RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 PRDM1O75626 825 aa17.09■□□□□ 0.33
RET-201ENST00000340058 UQCRHP07919 91 aa17.09■□□□□ 0.33
RET-201ENST00000340058 HOXB7P09629 217 aa17.09■□□□□ 0.33
RET-201ENST00000340058 EPS15P42566 896 aa17.09■□□□□ 0.33
RET-201ENST00000340058 TMX1Q9H3N1 280 aa17.09■□□□□ 0.33
RET-201ENST00000340058 TLR7Q9NYK1 1049 aaKnown RBP17.09■□□□□ 0.33
RET-201ENST00000340058 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
RET-201ENST00000340058 RUFY3Q7L099 469 aa17.08■□□□□ 0.33
RET-201ENST00000340058 CNNM3Q8NE01 707 aa17.08■□□□□ 0.33
RET-201ENST00000340058 SETD1BQ9UPS6 1966 aaKnown RBP17.08■□□□□ 0.33
RET-201ENST00000340058 CCDC196A0A1B0GTZ2 297 aa17.08■□□□□ 0.32
RET-201ENST00000340058 SLC27A2O14975 620 aa17.08■□□□□ 0.32
RET-201ENST00000340058 WASF1Q92558 559 aa17.08■□□□□ 0.32
RET-201ENST00000340058 XAGE2Q96GT9 111 aa17.08■□□□□ 0.32
RET-201ENST00000340058 AXIN2Q9Y2T1 843 aa17.08■□□□□ 0.32
RET-201ENST00000340058 UQCRFS1P1P0C7P4 283 aa17.08■□□□□ 0.32
RET-201ENST00000340058 CATIPQ7Z7H3 387 aa17.08■□□□□ 0.32
RET-201ENST00000340058 TTC12Q9H892 705 aaPredicted RBP17.08■□□□□ 0.32
RET-201ENST00000340058 PTPDC1A2A3K4 754 aa17.07■□□□□ 0.32
RET-201ENST00000340058 GNPATO15228 680 aa17.07■□□□□ 0.32
RET-201ENST00000340058 SF3B2Q13435 895 aaKnown RBP17.07■□□□□ 0.32
RET-201ENST00000340058 RNF41Q9H4P4 317 aaPredicted RBP17.07■□□□□ 0.32
RET-201ENST00000340058 WTAPQ15007 396 aa17.07■□□□□ 0.32
RET-201ENST00000340058 CCDC96Q2M329 555 aa17.07■□□□□ 0.32
RET-201ENST00000340058 NAA16Q6N069 864 aaPredicted RBP17.07■□□□□ 0.32
RET-201ENST00000340058 TANGO6Q9C0B7 1094 aa17.07■□□□□ 0.32
RET-201ENST00000340058 FAM135BQ49AJ0 1406 aa17.07■□□□□ 0.32
RET-201ENST00000340058 A0A0D9SFI3 127 aa17.07■□□□□ 0.32
RET-201ENST00000340058 LRRC24Q50LG9 513 aa17.07■□□□□ 0.32
RET-201ENST00000340058 PPFIBP1Q86W92 1011 aa17.06■□□□□ 0.32
RET-201ENST00000340058 C16orf45Q96MC5 204 aaPredicted RBP17.06■□□□□ 0.32
RET-201ENST00000340058 MYL10Q9BUA6 226 aa17.06■□□□□ 0.32
RET-201ENST00000340058 ANO10Q9NW15 660 aa17.06■□□□□ 0.32
RET-201ENST00000340058 MAGEC2Q9UBF1 373 aaPredicted RBP17.06■□□□□ 0.32
RET-201ENST00000340058 LMTK3Q96Q04 1460 aa17.06■□□□□ 0.32
RET-201ENST00000340058 JAK2O60674 1132 aa17.06■□□□□ 0.32
RET-201ENST00000340058 MBD4O95243 580 aa17.06■□□□□ 0.32
RET-201ENST00000340058 LRSAM1Q6UWE0 723 aa17.06■□□□□ 0.32
RET-201ENST00000340058 GOLGA6L1Q8N7Z2 621 aa17.06■□□□□ 0.32
RET-201ENST00000340058 DNAJC25Q9H1X3 360 aa17.06■□□□□ 0.32
RET-201ENST00000340058 PLXNC1O60486 1568 aa17.06■□□□□ 0.32
RET-201ENST00000340058 PLEKHG1Q9ULL1 1385 aa17.06■□□□□ 0.32
RET-201ENST00000340058 B4E1Z4 1266 aa17.06■□□□□ 0.32
RET-201ENST00000340058 ZFYP08048 801 aaPredicted RBP17.06■□□□□ 0.32
RET-201ENST00000340058 DHX32Q7L7V1 743 aaKnown RBP17.06■□□□□ 0.32
RET-201ENST00000340058 CLIP2Q9UDT6 1046 aa17.06■□□□□ 0.32
RET-201ENST00000340058 ZAP70P43403 619 aa17.06■□□□□ 0.32
RET-201ENST00000340058 AATKQ6ZMQ8 1374 aa17.05■□□□□ 0.32
RET-201ENST00000340058 PUS3Q9BZE2 481 aaKnown RBP17.05■□□□□ 0.32
RET-201ENST00000340058 DDX19AQ9NUU7 478 aaKnown RBP17.05■□□□□ 0.32
RET-201ENST00000340058 LRRIQ1Q96JM4 1722 aa17.05■□□□□ 0.32
RET-201ENST00000340058 SYNMO15061 1565 aa17.05■□□□□ 0.32
RET-201ENST00000340058 GADD45BO75293 160 aaPredicted RBP17.05■□□□□ 0.32
RET-201ENST00000340058 RASEFQ8IZ41 740 aa17.05■□□□□ 0.32
RET-201ENST00000340058 CCDC112Q8NEF3 446 aa17.05■□□□□ 0.32
RET-201ENST00000340058 BABAM1Q9NWV8 329 aa17.05■□□□□ 0.32
RET-201ENST00000340058 CCDC191Q8NCU4 936 aa17.05■□□□□ 0.32
RET-201ENST00000340058 ANO6Q4KMQ2 910 aa17.04■□□□□ 0.32
RET-201ENST00000340058 SH3TC1Q8TE82 1336 aa17.04■□□□□ 0.32
RET-201ENST00000340058 RAD50Q92878 1312 aa17.04■□□□□ 0.32
RET-201ENST00000340058 PICALMQ13492 652 aa17.04■□□□□ 0.32
RET-201ENST00000340058 TFCP2L1Q9NZI6 479 aa17.04■□□□□ 0.32
RET-201ENST00000340058 CCDC194A0A1B0GVG4 234 aa17.03■□□□□ 0.32
RET-201ENST00000340058 RIMBP2O15034 1052 aa17.03■□□□□ 0.32
RET-201ENST00000340058 ZNF771Q7L3S4 317 aaPredicted RBP17.03■□□□□ 0.32
RET-201ENST00000340058 ARMT1Q9H993 441 aa17.03■□□□□ 0.32
RET-201ENST00000340058 HECW2Q9P2P5 1572 aa17.03■□□□□ 0.32
RET-201ENST00000340058 AFMP43652 599 aa17.03■□□□□ 0.32
RET-201ENST00000340058 SFPQP23246 707 aaKnown RBP eCLIP17.02■□□□□ 0.32
RET-201ENST00000340058 ENOX2Q16206 610 aaKnown RBP17.02■□□□□ 0.32
RET-201ENST00000340058 ERCC4Q92889 916 aaPredicted RBP17.02■□□□□ 0.32
RET-201ENST00000340058 CDC42BPBQ9Y5S2 1711 aa17.02■□□□□ 0.32
RET-201ENST00000340058 GPAA1O43292 621 aa17.02■□□□□ 0.31
RET-201ENST00000340058 RTN1Q16799 776 aa17.02■□□□□ 0.31
RET-201ENST00000340058 KBTBD3Q8NAB2 608 aa17.02■□□□□ 0.31
RET-201ENST00000340058 SEC63Q9UGP8 760 aaKnown RBP17.02■□□□□ 0.31
RET-201ENST00000340058 NLRP1Q9C000 1473 aa17.02■□□□□ 0.31
RET-201ENST00000340058 hCG_1642624A0A1W2PR95 340 aa17.02■□□□□ 0.31
RET-201ENST00000340058 CAGE1Q8TC20 777 aa17.02■□□□□ 0.31
RET-201ENST00000340058 RBSNQ9H1K0 784 aa17.02■□□□□ 0.31
RET-201ENST00000340058 RTCBQ9Y3I0 505 aaKnown RBP17.02■□□□□ 0.31
RET-201ENST00000340058 A2ML1A8K2U0 1454 aa17.01■□□□□ 0.31
RET-201ENST00000340058 ADCK5Q3MIX3 580 aa17.01■□□□□ 0.31
RET-201ENST00000340058 MCM9Q9NXL9 1143 aa17.01■□□□□ 0.31
RET-201ENST00000340058 TPTE2Q6XPS3 522 aa17.01■□□□□ 0.31
RET-201ENST00000340058 ERBB3P21860 1342 aa17.01■□□□□ 0.31
RET-201ENST00000340058 PDIA4P13667 645 aaKnown RBP17.01■□□□□ 0.31
RET-201ENST00000340058 RPS6KB1P23443 525 aa17.01■□□□□ 0.31
RET-201ENST00000340058 ZNF76P36508 570 aa17.01■□□□□ 0.31
RET-201ENST00000340058 IFIT1BQ5T764 474 aaKnown RBP17.01■□□□□ 0.31
RET-201ENST00000340058 TRPM1Q7Z4N2 1603 aa17.01■□□□□ 0.31
RET-201ENST00000340058 IDEP14735 1019 aa17■□□□□ 0.31
RET-201ENST00000340058 HSPA4P34932 840 aa17■□□□□ 0.31
RET-201ENST00000340058 TMC6Q7Z403 805 aa17■□□□□ 0.31
RET-201ENST00000340058 KAT14Q9H8E8 782 aa17■□□□□ 0.31
RET-201ENST00000340058 IQGAP3Q86VI3 1631 aa17■□□□□ 0.31
RET-201ENST00000340058 A0A1B0GVL5 298 aa17■□□□□ 0.31
RET-201ENST00000340058 INTS4Q96HW7 963 aaKnown RBP17■□□□□ 0.31
RET-201ENST00000340058 SYKP43405 635 aa17■□□□□ 0.31
RET-201ENST00000340058 SKIDA1Q1XH10 827 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms