RNA–Protein interactions for RNA: ENST00000339948.3

ZNF648-201, Transcript of zinc finger protein 648, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF648, Length 3,649 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF648-201ENST00000339948 TPM4P67936 248 aa13.54□□□□□ -0.24
ZNF648-201ENST00000339948 ARAP3Q8WWN8 1544 aa13.54□□□□□ -0.24
ZNF648-201ENST00000339948 NEK11Q8NG66 645 aa13.54□□□□□ -0.24
ZNF648-201ENST00000339948 TDRD7Q8NHU6 1098 aaKnown RBP13.54□□□□□ -0.24
ZNF648-201ENST00000339948 LTKP29376 864 aa13.54□□□□□ -0.24
ZNF648-201ENST00000339948 ZC3H6P61129 1189 aaKnown RBP13.54□□□□□ -0.24
ZNF648-201ENST00000339948 DPCR1Q3MIW9 517 aa13.54□□□□□ -0.24
ZNF648-201ENST00000339948 USP32Q8NFA0 1604 aa13.54□□□□□ -0.24
ZNF648-201ENST00000339948 AOX1Q06278 1338 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 CCDC66A2RUB6 948 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 COPS6Q7L5N1 327 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 PLA2G4DQ86XP0 818 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 CYP21A2P08686 494 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 GYS2P54840 703 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 SPECC1Q5M775 1068 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 XAGE3Q8WTP9 111 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 ZNF396Q96N95 335 aaPredicted RBP13.53□□□□□ -0.24
ZNF648-201ENST00000339948 DDX41Q9UJV9 622 aaKnown RBP13.53□□□□□ -0.24
ZNF648-201ENST00000339948 CPLX3Q8WVH0 158 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
ZNF648-201ENST00000339948 UTP14AQ9BVJ6 771 aaKnown RBP13.53□□□□□ -0.24
ZNF648-201ENST00000339948 CTIFO43310 598 aaKnown RBP13.52□□□□□ -0.24
ZNF648-201ENST00000339948 KSR2Q6VAB6 950 aa13.52□□□□□ -0.24
ZNF648-201ENST00000339948 ZCCHC17Q9NP64 241 aaKnown RBP13.52□□□□□ -0.24
ZNF648-201ENST00000339948 NLRP2Q9NX02 1062 aa13.52□□□□□ -0.24
ZNF648-201ENST00000339948 PIK3C2BO00750 1634 aa13.52□□□□□ -0.24
ZNF648-201ENST00000339948 SLC3A2P08195 630 aaKnown RBP13.52□□□□□ -0.25
ZNF648-201ENST00000339948 TM6SF1Q9BZW5 370 aa13.52□□□□□ -0.25
ZNF648-201ENST00000339948 TAF5LO75529 589 aa13.52□□□□□ -0.25
ZNF648-201ENST00000339948 EPHA10Q5JZY3 1008 aa13.52□□□□□ -0.25
ZNF648-201ENST00000339948 TMCO3Q6UWJ1 677 aa13.52□□□□□ -0.25
ZNF648-201ENST00000339948 CARD6Q9BX69 1037 aa13.52□□□□□ -0.25
ZNF648-201ENST00000339948 ATP1A3P13637 1013 aa13.51□□□□□ -0.25
ZNF648-201ENST00000339948 NDUFA8P51970 172 aa13.51□□□□□ -0.25
ZNF648-201ENST00000339948 RESTQ13127 1097 aa13.51□□□□□ -0.25
ZNF648-201ENST00000339948 KARSQ15046 597 aaKnown RBP13.51□□□□□ -0.25
ZNF648-201ENST00000339948 PLEKHO1Q53GL0 409 aaPredicted RBP13.51□□□□□ -0.25
ZNF648-201ENST00000339948 RNF216Q9NWF9 866 aaPredicted RBP13.51□□□□□ -0.25
ZNF648-201ENST00000339948 A0A087WZG4 1122 aa13.51□□□□□ -0.25
ZNF648-201ENST00000339948 C8orf76Q96K31 380 aa13.51□□□□□ -0.25
ZNF648-201ENST00000339948 MLH3Q9UHC1 1453 aa13.51□□□□□ -0.25
ZNF648-201ENST00000339948 IGSF1Q8N6C5 1336 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 TERF2Q15554 542 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 DBNLQ9UJU6 430 aaKnown RBP13.5□□□□□ -0.25
ZNF648-201ENST00000339948 FRMPD1Q5SYB0 1578 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 LMTK2Q8IWU2 1503 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 KRT32Q14532 448 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 MRPS27Q92552 414 aaKnown RBP13.5□□□□□ -0.25
ZNF648-201ENST00000339948 IFT172Q9UG01 1749 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 SBNO1A3KN83 1393 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 GOLGA8BA8MQT2 603 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 ERO1AQ96HE7 468 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 TIGD1Q96MW7 591 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 CLIC4Q9Y696 253 aa13.5□□□□□ -0.25
ZNF648-201ENST00000339948 ARHGAP31Q2M1Z3 1444 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 GNG11P61952 73 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 ZNF594Q96JF6 807 aaPredicted RBP13.49□□□□□ -0.25
ZNF648-201ENST00000339948 ORC3Q9UBD5 711 aaPredicted RBP13.49□□□□□ -0.25
ZNF648-201ENST00000339948 PCDHA7Q9UN72 937 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 HDAC5Q9UQL6 1122 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 FAM160A1Q05DH4 1040 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 TAF7LQ5H9L4 462 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 KLHL10Q6JEL2 608 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 ARGLU1Q9NWB6 273 aaPredicted RBP13.49□□□□□ -0.25
ZNF648-201ENST00000339948 PES1O00541 588 aaKnown RBP13.49□□□□□ -0.25
ZNF648-201ENST00000339948 SLFN14P0C7P3 912 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 IQCB1Q15051 598 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 LMBR1LQ6UX01 489 aa13.49□□□□□ -0.25
ZNF648-201ENST00000339948 RALYLQ86SE5 291 aaKnown RBP13.49□□□□□ -0.25
ZNF648-201ENST00000339948 ZSCAN16Q9H4T2 348 aaPredicted RBP13.49□□□□□ -0.25
ZNF648-201ENST00000339948 UBASH3AP57075 661 aa13.48□□□□□ -0.25
ZNF648-201ENST00000339948 MCMDC2Q4G0Z9 681 aa13.48□□□□□ -0.25
ZNF648-201ENST00000339948 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.48□□□□□ -0.25
ZNF648-201ENST00000339948 KLF18A0A0U1RQI7 1052 aa13.48□□□□□ -0.25
ZNF648-201ENST00000339948 PHACTR2O75167 634 aa13.48□□□□□ -0.25
ZNF648-201ENST00000339948 BMS1Q14692 1282 aaKnown RBP13.48□□□□□ -0.25
ZNF648-201ENST00000339948 NFXL1Q6ZNB6 911 aa13.48□□□□□ -0.25
ZNF648-201ENST00000339948 CERS3Q8IU89 383 aa13.48□□□□□ -0.25
ZNF648-201ENST00000339948 TTC5Q8N0Z6 440 aa13.48□□□□□ -0.25
ZNF648-201ENST00000339948 LINS1Q8NG48 757 aa13.48□□□□□ -0.25
ZNF648-201ENST00000339948 TRIM34Q9BYJ4 488 aa13.48□□□□□ -0.25
ZNF648-201ENST00000339948 CLCN6P51797 869 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 PPP1R13BQ96KQ4 1090 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 AIFM3Q96NN9 605 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 DESI2Q9BSY9 194 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 U3KPZ7 1027 aaPredicted RBP13.47□□□□□ -0.25
ZNF648-201ENST00000339948 ELP1O95163 1332 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 TTC21AQ8NDW8 1320 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 ARHGEF10O15013 1369 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 STOX1Q6ZVD7 989 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 SIGLEC1Q9BZZ2 1709 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 PLEKHG3A1L390 1219 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 TOP1P11387 765 aaKnown RBP13.47□□□□□ -0.25
ZNF648-201ENST00000339948 LMAN1P49257 510 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 RBM6P78332 1123 aaKnown RBP13.47□□□□□ -0.25
ZNF648-201ENST00000339948 CCZ1BP86790 482 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 CCZ1P86791 482 aaPredicted RBP13.47□□□□□ -0.25
ZNF648-201ENST00000339948 GABPB1Q06547 395 aaPredicted RBP13.47□□□□□ -0.25
ZNF648-201ENST00000339948 MCM6Q14566 821 aa13.47□□□□□ -0.25
ZNF648-201ENST00000339948 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms