RNA–Protein interactions for RNA: ENST00000339140.4

FOXR2-201, Transcript of forkhead box R2, humanhuman

APPRIS P1 BASIC

Gene FOXR2, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR2-201ENST00000339140 CHMP4CQ96CF2 233 aa10.57□□□□□ -0.72
FOXR2-201ENST00000339140 TOB2Q14106 344 aaPredicted RBP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 BEND3Q5T5X7 828 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 C11orf57Q6ZUT1 292 aaPredicted RBP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 IPO4Q8TEX9 1081 aaKnown RBP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 GTF3C6Q969F1 213 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 LLPHQ9BRT6 129 aaKnown RBP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 TRMT1Q9NXH9 659 aaKnown RBP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 ALS2Q96Q42 1657 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 NBPF7P0C2Y1 421 aaPredicted RBP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 GPS2Q13227 327 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 CCDC93Q567U6 631 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 NAA16Q6N069 864 aaPredicted RBP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 TMCO3Q6UWJ1 677 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 TXLNBQ8N3L3 684 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 ZNF396Q96N95 335 aaPredicted RBP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 EYA1Q99502 592 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 ZNF446Q9NWS9 450 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 RCOR1Q9UKL0 485 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 USP16Q9Y5T5 823 aa10.56□□□□□ -0.72
FOXR2-201ENST00000339140 V9GYY5 206 aaPredicted RBP10.56□□□□□ -0.72
FOXR2-201ENST00000339140 JCADQ9P266 1359 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 ERICH4A6NGS2 130 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 SFPQP23246 707 aaKnown RBP eCLIP10.55□□□□□ -0.72
FOXR2-201ENST00000339140 AMPHP49418 695 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 FAM160A1Q05DH4 1040 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 PDE4CQ08493 712 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 NMIQ13287 307 aaPredicted RBP10.55□□□□□ -0.72
FOXR2-201ENST00000339140 ZRSR1Q15695 479 aaKnown RBP10.55□□□□□ -0.72
FOXR2-201ENST00000339140 KRT28Q7Z3Y7 464 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 CCAR1Q8IX12 1150 aaKnown RBP10.55□□□□□ -0.72
FOXR2-201ENST00000339140 DHX40Q8IX18 779 aaKnown RBP10.55□□□□□ -0.72
FOXR2-201ENST00000339140 BRF1Q92994 677 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 BPIFA3Q9BQP9 254 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 PHAXQ9H814 394 aaKnown RBP10.55□□□□□ -0.72
FOXR2-201ENST00000339140 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.55□□□□□ -0.72
FOXR2-201ENST00000339140 FHOD1Q9Y613 1164 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 ERBB3P21860 1342 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 PHLPP2Q6ZVD8 1323 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 ADCY9O60503 1353 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 MED23Q9ULK4 1368 aa10.55□□□□□ -0.72
FOXR2-201ENST00000339140 ALDH1L1O75891 902 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 PNMA6AP0CW24 399 aaPredicted RBP10.54□□□□□ -0.72
FOXR2-201ENST00000339140 CLCN6P51797 869 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 NLRP6P59044 892 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 ARID5BQ14865 1188 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 ABTB2Q8N961 1025 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 UBXN4Q92575 508 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 PPP1R13BQ96KQ4 1090 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 ERCC6LQ2NKX8 1250 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 MUM1L1Q5H9M0 696 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 AACSQ86V21 672 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 FAM227BQ96M60 508 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.54□□□□□ -0.72
FOXR2-201ENST00000339140 SLAIN2Q9P270 581 aa10.54□□□□□ -0.72
FOXR2-201ENST00000339140 NAP1L2Q9ULW6 460 aaPredicted RBP10.54□□□□□ -0.72
FOXR2-201ENST00000339140 PI4KAP2A4QPH2 592 aa10.53□□□□□ -0.72
FOXR2-201ENST00000339140 HMGB1P09429 215 aaKnown RBP10.53□□□□□ -0.72
FOXR2-201ENST00000339140 STK3Q13188 491 aa10.53□□□□□ -0.72
FOXR2-201ENST00000339140 ARHGAP29Q52LW3 1261 aa10.53□□□□□ -0.72
FOXR2-201ENST00000339140 USPL1Q5W0Q7 1092 aa10.53□□□□□ -0.72
FOXR2-201ENST00000339140 E4F1Q66K89 784 aaPredicted RBP10.53□□□□□ -0.72
FOXR2-201ENST00000339140 PI4KAP1Q8N8J0 262 aa10.53□□□□□ -0.72
FOXR2-201ENST00000339140 IL17REQ8NFR9 667 aa10.53□□□□□ -0.72
FOXR2-201ENST00000339140 FSD1Q9BTV5 496 aa10.53□□□□□ -0.72
FOXR2-201ENST00000339140 RFX7Q2KHR2 1363 aa10.53□□□□□ -0.72
FOXR2-201ENST00000339140 ZRANB2O95218 330 aaKnown RBP eCLIP10.52□□□□□ -0.72
FOXR2-201ENST00000339140 ETF1P62495 437 aaKnown RBP10.52□□□□□ -0.72
FOXR2-201ENST00000339140 NUTM2GQ5VZR2 741 aa10.52□□□□□ -0.72
FOXR2-201ENST00000339140 SYT10Q6XYQ8 523 aa10.52□□□□□ -0.72
FOXR2-201ENST00000339140 AOPEPQ8N6M6 819 aa10.52□□□□□ -0.72
FOXR2-201ENST00000339140 MNS1Q8NEH6 495 aa10.52□□□□□ -0.72
FOXR2-201ENST00000339140 ENGASEQ8NFI3 743 aa10.52□□□□□ -0.72
FOXR2-201ENST00000339140 SMARCC2Q8TAQ2 1214 aa10.52□□□□□ -0.72
FOXR2-201ENST00000339140 DDX54Q8TDD1 881 aaKnown RBP10.52□□□□□ -0.72
FOXR2-201ENST00000339140 NEK1Q96PY6 1258 aa10.52□□□□□ -0.72
FOXR2-201ENST00000339140 LTN1O94822 1766 aa10.52□□□□□ -0.72
FOXR2-201ENST00000339140 PXDNQ92626 1479 aa10.52□□□□□ -0.72
FOXR2-201ENST00000339140 SLIT3O75094 1523 aa10.52□□□□□ -0.73
FOXR2-201ENST00000339140 NHSL1Q5SYE7 1610 aa10.52□□□□□ -0.73
FOXR2-201ENST00000339140 PHRF1Q9P1Y6 1649 aaKnown RBP10.52□□□□□ -0.73
FOXR2-201ENST00000339140 EFCAB8A8MWE9 144 aa10.52□□□□□ -0.73
FOXR2-201ENST00000339140 HSP90B1P14625 803 aaKnown RBP10.52□□□□□ -0.73
FOXR2-201ENST00000339140 HNRNPH2P55795 449 aaKnown RBP10.52□□□□□ -0.73
FOXR2-201ENST00000339140 G3BP1Q13283 466 aaKnown RBP eCLIP10.52□□□□□ -0.73
FOXR2-201ENST00000339140 CCDC158Q5M9N0 1113 aa10.52□□□□□ -0.73
FOXR2-201ENST00000339140 BRINP3Q76B58 766 aa10.52□□□□□ -0.73
FOXR2-201ENST00000339140 HOMER1Q86YM7 354 aa10.52□□□□□ -0.73
FOXR2-201ENST00000339140 C9orf78Q9NZ63 289 aaPredicted RBP10.52□□□□□ -0.73
FOXR2-201ENST00000339140 CWC15Q9P013 229 aaKnown RBP10.52□□□□□ -0.73
FOXR2-201ENST00000339140 U3KPZ7 1027 aaPredicted RBP10.52□□□□□ -0.73
FOXR2-201ENST00000339140 A0A0D9SFI3 127 aa10.51□□□□□ -0.73
FOXR2-201ENST00000339140 JAK2O60674 1132 aa10.51□□□□□ -0.73
FOXR2-201ENST00000339140 DTNBO60941 627 aa10.51□□□□□ -0.73
FOXR2-201ENST00000339140 PLA2G4AP47712 749 aa10.51□□□□□ -0.73
FOXR2-201ENST00000339140 NBPF11Q86T75 865 aa10.51□□□□□ -0.73
FOXR2-201ENST00000339140 FCHSD1Q86WN1 690 aa10.51□□□□□ -0.73
FOXR2-201ENST00000339140 MRPS27Q92552 414 aaKnown RBP10.51□□□□□ -0.73
FOXR2-201ENST00000339140 ORC3Q9UBD5 711 aaPredicted RBP10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms