RNA–Protein interactions for RNA: ENST00000338193.10

PRIM1-201, Transcript of DNA primase subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRIM1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM1-201ENST00000338193 RPGRQ92834 1020 aaKnown RBP15.75■□□□□ 0.11
PRIM1-201ENST00000338193 MASTLQ96GX5 879 aa15.75■□□□□ 0.11
PRIM1-201ENST00000338193 LRRC37AA6NMS7 1700 aa15.75■□□□□ 0.11
PRIM1-201ENST00000338193 YBX3P16989 372 aaKnown RBP eCLIP15.75■□□□□ 0.112e-7■□□□□ 9.9
PRIM1-201ENST00000338193 ITGA6P23229 1130 aa15.75■□□□□ 0.11
PRIM1-201ENST00000338193 STYK1Q6J9G0 422 aa15.75■□□□□ 0.11
PRIM1-201ENST00000338193 UTRNP46939 3433 aa15.74■□□□□ 0.11
PRIM1-201ENST00000338193 RTL9Q8NET4 1388 aa15.74■□□□□ 0.11
PRIM1-201ENST00000338193 CCDC152Q4G0S7 254 aa15.74■□□□□ 0.11
PRIM1-201ENST00000338193 PRPF40BQ6NWY9 871 aaKnown RBP15.74■□□□□ 0.11
PRIM1-201ENST00000338193 CEP85Q6P2H3 762 aa15.74■□□□□ 0.11
PRIM1-201ENST00000338193 PA2G4Q9UQ80 394 aaKnown RBP15.74■□□□□ 0.11
PRIM1-201ENST00000338193 PCDHB15Q9Y5E8 787 aa15.74■□□□□ 0.11
PRIM1-201ENST00000338193 ARFGEF1Q9Y6D6 1849 aa15.74■□□□□ 0.11
PRIM1-201ENST00000338193 WTIPA6NIX2 430 aaPredicted RBP15.73■□□□□ 0.11
PRIM1-201ENST00000338193 GRAPQ13588 217 aa15.73■□□□□ 0.11
PRIM1-201ENST00000338193 DDX46Q7L014 1031 aaKnown RBP15.73■□□□□ 0.11
PRIM1-201ENST00000338193 GRAPLQ8TC17 118 aaPredicted RBP15.73■□□□□ 0.11
PRIM1-201ENST00000338193 C7orf43Q8WVR3 580 aa15.73■□□□□ 0.11
PRIM1-201ENST00000338193 RBM17Q96I25 401 aaKnown RBP15.73■□□□□ 0.11
PRIM1-201ENST00000338193 CRAMP1Q96RY5 1269 aa15.73■□□□□ 0.11
PRIM1-201ENST00000338193 PUS3Q9BZE2 481 aaKnown RBP15.73■□□□□ 0.11
PRIM1-201ENST00000338193 SNED1Q8TER0 1413 aa15.72■□□□□ 0.11
PRIM1-201ENST00000338193 PIM2Q9P1W9 311 aa15.72■□□□□ 0.11
PRIM1-201ENST00000338193 BCS1LQ9Y276 419 aa15.72■□□□□ 0.11
PRIM1-201ENST00000338193 LTBP1Q14766 1721 aa15.72■□□□□ 0.11
PRIM1-201ENST00000338193 DUOX1Q9NRD9 1551 aa15.71■□□□□ 0.11
PRIM1-201ENST00000338193 PPEF1O14829 653 aaPredicted RBP15.71■□□□□ 0.11
PRIM1-201ENST00000338193 C21orf2O43822 256 aa15.71■□□□□ 0.11
PRIM1-201ENST00000338193 PTPN12Q05209 780 aaKnown RBP15.71■□□□□ 0.11
PRIM1-201ENST00000338193 MTX1Q13505 466 aa15.71■□□□□ 0.11
PRIM1-201ENST00000338193 TTLL6Q8N841 843 aa15.71■□□□□ 0.11
PRIM1-201ENST00000338193 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.71■□□□□ 0.11
PRIM1-201ENST00000338193 SRGAP3O43295 1099 aa15.7■□□□□ 0.1
PRIM1-201ENST00000338193 MNX1P50219 401 aaPredicted RBP15.7■□□□□ 0.1
PRIM1-201ENST00000338193 RPS8P62241 208 aaKnown RBP15.7■□□□□ 0.1
PRIM1-201ENST00000338193 ATP8B2P98198 1209 aa15.7■□□□□ 0.1
PRIM1-201ENST00000338193 IFIT5Q13325 482 aaKnown RBP15.7■□□□□ 0.1
PRIM1-201ENST00000338193 LRRC24Q50LG9 513 aa15.7■□□□□ 0.1
PRIM1-201ENST00000338193 ANKRD18BA2A2Z9 1011 aa15.69■□□□□ 0.1
PRIM1-201ENST00000338193 HSP90B1P14625 803 aaKnown RBP15.69■□□□□ 0.1
PRIM1-201ENST00000338193 DALRD3Q5D0E6 543 aaKnown RBP15.69■□□□□ 0.1
PRIM1-201ENST00000338193 CNKSR1Q969H4 720 aa15.69■□□□□ 0.1
PRIM1-201ENST00000338193 SIL1Q9H173 461 aa15.69■□□□□ 0.1
PRIM1-201ENST00000338193 PDZRN3Q9UPQ7 1066 aa15.69■□□□□ 0.1
PRIM1-201ENST00000338193 FER1L6Q2WGJ9 1857 aa15.68■□□□□ 0.1
PRIM1-201ENST00000338193 SNAP23O00161 211 aa15.68■□□□□ 0.1
PRIM1-201ENST00000338193 ALDH1B1P30837 517 aa15.68■□□□□ 0.1
PRIM1-201ENST00000338193 CCDC57Q2TAC2 916 aa15.68■□□□□ 0.1
PRIM1-201ENST00000338193 ANKRD18AQ8IVF6 992 aa15.68■□□□□ 0.1
PRIM1-201ENST00000338193 SSH3Q8TE77 659 aa15.68■□□□□ 0.1
PRIM1-201ENST00000338193 PRELPP51888 382 aa15.67■□□□□ 0.1
PRIM1-201ENST00000338193 ASTLQ6HA08 431 aaPredicted RBP15.67■□□□□ 0.1
PRIM1-201ENST00000338193 ATG9AQ7Z3C6 839 aa15.67■□□□□ 0.1
PRIM1-201ENST00000338193 HELBQ8NG08 1087 aaPredicted RBP15.67■□□□□ 0.1
PRIM1-201ENST00000338193 GPR101Q96P66 508 aaPredicted RBP15.67■□□□□ 0.1
PRIM1-201ENST00000338193 ATP6V0A2Q9Y487 856 aa15.67■□□□□ 0.1
PRIM1-201ENST00000338193 GPSM2P81274 684 aa15.66■□□□□ 0.1
PRIM1-201ENST00000338193 RASSF7Q02833 373 aa15.66■□□□□ 0.1
PRIM1-201ENST00000338193 CDC5LQ99459 802 aaKnown RBP15.66■□□□□ 0.1
PRIM1-201ENST00000338193 MINPP1Q9UNW1 487 aa15.66■□□□□ 0.1
PRIM1-201ENST00000338193 RIPOR2Q9Y4F9 1068 aa15.66■□□□□ 0.1
PRIM1-201ENST00000338193 COL4A5P29400 1685 aa15.66■□□□□ 0.1
PRIM1-201ENST00000338193 NFKBIEO00221 500 aa15.65■□□□□ 0.1
PRIM1-201ENST00000338193 BBOX1O75936 387 aa15.65■□□□□ 0.1
PRIM1-201ENST00000338193 LDHAL6AQ6ZMR3 332 aa15.65■□□□□ 0.1
PRIM1-201ENST00000338193 BSDC1Q9NW68 430 aaPredicted RBP15.65■□□□□ 0.1
PRIM1-201ENST00000338193 METRNQ9UJH8 293 aa15.65■□□□□ 0.1
PRIM1-201ENST00000338193 SPDYE4A6NLX3 237 aa15.64■□□□□ 0.09
PRIM1-201ENST00000338193 TAF5LO75529 589 aa15.64■□□□□ 0.09
PRIM1-201ENST00000338193 IGHMBP2P38935 993 aaKnown RBP15.64■□□□□ 0.09
PRIM1-201ENST00000338193 CHRNDQ07001 517 aa15.64■□□□□ 0.09
PRIM1-201ENST00000338193 TAF7LQ5H9L4 462 aa15.64■□□□□ 0.09
PRIM1-201ENST00000338193 SP8Q8IXZ3 490 aa15.64■□□□□ 0.09
PRIM1-201ENST00000338193 COPRSQ9NQ92 184 aa15.64■□□□□ 0.09
PRIM1-201ENST00000338193 EXOC6BQ9Y2D4 811 aa15.64■□□□□ 0.09
PRIM1-201ENST00000338193 IGHDP01880 384 aa15.63■□□□□ 0.09
PRIM1-201ENST00000338193 KLRK1P26718 216 aa15.63■□□□□ 0.09
PRIM1-201ENST00000338193 RPAP2Q8IXW5 612 aaPredicted RBP15.63■□□□□ 0.09
PRIM1-201ENST00000338193 CNNM1Q9NRU3 951 aa15.63■□□□□ 0.09
PRIM1-201ENST00000338193 PCDH10Q9P2E7 1040 aa15.63■□□□□ 0.09
PRIM1-201ENST00000338193 HDAC5Q9UQL6 1122 aa15.63■□□□□ 0.09
PRIM1-201ENST00000338193 CCDC88AQ3V6T2 1871 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 EYA2O00167 538 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 SASH1O94885 1247 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 GPR162Q16538 588 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 VGLL2Q8N8G2 317 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 MPHOSPH8Q99549 860 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 POLLQ9UGP5 575 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 SBF1O95248 1867 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 CCDC93Q567U6 631 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 MS4A3Q96HJ5 214 aa15.62■□□□□ 0.09
PRIM1-201ENST00000338193 CHMP4BQ9H444 224 aaKnown RBP15.62■□□□□ 0.09
PRIM1-201ENST00000338193 NSFL1CQ9UNZ2 370 aaKnown RBP15.62■□□□□ 0.09
PRIM1-201ENST00000338193 SURF6O75683 361 aaKnown RBP15.61■□□□□ 0.09
PRIM1-201ENST00000338193 ARHGAP27Q6ZUM4 889 aa15.61■□□□□ 0.09
PRIM1-201ENST00000338193 TXNRD3Q86VQ6 643 aa15.61■□□□□ 0.09
PRIM1-201ENST00000338193 SLC39A7Q92504 469 aa15.61■□□□□ 0.09
PRIM1-201ENST00000338193 NOP58Q9Y2X3 529 aaKnown RBP15.61■□□□□ 0.09
PRIM1-201ENST00000338193 IRS2Q9Y4H2 1338 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms