RNA–Protein interactions for RNA: ENST00000338888.3

RUNX3-202, Transcript of runt related transcription factor 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RUNX3, Length 2,629 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-202ENST00000338888 CEP57L1Q8IYX8 460 aa23.81■■□□□ 1.4
RUNX3-202ENST00000338888 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.81■■□□□ 1.4
RUNX3-202ENST00000338888 CACNA1FO60840 1977 aa23.81■■□□□ 1.4
RUNX3-202ENST00000338888 HSP90B1P14625 803 aaKnown RBP23.81■■□□□ 1.4
RUNX3-202ENST00000338888 ADD1P35611 737 aaKnown RBP23.81■■□□□ 1.4
RUNX3-202ENST00000338888 ZNF589Q86UQ0 364 aaPredicted RBP23.81■■□□□ 1.4
RUNX3-202ENST00000338888 ZKSCAN7Q9P0L1 754 aaPredicted RBP23.81■■□□□ 1.4
RUNX3-202ENST00000338888 FLT4P35916 1363 aa23.81■■□□□ 1.4
RUNX3-202ENST00000338888 N4BP2Q86UW6 1770 aaPredicted RBP23.81■■□□□ 1.4
RUNX3-202ENST00000338888 IPO4Q8TEX9 1081 aaKnown RBP23.8■■□□□ 1.4
RUNX3-202ENST00000338888 OSBPL5Q9H0X9 879 aaPredicted RBP23.8■■□□□ 1.4
RUNX3-202ENST00000338888 POLR3GO15318 223 aaPredicted RBP23.8■■□□□ 1.4
RUNX3-202ENST00000338888 TOPAZ1Q8N9V7 1692 aa23.8■■□□□ 1.4
RUNX3-202ENST00000338888 PLCD3Q8N3E9 789 aa23.8■■□□□ 1.4
RUNX3-202ENST00000338888 RCOR1Q9UKL0 485 aa23.8■■□□□ 1.4
RUNX3-202ENST00000338888 RGPD8O14715 1765 aaPredicted RBP23.79■■□□□ 1.4
RUNX3-202ENST00000338888 NUTM2GQ5VZR2 741 aa23.79■■□□□ 1.4
RUNX3-202ENST00000338888 ARMCX5Q6P1M9 558 aa23.79■■□□□ 1.4
RUNX3-202ENST00000338888 EAF2Q96CJ1 260 aaPredicted RBP23.79■■□□□ 1.4
RUNX3-202ENST00000338888 SLC20A2Q08357 652 aa23.79■■□□□ 1.4
RUNX3-202ENST00000338888 TMC6Q7Z403 805 aa23.79■■□□□ 1.4
RUNX3-202ENST00000338888 SBNO1A3KN83 1393 aa23.79■■□□□ 1.4
RUNX3-202ENST00000338888 SETD1BQ9UPS6 1966 aaKnown RBP23.78■■□□□ 1.4
RUNX3-202ENST00000338888 SMC2O95347 1197 aa23.78■■□□□ 1.4
RUNX3-202ENST00000338888 Q6ZUG5 572 aa23.78■■□□□ 1.4
RUNX3-202ENST00000338888 ERC1Q8IUD2 1116 aa23.78■■□□□ 1.4
RUNX3-202ENST00000338888 TLR7Q9NYK1 1049 aaKnown RBP23.78■■□□□ 1.4
RUNX3-202ENST00000338888 C9orf78Q9NZ63 289 aaPredicted RBP23.78■■□□□ 1.4
RUNX3-202ENST00000338888 MTX1Q13505 466 aa23.78■■□□□ 1.4
RUNX3-202ENST00000338888 HOMER1Q86YM7 354 aa23.78■■□□□ 1.4
RUNX3-202ENST00000338888 USP28Q96RU2 1077 aa23.78■■□□□ 1.4
RUNX3-202ENST00000338888 SNRKQ9NRH2 765 aa23.78■■□□□ 1.4
RUNX3-202ENST00000338888 ENGASEQ8NFI3 743 aa23.77■■□□□ 1.4
RUNX3-202ENST00000338888 LRRC2Q9BYS8 371 aa23.77■■□□□ 1.4
RUNX3-202ENST00000338888 XPO4Q9C0E2 1151 aaKnown RBP23.77■■□□□ 1.4
RUNX3-202ENST00000338888 IMPACTQ9P2X3 320 aa23.77■■□□□ 1.4
RUNX3-202ENST00000338888 TMCO3Q6UWJ1 677 aa23.77■■□□□ 1.4
RUNX3-202ENST00000338888 C14orf37Q86TY3 774 aa23.77■■□□□ 1.4
RUNX3-202ENST00000338888 FSIP1Q8NA03 581 aa23.77■■□□□ 1.4
RUNX3-202ENST00000338888 NEK11Q8NG66 645 aa23.77■■□□□ 1.4
RUNX3-202ENST00000338888 NAT10Q9H0A0 1025 aaKnown RBP23.77■■□□□ 1.4
RUNX3-202ENST00000338888 FAM160A1Q05DH4 1040 aa23.76■■□□□ 1.39
RUNX3-202ENST00000338888 UBXN4Q92575 508 aa23.76■■□□□ 1.39
RUNX3-202ENST00000338888 IFNKQ9P0W0 207 aa23.76■■□□□ 1.39
RUNX3-202ENST00000338888 HMG20BQ9P0W2 317 aa23.76■■□□□ 1.39
RUNX3-202ENST00000338888 PSDA5PKW4 1024 aaPredicted RBP23.76■■□□□ 1.39
RUNX3-202ENST00000338888 SASH1O94885 1247 aa23.76■■□□□ 1.39
RUNX3-202ENST00000338888 ZRANB2O95218 330 aaKnown RBP eCLIP23.76■■□□□ 1.39
RUNX3-202ENST00000338888 SFPQP23246 707 aaKnown RBP eCLIP23.76■■□□□ 1.39
RUNX3-202ENST00000338888 NEK1Q96PY6 1258 aa23.76■■□□□ 1.39
RUNX3-202ENST00000338888 DNAI1Q9UI46 699 aa23.76■■□□□ 1.39
RUNX3-202ENST00000338888 ME1P48163 572 aa23.75■■□□□ 1.39
RUNX3-202ENST00000338888 SCRN1Q12765 414 aa23.75■■□□□ 1.39
RUNX3-202ENST00000338888 TRIM34Q9BYJ4 488 aa23.75■■□□□ 1.39
RUNX3-202ENST00000338888 TSGA10IPQ3SY00 556 aa23.75■■□□□ 1.39
RUNX3-202ENST00000338888 LTV1Q96GA3 475 aaPredicted RBP23.75■■□□□ 1.39
RUNX3-202ENST00000338888 BABAM1Q9NWV8 329 aa23.75■■□□□ 1.39
RUNX3-202ENST00000338888 MED23Q9ULK4 1368 aa23.74■■□□□ 1.39
RUNX3-202ENST00000338888 PPFIA3O75145 1194 aa23.74■■□□□ 1.39
RUNX3-202ENST00000338888 TAF5LO75529 589 aa23.74■■□□□ 1.39
RUNX3-202ENST00000338888 RAD51AP2Q09MP3 1159 aa23.74■■□□□ 1.39
RUNX3-202ENST00000338888 CCDC150Q8NCX0 1101 aa23.74■■□□□ 1.39
RUNX3-202ENST00000338888 EDC3Q96F86 508 aaKnown RBP23.74■■□□□ 1.39
RUNX3-202ENST00000338888 SDF4Q9BRK5 362 aa23.74■■□□□ 1.39
RUNX3-202ENST00000338888 ARGLU1Q9NWB6 273 aaPredicted RBP23.74■■□□□ 1.39
RUNX3-202ENST00000338888 ORC3Q9UBD5 711 aaPredicted RBP23.74■■□□□ 1.39
RUNX3-202ENST00000338888 ZNF142P52746 1687 aaPredicted RBP23.74■■□□□ 1.39
RUNX3-202ENST00000338888 LRRC37A3O60309 1634 aa23.74■■□□□ 1.39
RUNX3-202ENST00000338888 SEC31AO94979 1220 aaKnown RBP23.74■■□□□ 1.39
RUNX3-202ENST00000338888 TEX35Q5T0J7 233 aa23.74■■□□□ 1.39
RUNX3-202ENST00000338888 FMNL2Q96PY5 1086 aa23.74■■□□□ 1.39
RUNX3-202ENST00000338888 FEZ2Q9UHY8 353 aaPredicted RBP23.73■■□□□ 1.39
RUNX3-202ENST00000338888 EIF4A1P60842 406 aaKnown RBP23.72■■□□□ 1.39
RUNX3-202ENST00000338888 G3BP1Q13283 466 aaKnown RBP eCLIP23.72■■□□□ 1.39
RUNX3-202ENST00000338888 DPCR1Q3MIW9 517 aa23.72■■□□□ 1.39
RUNX3-202ENST00000338888 KCNQ3O43525 872 aa23.72■■□□□ 1.39
RUNX3-202ENST00000338888 NLRP6P59044 892 aa23.72■■□□□ 1.39
RUNX3-202ENST00000338888 ETF1P62495 437 aaKnown RBP23.72■■□□□ 1.39
RUNX3-202ENST00000338888 KRT32Q14532 448 aa23.72■■□□□ 1.39
RUNX3-202ENST00000338888 SIL1Q9H173 461 aa23.72■■□□□ 1.39
RUNX3-202ENST00000338888 ZCCHC17Q9NP64 241 aaKnown RBP23.72■■□□□ 1.39
RUNX3-202ENST00000338888 TPM4P67936 248 aa23.71■■□□□ 1.39
RUNX3-202ENST00000338888 ST5P78524 1137 aa23.71■■□□□ 1.39
RUNX3-202ENST00000338888 GUCY1B3Q02153 619 aa23.71■■□□□ 1.39
RUNX3-202ENST00000338888 CWF19L2Q2TBE0 894 aaKnown RBP23.71■■□□□ 1.39
RUNX3-202ENST00000338888 MNS1Q8NEH6 495 aa23.71■■□□□ 1.39
RUNX3-202ENST00000338888 NALCNQ8IZF0 1738 aa23.71■■□□□ 1.39
RUNX3-202ENST00000338888 SMARCC2Q8TAQ2 1214 aa23.71■■□□□ 1.39
RUNX3-202ENST00000338888 A0A1B0GVL5 298 aa23.7■■□□□ 1.38
RUNX3-202ENST00000338888 EPC1Q9H2F5 836 aa23.7■■□□□ 1.38
RUNX3-202ENST00000338888 MAP3K2Q9Y2U5 619 aa23.7■■□□□ 1.38
RUNX3-202ENST00000338888 URI1O94763 535 aaPredicted RBP23.7■■□□□ 1.38
RUNX3-202ENST00000338888 USHBP1Q8N6Y0 703 aa23.7■■□□□ 1.38
RUNX3-202ENST00000338888 NRDCO43847 1150 aa23.69■■□□□ 1.38
RUNX3-202ENST00000338888 ZRSR1Q15695 479 aaKnown RBP23.69■■□□□ 1.38
RUNX3-202ENST00000338888 NAA16Q6N069 864 aaPredicted RBP23.69■■□□□ 1.38
RUNX3-202ENST00000338888 NSUN7Q8NE18 718 aaKnown RBP23.69■■□□□ 1.38
RUNX3-202ENST00000338888 ZNF396Q96N95 335 aaPredicted RBP23.69■■□□□ 1.38
RUNX3-202ENST00000338888 USPL1Q5W0Q7 1092 aa23.69■■□□□ 1.38
RUNX3-202ENST00000338888 FMR1NBQ8N0W7 255 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms