RNA–Protein interactions for RNA: ENST00000342220.9

COL18A1-201, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 3,386 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-201ENST00000342220 IL15P40933 162 aaPredicted RBP15.65■□□□□ 0.1
COL18A1-201ENST00000342220 ATP2B3Q16720 1220 aa15.65■□□□□ 0.1
COL18A1-201ENST00000342220 TBC1D9BQ66K14 1250 aa15.65■□□□□ 0.1
COL18A1-201ENST00000342220 COPRSQ9NQ92 184 aa15.65■□□□□ 0.1
COL18A1-201ENST00000342220 TNS2Q63HR2 1409 aa15.65■□□□□ 0.1
COL18A1-201ENST00000342220 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
COL18A1-201ENST00000342220 MTX1Q13505 466 aa15.64■□□□□ 0.09
COL18A1-201ENST00000342220 CACNA1FO60840 1977 aa15.64■□□□□ 0.09
COL18A1-201ENST00000342220 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.64■□□□□ 0.09
COL18A1-201ENST00000342220 KDM4AO75164 1064 aa15.64■□□□□ 0.09
COL18A1-201ENST00000342220 A0A0D9SFI3 127 aa15.64■□□□□ 0.09
COL18A1-201ENST00000342220 RFX5P48382 616 aaPredicted RBP15.64■□□□□ 0.09
COL18A1-201ENST00000342220 PTH1RQ03431 593 aa15.64■□□□□ 0.09
COL18A1-201ENST00000342220 XAGE2Q96GT9 111 aa15.64■□□□□ 0.09
COL18A1-201ENST00000342220 ST18O60284 1047 aa15.63■□□□□ 0.09
COL18A1-201ENST00000342220 BAG4O95429 457 aaKnown RBP15.63■□□□□ 0.09
COL18A1-201ENST00000342220 IGHMBP2P38935 993 aaKnown RBP15.63■□□□□ 0.09
COL18A1-201ENST00000342220 TRAPPC3LQ5T215 181 aa15.63■□□□□ 0.09
COL18A1-201ENST00000342220 RUFY2Q8WXA3 655 aa15.63■□□□□ 0.09
COL18A1-201ENST00000342220 ARHGEF1Q92888 912 aaKnown RBP15.63■□□□□ 0.09
COL18A1-201ENST00000342220 CHMP4CQ96CF2 233 aa15.63■□□□□ 0.09
COL18A1-201ENST00000342220 ISY1Q9ULR0 285 aaKnown RBP15.63■□□□□ 0.09
COL18A1-201ENST00000342220 PDE8AO60658 829 aa15.63■□□□□ 0.09
COL18A1-201ENST00000342220 CASP7P55210 303 aa15.63■□□□□ 0.09
COL18A1-201ENST00000342220 SLC4A8Q2Y0W8 1093 aa15.63■□□□□ 0.09
COL18A1-201ENST00000342220 FOSBP53539 338 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 HAND2P61296 217 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 LRRC2Q9BYS8 371 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 STK3Q13188 491 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 ATG9AQ7Z3C6 839 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 SLC51AQ86UW1 340 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 EVI5LQ96CN4 794 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 JAKMIP1Q96N16 626 aaKnown RBP15.62■□□□□ 0.09
COL18A1-201ENST00000342220 CAMTA2O94983 1202 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 PTMSP20962 102 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 CHAF1AQ13111 956 aaPredicted RBP15.62■□□□□ 0.09
COL18A1-201ENST00000342220 KLHL34Q8N239 644 aa15.62■□□□□ 0.09
COL18A1-201ENST00000342220 SCN11AQ9UI33 1791 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 GOLGA6L22H0YM25 854 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 CASTP20810 708 aaKnown RBP15.61■□□□□ 0.09
COL18A1-201ENST00000342220 TOMM22Q9NS69 142 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 AHDC1Q5TGY3 1603 aaPredicted RBP15.61■□□□□ 0.09
COL18A1-201ENST00000342220 NCLP19338 710 aaKnown RBP15.61■□□□□ 0.09
COL18A1-201ENST00000342220 PKP1Q13835 747 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 SCARF1Q14162 830 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 C3orf67Q6ZVT6 689 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 FBXW7Q969H0 707 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 DDX49Q9Y6V7 483 aaKnown RBP15.61■□□□□ 0.09
COL18A1-201ENST00000342220 COL15A1P39059 1388 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 ZAP70P43403 619 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 LRRC4BQ9NT99 713 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 STAP2Q9UGK3 403 aa15.61■□□□□ 0.09
COL18A1-201ENST00000342220 LRP6O75581 1613 aa15.6■□□□□ 0.09
COL18A1-201ENST00000342220 ZNF589Q86UQ0 364 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-201ENST00000342220 OSBPL3Q9H4L5 887 aa15.6■□□□□ 0.09
COL18A1-201ENST00000342220 SHANK3Q9BYB0 1731 aa15.6■□□□□ 0.09
COL18A1-201ENST00000342220 DISP2A7MBM2 1401 aa15.6■□□□□ 0.09
COL18A1-201ENST00000342220 GPR101Q96P66 508 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-201ENST00000342220 PAG1Q9NWQ8 432 aa15.6■□□□□ 0.09
COL18A1-201ENST00000342220 PPP1R1BQ9UD71 204 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-201ENST00000342220 RABL6Q3YEC7 729 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-201ENST00000342220 CCDC152Q4G0S7 254 aa15.59■□□□□ 0.09
COL18A1-201ENST00000342220 MCTP1Q6DN14 999 aa15.59■□□□□ 0.09
COL18A1-201ENST00000342220 CLEC17AQ6ZS10 378 aa15.59■□□□□ 0.09
COL18A1-201ENST00000342220 CHST3Q7LGC8 479 aa15.59■□□□□ 0.09
COL18A1-201ENST00000342220 RASEFQ8IZ41 740 aa15.59■□□□□ 0.09
COL18A1-201ENST00000342220 ZGPATQ8N5A5 531 aaKnown RBP15.59■□□□□ 0.09
COL18A1-201ENST00000342220 CHAMP1Q96JM3 812 aa15.59■□□□□ 0.09
COL18A1-201ENST00000342220 TTC41PQ6P2S7 1318 aa15.59■□□□□ 0.09
COL18A1-201ENST00000342220 PHKA1P46020 1223 aa15.59■□□□□ 0.09
COL18A1-201ENST00000342220 RAB11FIP4Q86YS3 637 aa15.59■□□□□ 0.09
COL18A1-201ENST00000342220 UTYO14607 1347 aa15.58■□□□□ 0.09
COL18A1-201ENST00000342220 BCAMP50895 628 aa15.58■□□□□ 0.09
COL18A1-201ENST00000342220 NLRP3Q96P20 1036 aa15.58■□□□□ 0.09
COL18A1-201ENST00000342220 SGSM2O43147 1006 aa15.58■□□□□ 0.08
COL18A1-201ENST00000342220 HSP90B1P14625 803 aaKnown RBP15.58■□□□□ 0.08
COL18A1-201ENST00000342220 ZKSCAN1P17029 563 aaPredicted RBP15.58■□□□□ 0.08
COL18A1-201ENST00000342220 ANKIB1Q9P2G1 1089 aa15.58■□□□□ 0.08
COL18A1-201ENST00000342220 WNK3Q9BYP7 1800 aa15.58■□□□□ 0.08
COL18A1-201ENST00000342220 RBM8AQ9Y5S9 174 aaKnown RBP15.58■□□□□ 0.08
COL18A1-201ENST00000342220 SALL3Q9BXA9 1300 aa15.57■□□□□ 0.08
COL18A1-201ENST00000342220 GYG1P46976 350 aa15.57■□□□□ 0.08
COL18A1-201ENST00000342220 NUCB2P80303 420 aa15.57■□□□□ 0.08
COL18A1-201ENST00000342220 KLHL40Q2TBA0 621 aa15.57■□□□□ 0.08
COL18A1-201ENST00000342220 PLCH1Q4KWH8 1693 aa15.57■□□□□ 0.08
COL18A1-201ENST00000342220 PXDNLA1KZ92 1463 aa15.57■□□□□ 0.08
COL18A1-201ENST00000342220 ANKRD18AQ8IVF6 992 aa15.57■□□□□ 0.08
COL18A1-201ENST00000342220 AKAP2Q9Y2D5 859 aa15.57■□□□□ 0.08
COL18A1-201ENST00000342220 SLIT2O94813 1529 aa15.57■□□□□ 0.08
COL18A1-201ENST00000342220 COL16A1Q07092 1604 aaPredicted RBP15.57■□□□□ 0.08
COL18A1-201ENST00000342220 VPS53Q5VIR6 699 aa15.56■□□□□ 0.08
COL18A1-201ENST00000342220 TPTE2Q6XPS3 522 aa15.56■□□□□ 0.08
COL18A1-201ENST00000342220 CELF1Q92879 486 aaKnown RBP15.56■□□□□ 0.08
COL18A1-201ENST00000342220 C5P01031 1676 aa15.56■□□□□ 0.08
COL18A1-201ENST00000342220 KCPQ6ZWJ8 1503 aa15.56■□□□□ 0.08
COL18A1-201ENST00000342220 CYP2E1P05181 493 aaPredicted RBP15.56■□□□□ 0.08
COL18A1-201ENST00000342220 RXRBP28702 533 aa15.56■□□□□ 0.08
COL18A1-201ENST00000342220 ZNF34Q8IZ26 560 aa15.56■□□□□ 0.08
COL18A1-201ENST00000342220 MRC1P22897 1456 aa15.56■□□□□ 0.08
COL18A1-201ENST00000342220 ERVV-1B6SEH8 477 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms