RNA–Protein interactions for RNA: ENST00000341697.7

SEMA6C-201, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 5,262 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-201ENST00000341697 RIMBP2O15034 1052 aa22.7■■□□□ 1.23
SEMA6C-201ENST00000341697 GCKRQ14397 625 aa22.7■■□□□ 1.23
SEMA6C-201ENST00000341697 SYCE3A1L190 88 aa22.7■■□□□ 1.22
SEMA6C-201ENST00000341697 BAG4O95429 457 aaKnown RBP22.7■■□□□ 1.22
SEMA6C-201ENST00000341697 TNPO1Q92973 898 aaKnown RBP22.7■■□□□ 1.22
SEMA6C-201ENST00000341697 DEF6Q9H4E7 631 aa22.7■■□□□ 1.22
SEMA6C-201ENST00000341697 DENND2AQ9ULE3 1009 aa22.7■■□□□ 1.22
SEMA6C-201ENST00000341697 LRRC2Q9BYS8 371 aa22.7■■□□□ 1.22
SEMA6C-201ENST00000341697 A0A1B0GUL7 405 aa22.69■■□□□ 1.22
SEMA6C-201ENST00000341697 CCDC183Q5T5S1 534 aa22.69■■□□□ 1.22
SEMA6C-201ENST00000341697 RAD50Q92878 1312 aa22.69■■□□□ 1.22
SEMA6C-201ENST00000341697 GIGYF1O75420 1035 aaPredicted RBP22.69■■□□□ 1.22
SEMA6C-201ENST00000341697 TCEANC2Q96MN5 208 aa22.69■■□□□ 1.22
SEMA6C-201ENST00000341697 PUM3Q15397 648 aaKnown RBP22.69■■□□□ 1.22
SEMA6C-201ENST00000341697 PLA2R1Q13018 1463 aa22.69■■□□□ 1.22
SEMA6C-201ENST00000341697 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.68■■□□□ 1.221e-6■■■□□ 16.7
SEMA6C-201ENST00000341697 GNAQP50148 359 aa22.68■■□□□ 1.22
SEMA6C-201ENST00000341697 MIGA1Q8NAN2 632 aa22.68■■□□□ 1.22
SEMA6C-201ENST00000341697 ANO10Q9NW15 660 aa22.68■■□□□ 1.22
SEMA6C-201ENST00000341697 TIMM10P62072 90 aa22.68■■□□□ 1.22
SEMA6C-201ENST00000341697 ARGLU1Q9NWB6 273 aaPredicted RBP22.68■■□□□ 1.22
SEMA6C-201ENST00000341697 MATR3P43243 847 aaKnown RBP eCLIP22.68■■□□□ 1.22
SEMA6C-201ENST00000341697 RTN1Q16799 776 aa22.68■■□□□ 1.22
SEMA6C-201ENST00000341697 TNNI3KQ59H18 835 aa22.68■■□□□ 1.22
SEMA6C-201ENST00000341697 FPGT-TNNI3KV9GXZ4 949 aa22.68■■□□□ 1.22
SEMA6C-201ENST00000341697 NECAB1Q8N987 351 aa22.67■■□□□ 1.22
SEMA6C-201ENST00000341697 TFIP11Q9UBB9 837 aaKnown RBP22.67■■□□□ 1.22
SEMA6C-201ENST00000341697 PRR36Q9H6K5 1346 aa22.67■■□□□ 1.22
SEMA6C-201ENST00000341697 SUCLG2Q96I99 432 aa22.67■■□□□ 1.22
SEMA6C-201ENST00000341697 PPFIA3O75145 1194 aa22.67■■□□□ 1.22
SEMA6C-201ENST00000341697 MCM9Q9NXL9 1143 aa22.67■■□□□ 1.22
SEMA6C-201ENST00000341697 RTL1A6NKG5 1358 aa22.67■■□□□ 1.22
SEMA6C-201ENST00000341697 CTAGE5O15320 804 aa22.67■■□□□ 1.22
SEMA6C-201ENST00000341697 Q6ZUG5 572 aa22.67■■□□□ 1.22
SEMA6C-201ENST00000341697 CARD10Q9BWT7 1032 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 SYNMO15061 1565 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 PAXIP1Q6ZW49 1069 aaPredicted RBP22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 TXLNBQ8N3L3 684 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 CHMLP26374 656 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 TRAF1Q13077 416 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 ZSCAN16Q9H4T2 348 aaPredicted RBP22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 TCP11L1Q9NUJ3 509 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 PRC1O43663 620 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 PPP1R12BO60237 982 aaPredicted RBP22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 NBPF7P0C2Y1 421 aaPredicted RBP22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 FSIP1Q8NA03 581 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 UFL1O94874 794 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 CNNM3Q8NE01 707 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 WWC3Q9ULE0 1092 aa22.66■■□□□ 1.22
SEMA6C-201ENST00000341697 CCDC171Q6TFL3 1326 aa22.65■■□□□ 1.22
SEMA6C-201ENST00000341697 IQGAP3Q86VI3 1631 aa22.65■■□□□ 1.22
SEMA6C-201ENST00000341697 KCNQ3O43525 872 aa22.65■■□□□ 1.22
SEMA6C-201ENST00000341697 APBA3O96018 575 aa22.65■■□□□ 1.22
SEMA6C-201ENST00000341697 KLHDC4Q8TBB5 520 aa22.65■■□□□ 1.22
SEMA6C-201ENST00000341697 HIBADHP31937 336 aaKnown RBP22.65■■□□□ 1.22
SEMA6C-201ENST00000341697 NOM1Q5C9Z4 860 aaKnown RBP22.64■■□□□ 1.22
SEMA6C-201ENST00000341697 RBM25P49756 843 aaKnown RBP22.64■■□□□ 1.21
SEMA6C-201ENST00000341697 PPP4R3AQ6IN85 833 aa22.64■■□□□ 1.21
SEMA6C-201ENST00000341697 HELLSQ9NRZ9 838 aa22.64■■□□□ 1.21
SEMA6C-201ENST00000341697 DDX19AQ9NUU7 478 aaKnown RBP22.64■■□□□ 1.21
SEMA6C-201ENST00000341697 EIF5P55010 431 aaKnown RBP22.64■■□□□ 1.21
SEMA6C-201ENST00000341697 TCIRG1Q13488 830 aa22.64■■□□□ 1.21
SEMA6C-201ENST00000341697 VEZTQ9HBM0 779 aa22.64■■□□□ 1.21
SEMA6C-201ENST00000341697 MAP3K4Q9Y6R4 1608 aa22.64■■□□□ 1.21
SEMA6C-201ENST00000341697 ZNF594Q96JF6 807 aaPredicted RBP22.64■■□□□ 1.21
SEMA6C-201ENST00000341697 CFAP100Q494V2 611 aa22.63■■□□□ 1.21
SEMA6C-201ENST00000341697 CREB3L3Q68CJ9 461 aa22.63■■□□□ 1.21
SEMA6C-201ENST00000341697 DBNDD2Q9BQY9 259 aa22.63■■□□□ 1.21
SEMA6C-201ENST00000341697 IGSF1Q8N6C5 1336 aa22.63■■□□□ 1.21
SEMA6C-201ENST00000341697 XAGE2Q96GT9 111 aa22.63■■□□□ 1.21
SEMA6C-201ENST00000341697 ALG1Q9BT22 464 aa22.63■■□□□ 1.21
SEMA6C-201ENST00000341697 CCDC148Q8NFR7 591 aa22.63■■□□□ 1.21
SEMA6C-201ENST00000341697 CALML4Q96GE6 196 aa22.63■■□□□ 1.21
SEMA6C-201ENST00000341697 JAG2Q9Y219 1238 aa22.63■■□□□ 1.21
SEMA6C-201ENST00000341697 RDXP35241 583 aaKnown RBP22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 RUFY1Q96T51 708 aa22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 TSG101Q99816 390 aa22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 GGA1Q9UJY5 639 aa22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 ZNF335Q9H4Z2 1342 aaPredicted RBP22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 KLHL10Q6JEL2 608 aa22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 FILIP1Q7Z7B0 1213 aa22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 CALM1P0DP23 149 aa22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 CALM2P0DP24 149 aa22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 CALM3P0DP25 149 aa22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 C8orf34Q49A92 452 aa22.62■■□□□ 1.21
SEMA6C-201ENST00000341697 A2ML1A8K2U0 1454 aa22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 GDPD2Q9HCC8 539 aa22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 CLASP1Q7Z460 1538 aa22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 ERBB4Q15303 1308 aa22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 NEURL1BA8MQ27 555 aa22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 KIF20AO95235 890 aa22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 PYM1Q9BRP8 204 aaKnown RBP22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 UBA7P41226 1012 aa22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 PLEKHF1Q96S99 279 aa22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 KIF24Q5T7B8 1368 aa22.61■■□□□ 1.21
SEMA6C-201ENST00000341697 ZSCAN22P10073 491 aaPredicted RBP22.6■■□□□ 1.21
SEMA6C-201ENST00000341697 TRPC5Q9UL62 973 aaPredicted RBP22.6■■□□□ 1.21
SEMA6C-201ENST00000341697 PNMA6EA0A0J9YXQ4 647 aa22.6■■□□□ 1.21
SEMA6C-201ENST00000341697 MBD4O95243 580 aa22.6■■□□□ 1.21
SEMA6C-201ENST00000341697 MPNDQ8N594 471 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms