RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 PLA2G12BQ9BX93 195 aa23.5■■□□□ 1.35
CDHR4-201ENST00000343366 MYH3P11055 1940 aa23.5■■□□□ 1.35
CDHR4-201ENST00000343366 RGS19P49795 217 aa23.49■■□□□ 1.35
CDHR4-201ENST00000343366 FAM161AQ3B820 660 aa23.49■■□□□ 1.35
CDHR4-201ENST00000343366 TMEM57Q8N5G2 664 aa23.49■■□□□ 1.35
CDHR4-201ENST00000343366 CLEC11AQ9Y240 323 aa23.49■■□□□ 1.35
CDHR4-201ENST00000343366 DDX60Q8IY21 1712 aaKnown RBP23.49■■□□□ 1.35
CDHR4-201ENST00000343366 ITPRIPQ8IWB1 547 aa23.48■■□□□ 1.35
CDHR4-201ENST00000343366 USP44Q9H0E7 712 aa23.48■■□□□ 1.35
CDHR4-201ENST00000343366 DDX19BQ9UMR2 479 aa23.48■■□□□ 1.35
CDHR4-201ENST00000343366 ABCC12Q96J65 1359 aa23.48■■□□□ 1.35
CDHR4-201ENST00000343366 PLIN1O60240 522 aa23.47■■□□□ 1.35
CDHR4-201ENST00000343366 UBTFL1P0CB47 393 aaPredicted RBP23.47■■□□□ 1.35
CDHR4-201ENST00000343366 CASP7P55210 303 aa23.47■■□□□ 1.35
CDHR4-201ENST00000343366 ALDH1B1P30837 517 aa23.46■■□□□ 1.35
CDHR4-201ENST00000343366 SCNN1DP51172 638 aa23.46■■□□□ 1.35
CDHR4-201ENST00000343366 FMR1Q06787 632 aaKnown RBP eCLIP23.46■■□□□ 1.35
CDHR4-201ENST00000343366 MVPQ14764 893 aaKnown RBP23.46■■□□□ 1.35
CDHR4-201ENST00000343366 SF3B3Q15393 1217 aaKnown RBP23.46■■□□□ 1.35
CDHR4-201ENST00000343366 HCLS1P14317 486 aaPredicted RBP23.45■■□□□ 1.34
CDHR4-201ENST00000343366 CCDC152Q4G0S7 254 aa23.45■■□□□ 1.34
CDHR4-201ENST00000343366 RLBP1P12271 317 aa23.44■■□□□ 1.34
CDHR4-201ENST00000343366 RTL5Q5HYW3 569 aaPredicted RBP23.44■■□□□ 1.34
CDHR4-201ENST00000343366 CST9Q5W186 159 aa23.44■■□□□ 1.34
CDHR4-201ENST00000343366 PANK1Q8TE04 598 aa23.44■■□□□ 1.34
CDHR4-201ENST00000343366 RPGRQ92834 1020 aaKnown RBP23.44■■□□□ 1.34
CDHR4-201ENST00000343366 RBM17Q96I25 401 aaKnown RBP23.44■■□□□ 1.34
CDHR4-201ENST00000343366 NBPF7P0C2Y1 421 aaPredicted RBP23.43■■□□□ 1.34
CDHR4-201ENST00000343366 CTSWP56202 376 aa23.43■■□□□ 1.34
CDHR4-201ENST00000343366 CAPNS2Q96L46 248 aa23.43■■□□□ 1.34
CDHR4-201ENST00000343366 ABT1Q9ULW3 272 aaKnown RBP23.43■■□□□ 1.34
CDHR4-201ENST00000343366 TNNQ9UQP3 1299 aa23.43■■□□□ 1.34
CDHR4-201ENST00000343366 SUPT16HQ9Y5B9 1047 aaKnown RBP23.43■■□□□ 1.34
CDHR4-201ENST00000343366 HOXA10P31260 410 aaPredicted RBP23.42■■□□□ 1.34
CDHR4-201ENST00000343366 RTL9Q8NET4 1388 aa23.41■■□□□ 1.34
CDHR4-201ENST00000343366 ZBTB7BO15156 539 aaPredicted RBP23.41■■□□□ 1.34
CDHR4-201ENST00000343366 EPS15P42566 896 aa23.41■■□□□ 1.34
CDHR4-201ENST00000343366 AAMPQ13685 434 aa23.41■■□□□ 1.34
CDHR4-201ENST00000343366 CC2D2BQ6DHV5 1058 aa23.41■■□□□ 1.34
CDHR4-201ENST00000343366 DDX46Q7L014 1031 aaKnown RBP23.41■■□□□ 1.34
CDHR4-201ENST00000343366 SLC51AQ86UW1 340 aa23.41■■□□□ 1.34
CDHR4-201ENST00000343366 CRAMP1Q96RY5 1269 aa23.41■■□□□ 1.34
CDHR4-201ENST00000343366 GNAI2P04899 355 aa23.4■■□□□ 1.34
CDHR4-201ENST00000343366 CSF1RP07333 972 aa23.4■■□□□ 1.34
CDHR4-201ENST00000343366 JDP2Q8WYK2 163 aa23.4■■□□□ 1.34
CDHR4-201ENST00000343366 MEIS3Q99687 375 aa23.4■■□□□ 1.34
CDHR4-201ENST00000343366 COG6Q9Y2V7 657 aa23.4■■□□□ 1.34
CDHR4-201ENST00000343366 TLL2Q9Y6L7 1015 aa23.4■■□□□ 1.34
CDHR4-201ENST00000343366 CYP4F22Q6NT55 531 aa23.39■■□□□ 1.33
CDHR4-201ENST00000343366 TMC4Q7Z404 712 aa23.39■■□□□ 1.33
CDHR4-201ENST00000343366 TTLL11Q8NHH1 800 aa23.39■■□□□ 1.33
CDHR4-201ENST00000343366 JARID2Q92833 1246 aaPredicted RBP23.39■■□□□ 1.33
CDHR4-201ENST00000343366 USP50Q70EL3 339 aaPredicted RBP23.38■■□□□ 1.33
CDHR4-201ENST00000343366 SUCLG2Q96I99 432 aa23.38■■□□□ 1.33
CDHR4-201ENST00000343366 GPR101Q96P66 508 aaPredicted RBP23.38■■□□□ 1.33
CDHR4-201ENST00000343366 CDC5LQ99459 802 aaKnown RBP23.38■■□□□ 1.33
CDHR4-201ENST00000343366 CASP8AP2Q9UKL3 1982 aa23.38■■□□□ 1.33
CDHR4-201ENST00000343366 TRAF5O00463 557 aa23.37■■□□□ 1.33
CDHR4-201ENST00000343366 ECE1P42892 770 aa23.37■■□□□ 1.33
CDHR4-201ENST00000343366 EIF6P56537 245 aaKnown RBP23.37■■□□□ 1.33
CDHR4-201ENST00000343366 FOXO4P98177 505 aa23.37■■□□□ 1.33
CDHR4-201ENST00000343366 RABL6Q3YEC7 729 aaPredicted RBP23.37■■□□□ 1.33
CDHR4-201ENST00000343366 GJA3Q9Y6H8 435 aa23.37■■□□□ 1.33
CDHR4-201ENST00000343366 BBOX1O75936 387 aa23.36■■□□□ 1.33
CDHR4-201ENST00000343366 MLLT1Q03111 559 aaPredicted RBP23.36■■□□□ 1.33
CDHR4-201ENST00000343366 GRIPAP1Q4V328 841 aa23.36■■□□□ 1.33
CDHR4-201ENST00000343366 C20orf194Q5TEA3 1177 aa23.36■■□□□ 1.33
CDHR4-201ENST00000343366 LMOD1P29536 600 aaPredicted RBP23.35■■□□□ 1.33
CDHR4-201ENST00000343366 MAP2K2P36507 400 aa23.35■■□□□ 1.33
CDHR4-201ENST00000343366 IFIT5Q13325 482 aaKnown RBP23.35■■□□□ 1.33
CDHR4-201ENST00000343366 GRAPQ13588 217 aa23.35■■□□□ 1.33
CDHR4-201ENST00000343366 CCDC57Q2TAC2 916 aa23.35■■□□□ 1.33
CDHR4-201ENST00000343366 LMBR1LQ6UX01 489 aa23.35■■□□□ 1.33
CDHR4-201ENST00000343366 GRAPLQ8TC17 118 aaPredicted RBP23.35■■□□□ 1.33
CDHR4-201ENST00000343366 TMX4Q9H1E5 349 aaPredicted RBP23.35■■□□□ 1.33
CDHR4-201ENST00000343366 BICC1Q9H694 974 aaKnown RBP23.35■■□□□ 1.33
CDHR4-201ENST00000343366 ANKRD18BA2A2Z9 1011 aa23.34■■□□□ 1.33
CDHR4-201ENST00000343366 LRRFIP2Q9Y608 721 aaKnown RBP23.34■■□□□ 1.33
CDHR4-201ENST00000343366 MTX1Q13505 466 aa23.33■■□□□ 1.33
CDHR4-201ENST00000343366 C3orf67Q6ZVT6 689 aa23.33■■□□□ 1.33
CDHR4-201ENST00000343366 SAPCD2Q86UD0 394 aa23.33■■□□□ 1.33
CDHR4-201ENST00000343366 LARGE2Q8N3Y3 721 aa23.33■■□□□ 1.33
CDHR4-201ENST00000343366 KAZALD1Q96I82 304 aa23.33■■□□□ 1.33
CDHR4-201ENST00000343366 HHIPL1Q96JK4 782 aa23.33■■□□□ 1.33
CDHR4-201ENST00000343366 ZBTB40Q9NUA8 1239 aa23.33■■□□□ 1.33
CDHR4-201ENST00000343366 PGAP2Q9UHJ9 254 aa23.33■■□□□ 1.33
CDHR4-201ENST00000343366 AOC2O75106 756 aa23.32■■□□□ 1.32
CDHR4-201ENST00000343366 ITGA6P23229 1130 aa23.32■■□□□ 1.32
CDHR4-201ENST00000343366 ANKRD18AQ8IVF6 992 aa23.32■■□□□ 1.32
CDHR4-201ENST00000343366 GPRC5DQ9NZD1 345 aa23.32■■□□□ 1.32
CDHR4-201ENST00000343366 CHMP3Q9Y3E7 222 aa23.32■■□□□ 1.32
CDHR4-201ENST00000343366 PDE4DIPQ5VU43 2346 aa23.31■■□□□ 1.32
CDHR4-201ENST00000343366 CCDC85CA6NKD9 419 aa23.31■■□□□ 1.32
CDHR4-201ENST00000343366 IGHMBP2P38935 993 aaKnown RBP23.31■■□□□ 1.32
CDHR4-201ENST00000343366 RPS8P62241 208 aaKnown RBP23.31■■□□□ 1.32
CDHR4-201ENST00000343366 EPHA10Q5JZY3 1008 aa23.31■■□□□ 1.32
CDHR4-201ENST00000343366 GREM2Q9H772 168 aa23.31■■□□□ 1.32
CDHR4-201ENST00000343366 TSKSQ9UJT2 592 aa23.31■■□□□ 1.32
CDHR4-201ENST00000343366 RPAP2Q8IXW5 612 aaPredicted RBP23.3■■□□□ 1.32
CDHR4-201ENST00000343366 ANKRD44Q8N8A2 993 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms