RNA–Protein interactions for RNA: ENST00000341316.6

SPG7-202, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 1 (best) BASIC

Gene SPG7, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-202ENST00000341316 FIBPO43427 364 aa23.93■■□□□ 1.42
SPG7-202ENST00000341316 SYNE4Q8N205 404 aa23.93■■□□□ 1.42
SPG7-202ENST00000341316 NEK1Q96PY6 1258 aa23.93■■□□□ 1.42
SPG7-202ENST00000341316 SLC4A9Q96Q91 983 aa23.93■■□□□ 1.42
SPG7-202ENST00000341316 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.93■■□□□ 1.42
SPG7-202ENST00000341316 STK3Q13188 491 aa23.93■■□□□ 1.42
SPG7-202ENST00000341316 KRT32Q14532 448 aa23.92■■□□□ 1.42
SPG7-202ENST00000341316 HLFQ16534 295 aa23.92■■□□□ 1.42
SPG7-202ENST00000341316 CCDC57Q2TAC2 916 aa23.92■■□□□ 1.42
SPG7-202ENST00000341316 KIF6Q6ZMV9 814 aa23.92■■□□□ 1.42
SPG7-202ENST00000341316 TEX13AQ9BXU3 409 aaPredicted RBP23.92■■□□□ 1.42
SPG7-202ENST00000341316 DISP2A7MBM2 1401 aa23.91■■□□□ 1.42
SPG7-202ENST00000341316 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.91■■□□□ 1.42
SPG7-202ENST00000341316 STOX1Q6ZVD7 989 aa23.91■■□□□ 1.42
SPG7-202ENST00000341316 ATP6V1DQ9Y5K8 247 aa23.91■■□□□ 1.42
SPG7-202ENST00000341316 PCCAP05165 728 aaPredicted RBP23.91■■□□□ 1.42
SPG7-202ENST00000341316 IFIT1P09914 478 aaKnown RBP23.91■■□□□ 1.42
SPG7-202ENST00000341316 LARP1BQ659C4 914 aaKnown RBP23.91■■□□□ 1.42
SPG7-202ENST00000341316 SYAP1Q96A49 352 aaPredicted RBP23.91■■□□□ 1.42
SPG7-202ENST00000341316 ADORA1P30542 326 aa23.9■■□□□ 1.42
SPG7-202ENST00000341316 ZMYM1Q5SVZ6 1142 aa23.9■■□□□ 1.42
SPG7-202ENST00000341316 RNF214Q8ND24 703 aa23.9■■□□□ 1.42
SPG7-202ENST00000341316 CEP126Q9P2H0 1117 aa23.9■■□□□ 1.42
SPG7-202ENST00000341316 STARD3NLO95772 234 aa23.9■■□□□ 1.42
SPG7-202ENST00000341316 CDC37L1Q7L3B6 337 aa23.9■■□□□ 1.42
SPG7-202ENST00000341316 HELLSQ9NRZ9 838 aa23.9■■□□□ 1.42
SPG7-202ENST00000341316 ITGB4P16144 1822 aa23.89■■□□□ 1.42
SPG7-202ENST00000341316 A0A0G2JLW4 131 aa23.89■■□□□ 1.42
SPG7-202ENST00000341316 UBE2HP62256 183 aa23.89■■□□□ 1.42
SPG7-202ENST00000341316 ZBTB38Q8NAP3 1195 aaPredicted RBP23.89■■□□□ 1.42
SPG7-202ENST00000341316 MAP3K15Q6ZN16 1313 aa23.89■■□□□ 1.42
SPG7-202ENST00000341316 CSF1RP07333 972 aa23.89■■□□□ 1.41
SPG7-202ENST00000341316 Q6ZUG5 572 aa23.89■■□□□ 1.41
SPG7-202ENST00000341316 KAT6BQ8WYB5 2073 aa23.88■■□□□ 1.41
SPG7-202ENST00000341316 GPTP24298 496 aa23.88■■□□□ 1.41
SPG7-202ENST00000341316 GIGYF2Q6Y7W6 1299 aaKnown RBP23.88■■□□□ 1.41
SPG7-202ENST00000341316 PLA2G12BQ9BX93 195 aa23.88■■□□□ 1.41
SPG7-202ENST00000341316 LRRC2Q9BYS8 371 aa23.88■■□□□ 1.41
SPG7-202ENST00000341316 BCL9O00512 1426 aa23.88■■□□□ 1.41
SPG7-202ENST00000341316 ZNF500O60304 480 aaPredicted RBP23.87■■□□□ 1.41
SPG7-202ENST00000341316 FERMT3Q86UX7 667 aa23.87■■□□□ 1.41
SPG7-202ENST00000341316 TSPY26PQ9H489 355 aa23.87■■□□□ 1.41
SPG7-202ENST00000341316 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.87■■□□□ 1.41
SPG7-202ENST00000341316 CYP19A1P11511 503 aaPredicted RBP23.87■■□□□ 1.41
SPG7-202ENST00000341316 ZKSCAN5Q9Y2L8 839 aa23.87■■□□□ 1.41
SPG7-202ENST00000341316 MAST3O60307 1309 aa23.87■■□□□ 1.41
SPG7-202ENST00000341316 FAM173BQ6P4H8 233 aa23.86■■□□□ 1.41
SPG7-202ENST00000341316 XAGE2Q96GT9 111 aa23.86■■□□□ 1.41
SPG7-202ENST00000341316 RNF113AO15541 343 aaKnown RBP23.86■■□□□ 1.41
SPG7-202ENST00000341316 FKBP4Q02790 459 aaKnown RBP eCLIP23.86■■□□□ 1.41
SPG7-202ENST00000341316 NLRP10Q86W26 655 aa23.86■■□□□ 1.41
SPG7-202ENST00000341316 DSCC1Q9BVC3 393 aa23.86■■□□□ 1.41
SPG7-202ENST00000341316 M0R2C6 588 aa23.85■■□□□ 1.41
SPG7-202ENST00000341316 JAK2O60674 1132 aa23.85■■□□□ 1.41
SPG7-202ENST00000341316 HSPD1P10809 573 aaKnown RBP23.85■■□□□ 1.41
SPG7-202ENST00000341316 SCARF1Q14162 830 aa23.85■■□□□ 1.41
SPG7-202ENST00000341316 GTF3C6Q969F1 213 aa23.85■■□□□ 1.41
SPG7-202ENST00000341316 ZBTB1Q9Y2K1 713 aa23.85■■□□□ 1.41
SPG7-202ENST00000341316 IFIT5Q13325 482 aaKnown RBP23.85■■□□□ 1.41
SPG7-202ENST00000341316 CCDC183Q5T5S1 534 aa23.85■■□□□ 1.41
SPG7-202ENST00000341316 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.85■■□□□ 1.41
SPG7-202ENST00000341316 PHF14O94880 888 aa23.84■■□□□ 1.41
SPG7-202ENST00000341316 BRF1Q92994 677 aa23.84■■□□□ 1.41
SPG7-202ENST00000341316 OSBP2Q969R2 916 aa23.84■■□□□ 1.41
SPG7-202ENST00000341316 SYTL4Q96C24 671 aaPredicted RBP23.84■■□□□ 1.41
SPG7-202ENST00000341316 CCDC39Q9UFE4 941 aa23.84■■□□□ 1.41
SPG7-202ENST00000341316 FBXO3Q9UK99 471 aa23.84■■□□□ 1.41
SPG7-202ENST00000341316 PDCP20941 246 aa23.83■■□□□ 1.41
SPG7-202ENST00000341316 TAF7LQ5H9L4 462 aa23.83■■□□□ 1.41
SPG7-202ENST00000341316 R3HCC1Q9Y3T6 440 aaKnown RBP23.83■■□□□ 1.41
SPG7-202ENST00000341316 COL14A1Q05707 1796 aaKnown RBP23.83■■□□□ 1.41
SPG7-202ENST00000341316 TTC39AQ5SRH9 613 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 TICAM2Q86XR7 235 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 TTLL11Q8NHH1 800 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 GREM2Q9H772 168 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 AKAP2Q9Y2D5 859 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 RIC1Q4ADV7 1423 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 GLIPR1L2Q4G1C9 344 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 CCDC158Q5M9N0 1113 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 GORABQ5T7V8 394 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 LRP6O75581 1613 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 CDHR2Q9BYE9 1310 aa23.82■■□□□ 1.4
SPG7-202ENST00000341316 HSP90B1P14625 803 aaKnown RBP23.81■■□□□ 1.4
SPG7-202ENST00000341316 TTLL5Q6EMB2 1281 aa23.81■■□□□ 1.4
SPG7-202ENST00000341316 PI16Q6UXB8 463 aa23.81■■□□□ 1.4
SPG7-202ENST00000341316 TTC6Q86TZ1 520 aa23.81■■□□□ 1.4
SPG7-202ENST00000341316 RIPOR2Q9Y4F9 1068 aa23.81■■□□□ 1.4
SPG7-202ENST00000341316 EXOC5O00471 708 aa23.81■■□□□ 1.4
SPG7-202ENST00000341316 SCRN1Q12765 414 aa23.81■■□□□ 1.4
SPG7-202ENST00000341316 DHX32Q7L7V1 743 aaKnown RBP23.81■■□□□ 1.4
SPG7-202ENST00000341316 COL16A1Q07092 1604 aaPredicted RBP23.8■■□□□ 1.4
SPG7-202ENST00000341316 E7EWF7 191 aa23.8■■□□□ 1.4
SPG7-202ENST00000341316 ITGA6P23229 1130 aa23.8■■□□□ 1.4
SPG7-202ENST00000341316 TERF1P54274 439 aa23.8■■□□□ 1.4
SPG7-202ENST00000341316 EXOSC10Q01780 885 aaKnown RBP23.8■■□□□ 1.4
SPG7-202ENST00000341316 SPEF2Q9C093 1822 aa23.8■■□□□ 1.4
SPG7-202ENST00000341316 LAMA4Q16363 1823 aa23.8■■□□□ 1.4
SPG7-202ENST00000341316 FOXP2O15409 715 aa23.8■■□□□ 1.4
SPG7-202ENST00000341316 MCM5P33992 734 aa23.8■■□□□ 1.4
SPG7-202ENST00000341316 CSPP1Q1MSJ5 1256 aa23.8■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms