RNA–Protein interactions for RNA: ENST00000342631.7

SNED1-202, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 1 (best) BASIC

Gene SNED1, Length 1,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-202ENST00000342631 C2CD5Q86YS7 1000 aa20.13■□□□□ 0.81
SNED1-202ENST00000342631 TAF1P21675 1872 aa20.13■□□□□ 0.81
SNED1-202ENST00000342631 COL11A2P13942 1736 aaPredicted RBP20.13■□□□□ 0.81
SNED1-202ENST00000342631 SOCS7O14512 581 aa20.12■□□□□ 0.81
SNED1-202ENST00000342631 SMARCA5O60264 1052 aaPredicted RBP20.12■□□□□ 0.81
SNED1-202ENST00000342631 PTGER2P43116 358 aa20.12■□□□□ 0.81
SNED1-202ENST00000342631 METTL24Q5JXM2 366 aa20.12■□□□□ 0.81
SNED1-202ENST00000342631 TGFB2P61812 414 aa20.12■□□□□ 0.81
SNED1-202ENST00000342631 IL1RAPL2Q9NP60 686 aa20.12■□□□□ 0.81
SNED1-202ENST00000342631 PDE8BO95263 885 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 VGLL2Q8N8G2 317 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 CNKSR1Q969H4 720 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 ANKRD2Q9GZV1 360 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 CD2APQ9Y5K6 639 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 DLEC1Q9Y238 1755 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 COL4A1P02462 1669 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 PDE4AP27815 886 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 TNNI3KQ59H18 835 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 MINPP1Q9UNW1 487 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 FPGT-TNNI3KV9GXZ4 949 aa20.1■□□□□ 0.81
SNED1-202ENST00000342631 IFIT2P09913 472 aaKnown RBP20.09■□□□□ 0.81
SNED1-202ENST00000342631 CHRNDQ07001 517 aa20.09■□□□□ 0.81
SNED1-202ENST00000342631 AACSQ86V21 672 aa20.08■□□□□ 0.81
SNED1-202ENST00000342631 EAF2Q96CJ1 260 aaPredicted RBP20.08■□□□□ 0.81
SNED1-202ENST00000342631 PUM3Q15397 648 aaKnown RBP20.08■□□□□ 0.8
SNED1-202ENST00000342631 ZNF622Q969S3 477 aaKnown RBP eCLIP20.08■□□□□ 0.8
SNED1-202ENST00000342631 GPATCH3Q96I76 525 aa20.08■□□□□ 0.8
SNED1-202ENST00000342631 ZNF609O15014 1411 aa20.07■□□□□ 0.8
SNED1-202ENST00000342631 SALL3Q9BXA9 1300 aa20.07■□□□□ 0.8
SNED1-202ENST00000342631 PLEKHM2Q8IWE5 1019 aa20.07■□□□□ 0.8
SNED1-202ENST00000342631 SP8Q8IXZ3 490 aa20.07■□□□□ 0.8
SNED1-202ENST00000342631 OSBPL3Q9H4L5 887 aa20.07■□□□□ 0.8
SNED1-202ENST00000342631 STAP2Q9UGK3 403 aa20.07■□□□□ 0.8
SNED1-202ENST00000342631 A0A1B0GUL6 1792 aa20.07■□□□□ 0.8
SNED1-202ENST00000342631 AOX1Q06278 1338 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 PPEF1O14829 653 aaPredicted RBP20.06■□□□□ 0.8
SNED1-202ENST00000342631 MX1P20591 662 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 RGS3P49796 1198 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 C16orf71Q8IYS4 520 aaPredicted RBP20.06■□□□□ 0.8
SNED1-202ENST00000342631 LPIN2Q92539 896 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 TMX4Q9H1E5 349 aaPredicted RBP20.06■□□□□ 0.8
SNED1-202ENST00000342631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.06■□□□□ 0.8
SNED1-202ENST00000342631 LRRC37AA6NMS7 1700 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 TTC41PQ6P2S7 1318 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 CHRNA5P30532 468 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 UBE4AQ14139 1066 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 ATP2B3Q16720 1220 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 ATP6V0A2Q9Y487 856 aa20.06■□□□□ 0.8
SNED1-202ENST00000342631 A0A1B0GUL7 405 aa20.05■□□□□ 0.8
SNED1-202ENST00000342631 FGFR2P21802 821 aa20.04■□□□□ 0.8
SNED1-202ENST00000342631 PDE1AP54750 535 aa20.04■□□□□ 0.8
SNED1-202ENST00000342631 XDHP47989 1333 aa20.04■□□□□ 0.8
SNED1-202ENST00000342631 KIAA1551Q9HCM1 1747 aa20.04■□□□□ 0.8
SNED1-202ENST00000342631 SLC5A1P13866 664 aa20.04■□□□□ 0.8
SNED1-202ENST00000342631 NEUROD6Q96NK8 337 aa20.04■□□□□ 0.8
SNED1-202ENST00000342631 PODXL2Q9NZ53 605 aa20.04■□□□□ 0.8
SNED1-202ENST00000342631 LEMD3Q9Y2U8 911 aa20.04■□□□□ 0.8
SNED1-202ENST00000342631 ARAP2Q8WZ64 1704 aa20.03■□□□□ 0.8
SNED1-202ENST00000342631 IFIT1P09914 478 aaKnown RBP20.03■□□□□ 0.8
SNED1-202ENST00000342631 DPEP1P16444 411 aa20.03■□□□□ 0.8
SNED1-202ENST00000342631 TIMM10P62072 90 aa20.03■□□□□ 0.8
SNED1-202ENST00000342631 GRIPAP1Q4V328 841 aa20.03■□□□□ 0.8
SNED1-202ENST00000342631 CC2D2BQ6DHV5 1058 aa20.03■□□□□ 0.8
SNED1-202ENST00000342631 PRPF40BQ6NWY9 871 aaKnown RBP20.03■□□□□ 0.8
SNED1-202ENST00000342631 TTLL6Q8N841 843 aa20.03■□□□□ 0.8
SNED1-202ENST00000342631 HELBQ8NG08 1087 aaPredicted RBP20.03■□□□□ 0.8
SNED1-202ENST00000342631 OTUD7AQ8TE49 926 aaPredicted RBP20.03■□□□□ 0.8
SNED1-202ENST00000342631 CCDC8Q9H0W5 538 aaPredicted RBP20.03■□□□□ 0.8
SNED1-202ENST00000342631 BCL11AQ9H165 835 aa20.03■□□□□ 0.8
SNED1-202ENST00000342631 ECHDC1Q9NTX5 307 aa20.03■□□□□ 0.8
SNED1-202ENST00000342631 ERC2O15083 957 aa20.02■□□□□ 0.8
SNED1-202ENST00000342631 TAF5LO75529 589 aa20.02■□□□□ 0.8
SNED1-202ENST00000342631 ANKIB1Q9P2G1 1089 aa20.02■□□□□ 0.8
SNED1-202ENST00000342631 DBNLQ9UJU6 430 aaKnown RBP20.02■□□□□ 0.8
SNED1-202ENST00000342631 KCNA3P22001 575 aa20.02■□□□□ 0.79
SNED1-202ENST00000342631 SKAP1Q86WV1 359 aa20.02■□□□□ 0.79
SNED1-202ENST00000342631 CACNA1SQ13698 1873 aa20.01■□□□□ 0.79
SNED1-202ENST00000342631 A0A0G2JLW4 131 aa20.01■□□□□ 0.79
SNED1-202ENST00000342631 XAGE2Q96GT9 111 aa20.01■□□□□ 0.79
SNED1-202ENST00000342631 PIM2Q9P1W9 311 aa20.01■□□□□ 0.79
SNED1-202ENST00000342631 SLX4Q8IY92 1834 aa20.01■□□□□ 0.79
SNED1-202ENST00000342631 ATP2B4P23634 1241 aa20■□□□□ 0.79
SNED1-202ENST00000342631 KCNJ4P48050 445 aa20■□□□□ 0.79
SNED1-202ENST00000342631 DBNDD2Q9BQY9 259 aa20■□□□□ 0.79
SNED1-202ENST00000342631 GLRX3O76003 335 aaKnown RBP20■□□□□ 0.79
SNED1-202ENST00000342631 CCDC158Q5M9N0 1113 aa20■□□□□ 0.79
SNED1-202ENST00000342631 GORABQ5T7V8 394 aa20■□□□□ 0.79
SNED1-202ENST00000342631 PPP1R1BQ9UD71 204 aaPredicted RBP20■□□□□ 0.79
SNED1-202ENST00000342631 ZNF804BA4D1E1 1349 aa19.99■□□□□ 0.79
SNED1-202ENST00000342631 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
SNED1-202ENST00000342631 NSFL1CQ9UNZ2 370 aaKnown RBP19.99■□□□□ 0.79
SNED1-202ENST00000342631 BRCA1P38398 1863 aaKnown RBP19.99■□□□□ 0.79
SNED1-202ENST00000342631 LTBP1Q14766 1721 aa19.98■□□□□ 0.79
SNED1-202ENST00000342631 ATP5JP18859 108 aa19.98■□□□□ 0.79
SNED1-202ENST00000342631 GPSM2P81274 684 aa19.98■□□□□ 0.79
SNED1-202ENST00000342631 BMP2KLQ5H9B9 411 aa19.98■□□□□ 0.79
SNED1-202ENST00000342631 TTC22Q5TAA0 569 aa19.98■□□□□ 0.79
SNED1-202ENST00000342631 SOGA3Q5TF21 947 aa19.98■□□□□ 0.79
SNED1-202ENST00000342631 C15orf52Q6ZUT6 534 aaKnown RBP19.98■□□□□ 0.79
SNED1-202ENST00000342631 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms