RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 SLC27A2O14975 620 aa13.9□□□□□ -0.18
RBM39-202ENST00000338163 HSP90B1P14625 803 aaKnown RBP13.9□□□□□ -0.18
RBM39-202ENST00000338163 NMIQ13287 307 aaPredicted RBP13.9□□□□□ -0.18
RBM39-202ENST00000338163 CAMTA1Q9Y6Y1 1673 aa13.9□□□□□ -0.19
RBM39-202ENST00000338163 PPFIA3O75145 1194 aa13.89□□□□□ -0.19
RBM39-202ENST00000338163 TTC41PQ6P2S7 1318 aa13.89□□□□□ -0.19
RBM39-202ENST00000338163 GTF3C6Q969F1 213 aa13.89□□□□□ -0.19
RBM39-202ENST00000338163 FSD1Q9BTV5 496 aa13.89□□□□□ -0.19
RBM39-202ENST00000338163 MAP3K5Q99683 1374 aa13.89□□□□□ -0.19
RBM39-202ENST00000338163 RNF20Q5VTR2 975 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 IL17REQ8NFR9 667 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 BRF1Q92994 677 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 FTOQ9C0B1 505 aaKnown RBP eCLIP13.88□□□□□ -0.191e-8■□□□□ 10.4
RBM39-202ENST00000338163 CHPF2Q9P2E5 772 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 SPATA31A6Q5VVP1 1343 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 PDIA4P13667 645 aaKnown RBP13.88□□□□□ -0.19
RBM39-202ENST00000338163 RBM6P78332 1123 aaKnown RBP13.88□□□□□ -0.19
RBM39-202ENST00000338163 EVI5LQ96CN4 794 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 CCDC8Q9H0W5 538 aaPredicted RBP13.88□□□□□ -0.19
RBM39-202ENST00000338163 C9orf78Q9NZ63 289 aaPredicted RBP13.88□□□□□ -0.19
RBM39-202ENST00000338163 WDR17Q8IZU2 1322 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 GORABQ5T7V8 394 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 DNAAF4Q8WXU2 420 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 ERO1AQ96HE7 468 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 BOLA2Q9H3K6 86 aa13.88□□□□□ -0.19
RBM39-202ENST00000338163 ABCA3Q99758 1704 aa13.87□□□□□ -0.19
RBM39-202ENST00000338163 COL22A1Q8NFW1 1626 aaPredicted RBP13.87□□□□□ -0.19
RBM39-202ENST00000338163 A0A0D9SFI3 127 aa13.87□□□□□ -0.19
RBM39-202ENST00000338163 SLU7O95391 586 aaKnown RBP13.87□□□□□ -0.19
RBM39-202ENST00000338163 ANKRD1Q15327 319 aa13.87□□□□□ -0.19
RBM39-202ENST00000338163 ERCC6LQ2NKX8 1250 aa13.87□□□□□ -0.19
RBM39-202ENST00000338163 FBXO41Q8TF61 875 aa13.87□□□□□ -0.19
RBM39-202ENST00000338163 CCDC9Q9Y3X0 531 aaKnown RBP13.87□□□□□ -0.19
RBM39-202ENST00000338163 HTATSF1O43719 755 aaKnown RBP13.87□□□□□ -0.19
RBM39-202ENST00000338163 RBM43Q6ZSC3 357 aaKnown RBP13.87□□□□□ -0.19
RBM39-202ENST00000338163 TIGD1Q96MW7 591 aa13.87□□□□□ -0.19
RBM39-202ENST00000338163 SIL1Q9H173 461 aa13.87□□□□□ -0.19
RBM39-202ENST00000338163 NAP1L2Q9ULW6 460 aaPredicted RBP13.87□□□□□ -0.19
RBM39-202ENST00000338163 RPS6KB1P23443 525 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 TOB2Q14106 344 aaPredicted RBP13.86□□□□□ -0.19
RBM39-202ENST00000338163 IQCB1Q15051 598 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 STX1AQ16623 288 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 NYAP1Q6ZVC0 841 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 MAP4K1Q92918 833 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 LRRC2Q9BYS8 371 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 COL5A2P05997 1499 aaPredicted RBP13.86□□□□□ -0.19
RBM39-202ENST00000338163 NEMFO60524 1076 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 IRX5P78411 483 aaPredicted RBP13.86□□□□□ -0.19
RBM39-202ENST00000338163 CCDC73Q6ZRK6 1079 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 CCAR1Q8IX12 1150 aaKnown RBP13.86□□□□□ -0.19
RBM39-202ENST00000338163 CCAR2Q8N163 923 aaKnown RBP13.86□□□□□ -0.19
RBM39-202ENST00000338163 AOPEPQ8N6M6 819 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 RAPGEF4Q8WZA2 1011 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 MRFAP1L1Q96HT8 127 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 FMNL2Q96PY5 1086 aa13.86□□□□□ -0.19
RBM39-202ENST00000338163 RGPD5Q99666 1765 aa13.85□□□□□ -0.19
RBM39-202ENST00000338163 KINO60870 393 aaKnown RBP13.85□□□□□ -0.19
RBM39-202ENST00000338163 CDC25BP30305 580 aa13.85□□□□□ -0.19
RBM39-202ENST00000338163 SNW1Q13573 536 aaKnown RBP13.85□□□□□ -0.19
RBM39-202ENST00000338163 KDRP35968 1356 aa13.85□□□□□ -0.19
RBM39-202ENST00000338163 CCZ1BP86790 482 aa13.85□□□□□ -0.19
RBM39-202ENST00000338163 CCZ1P86791 482 aaPredicted RBP13.85□□□□□ -0.19
RBM39-202ENST00000338163 BEND3Q5T5X7 828 aa13.85□□□□□ -0.19
RBM39-202ENST00000338163 SYT10Q6XYQ8 523 aa13.85□□□□□ -0.19
RBM39-202ENST00000338163 NOL10Q9BSC4 688 aaKnown RBP13.85□□□□□ -0.19
RBM39-202ENST00000338163 ZNF446Q9NWS9 450 aa13.85□□□□□ -0.19
RBM39-202ENST00000338163 CFAP45Q9UL16 551 aa13.85□□□□□ -0.19
RBM39-202ENST00000338163 COL18A1P39060 1754 aa13.84□□□□□ -0.19
RBM39-202ENST00000338163 PDE4CQ08493 712 aa13.84□□□□□ -0.19
RBM39-202ENST00000338163 LRP6O75581 1613 aa13.84□□□□□ -0.19
RBM39-202ENST00000338163 SMC2O95347 1197 aa13.84□□□□□ -0.19
RBM39-202ENST00000338163 CAVIN2O95810 425 aa13.84□□□□□ -0.19
RBM39-202ENST00000338163 ZRSR1Q15695 479 aaKnown RBP13.84□□□□□ -0.19
RBM39-202ENST00000338163 ZNF589Q86UQ0 364 aaPredicted RBP13.84□□□□□ -0.19
RBM39-202ENST00000338163 HOMER1Q86YM7 354 aa13.84□□□□□ -0.19
RBM39-202ENST00000338163 LRRN4CLQ8ND94 238 aa13.84□□□□□ -0.19
RBM39-202ENST00000338163 TLR7Q9NYK1 1049 aaKnown RBP13.84□□□□□ -0.19
RBM39-202ENST00000338163 ME1P48163 572 aa13.83□□□□□ -0.19
RBM39-202ENST00000338163 EDC3Q96F86 508 aaKnown RBP13.83□□□□□ -0.19
RBM39-202ENST00000338163 GUCY1B3Q02153 619 aa13.83□□□□□ -0.2
RBM39-202ENST00000338163 RESTQ13127 1097 aa13.83□□□□□ -0.2
RBM39-202ENST00000338163 CWF19L2Q2TBE0 894 aaKnown RBP13.83□□□□□ -0.2
RBM39-202ENST00000338163 SARM1Q6SZW1 724 aa13.83□□□□□ -0.2
RBM39-202ENST00000338163 CEP57L1Q8IYX8 460 aa13.83□□□□□ -0.2
RBM39-202ENST00000338163 KCNB2Q92953 911 aa13.83□□□□□ -0.2
RBM39-202ENST00000338163 CARD10Q9BWT7 1032 aa13.83□□□□□ -0.2
RBM39-202ENST00000338163 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.83□□□□□ -0.2
RBM39-202ENST00000338163 POLR3GO15318 223 aaPredicted RBP13.83□□□□□ -0.2
RBM39-202ENST00000338163 SDF4Q9BRK5 362 aa13.83□□□□□ -0.2
RBM39-202ENST00000338163 GOLPH3LQ9H4A5 285 aa13.83□□□□□ -0.2
RBM39-202ENST00000338163 USP42Q9H9J4 1324 aaKnown RBP13.82□□□□□ -0.2
RBM39-202ENST00000338163 TATP17735 454 aaPredicted RBP13.82□□□□□ -0.2
RBM39-202ENST00000338163 ARHGAP29Q52LW3 1261 aa13.82□□□□□ -0.2
RBM39-202ENST00000338163 EAF2Q96CJ1 260 aaPredicted RBP13.82□□□□□ -0.2
RBM39-202ENST00000338163 ANO10Q9NW15 660 aa13.82□□□□□ -0.2
RBM39-202ENST00000338163 USP21Q9UK80 565 aa13.82□□□□□ -0.2
RBM39-202ENST00000338163 HIP1O00291 1037 aa13.82□□□□□ -0.2
RBM39-202ENST00000338163 BMS1Q14692 1282 aaKnown RBP13.82□□□□□ -0.2
RBM39-202ENST00000338163 Q6ZUG5 572 aa13.82□□□□□ -0.2
RBM39-202ENST00000338163 DHX40Q8IX18 779 aaKnown RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms