391 586 aaKnown RBP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 NOP2P46087 812 aaKnown RBP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 TSC22D1Q15714 1073 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 HDXQ7Z353 690 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 TDRD7Q8NHU6 1098 aaKnown RBP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 WDR37Q9Y2I8 494 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 OGFOD1Q8N543 542 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 IQCA1LA6NCM1 817 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 MAN1A2O60476 641 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 MPP4Q96JB8 637 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 DRC3Q9H069 523 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 DDX25Q9UHL0 483 aaKnown RBP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 GMEB1Q9Y692 573 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 PPFIA1Q13136 1202 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 ATL3Q6DD88 541 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 CCDC26Q8TAB7 109 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 IFT81Q8WYA0 676 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 IQANK1A0A1B0GTG1 560 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 CEBPZQ03701 1054 aaKnown RBP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 SCAF8Q9UPN6 1271 aaKnown RBP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 RNF187Q5TA31 235 aaPredicted RBP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 METTL14Q9HCE5 456 aaKnown RBP4.28□□□□□ -1.72
SYNE2-202ENST00000344113 SUFUQ9UMX1 484 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 QPCTLQ9NXS2 382 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 COMMD10Q9Y6G5 202 aa4.28□□□□□ -1.72
SYNE2-202ENST00000344113 FERP16591 822 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 ACADVLP49748 655 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 PDIA5Q14554 519 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 GIMAP4Q9NUV9 329 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 TSG101Q99816 390 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 SCAF11Q99590 1463 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 RRP36Q96EU6 259 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 CTAGE1Q96RT6 745 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 MPHOSPH8Q99549 860 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 FNBP4Q8N3X1 1017 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 USP33Q8TEY7 942 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 GOLGA1Q92805 767 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 HSF2BPO75031 334 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 HIP1RO75146 1068 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 MAP3K21Q5TCX8 1036 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 NEK1Q96PY6 1258 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 ATP5DP30049 168 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 RAD51AP2Q09MP3 1159 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 PNISRQ8TF01 805 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 MYBBP1AQ9BQG0 1328 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 LRRD1A4D1F6 860 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 IPO5O00410 1097 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 SLFN14P0C7P3 912 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 APBB1IPQ7Z5R6 666 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 MFN1Q8IWA4 741 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 PPFIA4O75335 1185 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 CLUL1Q15846 466 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 INPP5BP32019 993 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 CNGA3Q16281 694 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 GPR161Q8N6U8 529 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 ZC3H15Q8WU90 426 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 LRRFIP2Q9Y608 721 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 EVI5O60447 810 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 PRR29P0C7W0 189 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 UBE4AQ14139 1066 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 IFI16Q16666 785 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 IQCDQ96DY2 449 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 PRPF4BQ13523 1007 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 SNW1Q13573 536 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 ZEB2O60315 1214 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 FOSL1P15407 271 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 BBOF1Q8ND07 529 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 WDR33Q9C0J8 1336 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 RPL17P18621 184 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 EIF2B5Q13144 721 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 RASEFQ8IZ41 740 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 CTNNAL1Q9UBT7 734 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 SRGAP3O43295 1099 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 CCDC63Q8NA47 563 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 PPP2R3CQ969Q6 453 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 PARVBQ9HBI1 364 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 CLTAP09496 248 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 BASP1P80723 227 aaKnown RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 VPS37CA5D8V6 355 aaPredicted RBP4.27□□□□□ -1.73
SYNE2-202ENST00000344113 CCDC122Q5T0U0 273 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 GAS2L3Q86XJ1 694 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 C22orf23Q9BZE7 217 aa4.27□□□□□ -1.73
SYNE2-202ENST00000344113 FRMD3A2A2Y4 597 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 KIF4AO95239 1232 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 DZIP3Q86Y13 1208 aaKnown RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 PALM2Q8IXS6 379 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 ZBTB10Q96DT7 871 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 GOLGA8AA7E2F4 631 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 GIGYF1O75420 1035 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 DRAXINQ8NBI3 349 aaPredicted RBP4.26□□□□□ -1.73
SYNE2-202ENST00000344113 AMOTL2Q9Y2J4 779 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 ZWINTO95229 277 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 ANGPT1Q15389 498 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 TADA2BQ86TJ2 420 aa4.26□□□□□ -1.73
SYNE2-202ENST00000344113 UNC45AQ9H3U1 944 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms