RNA–Protein interactions for RNA: ENST00000338145.7

UBE2D3-202, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-202ENST00000338145 BRCA1P38398 1863 aaKnown RBP12.85□□□□□ -0.35
UBE2D3-202ENST00000338145 KDRP35968 1356 aa12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 TNRC6CQ9HCJ0 1690 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 ERVV-2B6SEH9 535 aa12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 HSP90AB1P08238 724 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 HSPA1AP0DMV8 641 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 HSPA1BP0DMV9 641 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 VEGFAP15692 232 aaPredicted RBP12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 BANK1Q8NDB2 785 aa12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 NUDT12Q9BQG2 462 aa12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 FCF1Q9Y324 198 aaKnown RBP12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 WASHC2AQ641Q2 1341 aa12.84□□□□□ -0.35
UBE2D3-202ENST00000338145 ZNF831Q5JPB2 1677 aa12.83□□□□□ -0.35
UBE2D3-202ENST00000338145 CCNYL3P0C7X3 344 aa12.83□□□□□ -0.36
UBE2D3-202ENST00000338145 CDCA8Q53HL2 280 aa12.83□□□□□ -0.36
UBE2D3-202ENST00000338145 PPM1GO15355 546 aaPredicted RBP12.82□□□□□ -0.36
UBE2D3-202ENST00000338145 EMILIN1Q9Y6C2 1016 aa12.82□□□□□ -0.36
UBE2D3-202ENST00000338145 GLTPD2A6NH11 291 aa12.81□□□□□ -0.36
UBE2D3-202ENST00000338145 SLC4A9Q96Q91 983 aa12.81□□□□□ -0.36
UBE2D3-202ENST00000338145 EVA1BQ9NVM1 165 aa12.81□□□□□ -0.36
UBE2D3-202ENST00000338145 PPEF1O14829 653 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-202ENST00000338145 AP1G2O75843 785 aa12.79□□□□□ -0.36
UBE2D3-202ENST00000338145 LMNB1P20700 586 aa12.79□□□□□ -0.36
UBE2D3-202ENST00000338145 RPIAP49247 311 aa12.79□□□□□ -0.36
UBE2D3-202ENST00000338145 TSC1Q92574 1164 aa12.79□□□□□ -0.36
UBE2D3-202ENST00000338145 V9GY48 417 aaPredicted RBP12.79□□□□□ -0.36
UBE2D3-202ENST00000338145 USP42Q9H9J4 1324 aaKnown RBP12.79□□□□□ -0.36
UBE2D3-202ENST00000338145 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
UBE2D3-202ENST00000338145 F12P00748 615 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-202ENST00000338145 CABP4P57796 275 aa12.78□□□□□ -0.36
UBE2D3-202ENST00000338145 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
UBE2D3-202ENST00000338145 COL5A3P25940 1745 aaPredicted RBP12.77□□□□□ -0.36
UBE2D3-202ENST00000338145 SBF1O95248 1867 aa12.77□□□□□ -0.37
UBE2D3-202ENST00000338145 USP17L8P0C7I0 530 aa12.77□□□□□ -0.37
UBE2D3-202ENST00000338145 TM4SF1P30408 202 aa12.77□□□□□ -0.37
UBE2D3-202ENST00000338145 CHRNA5P30532 468 aa12.77□□□□□ -0.37
UBE2D3-202ENST00000338145 CRKLP46109 303 aaKnown RBP12.77□□□□□ -0.37
UBE2D3-202ENST00000338145 CTDSPL2Q05D32 466 aa12.77□□□□□ -0.37
UBE2D3-202ENST00000338145 DDR1Q08345 913 aa12.77□□□□□ -0.37
UBE2D3-202ENST00000338145 KCNH2Q12809 1159 aa12.77□□□□□ -0.37
UBE2D3-202ENST00000338145 POLRMTO00411 1230 aaKnown RBP12.76□□□□□ -0.37
UBE2D3-202ENST00000338145 AMOTQ4VCS5 1084 aa12.76□□□□□ -0.37
UBE2D3-202ENST00000338145 PLEKHO1Q53GL0 409 aaPredicted RBP12.76□□□□□ -0.37
UBE2D3-202ENST00000338145 PER1O15534 1290 aaPredicted RBP12.75□□□□□ -0.37
UBE2D3-202ENST00000338145 PLA2G2CQ5R387 149 aa12.75□□□□□ -0.37
UBE2D3-202ENST00000338145 CARD14Q9BXL6 1004 aa12.75□□□□□ -0.37
UBE2D3-202ENST00000338145 SRP68Q9UHB9 627 aaKnown RBP12.75□□□□□ -0.37
UBE2D3-202ENST00000338145 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
UBE2D3-202ENST00000338145 ZBTB24O43167 697 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-202ENST00000338145 PTCD1O75127 700 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-202ENST00000338145 RASSF7Q02833 373 aa12.74□□□□□ -0.37
UBE2D3-202ENST00000338145 CCDC24Q8N4L8 307 aa12.74□□□□□ -0.37
UBE2D3-202ENST00000338145 TTLL6Q8N841 843 aa12.74□□□□□ -0.37
UBE2D3-202ENST00000338145 PRDM10Q9NQV6 1147 aa12.74□□□□□ -0.37
UBE2D3-202ENST00000338145 POLKQ9UBT6 870 aa12.74□□□□□ -0.37
UBE2D3-202ENST00000338145 MYH14Q7Z406 1995 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-202ENST00000338145 APBB1O00213 710 aa12.73□□□□□ -0.37
UBE2D3-202ENST00000338145 SLC19A1P41440 591 aa12.73□□□□□ -0.37
UBE2D3-202ENST00000338145 MTHFSP49914 203 aa12.73□□□□□ -0.37
UBE2D3-202ENST00000338145 EIF4A2Q14240 407 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-202ENST00000338145 C1orf141Q5JVX7 400 aa12.72□□□□□ -0.37
UBE2D3-202ENST00000338145 ZNF530Q6P9A1 599 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-202ENST00000338145 ARMC2Q8NEN0 867 aa12.72□□□□□ -0.37
UBE2D3-202ENST00000338145 POTECB2RU33 542 aa12.71□□□□□ -0.37
UBE2D3-202ENST00000338145 H0YIN7 160 aa12.71□□□□□ -0.37
UBE2D3-202ENST00000338145 USPL1Q5W0Q7 1092 aa12.71□□□□□ -0.37
UBE2D3-202ENST00000338145 INTS5Q6P9B9 1019 aaKnown RBP12.71□□□□□ -0.37
UBE2D3-202ENST00000338145 NFATC2IPQ8NCF5 419 aa12.71□□□□□ -0.37
UBE2D3-202ENST00000338145 PRKD2Q9BZL6 878 aa12.71□□□□□ -0.37
UBE2D3-202ENST00000338145 PDZRN3Q9UPQ7 1066 aa12.71□□□□□ -0.37
UBE2D3-202ENST00000338145 CD2BP2O95400 341 aaKnown RBP12.7□□□□□ -0.38
UBE2D3-202ENST00000338145 LIAT1Q6ZQX7 453 aa12.7□□□□□ -0.38
UBE2D3-202ENST00000338145 EMID1Q96A84 441 aaPredicted RBP12.7□□□□□ -0.38
UBE2D3-202ENST00000338145 AIDAQ96BJ3 306 aa12.7□□□□□ -0.38
UBE2D3-202ENST00000338145 UNC93B1Q9H1C4 597 aa12.7□□□□□ -0.38
UBE2D3-202ENST00000338145 NARFQ9UHQ1 456 aa12.7□□□□□ -0.38
UBE2D3-202ENST00000338145 SERPINB2P05120 415 aa12.69□□□□□ -0.38
UBE2D3-202ENST00000338145 CTHP32929 405 aa12.69□□□□□ -0.38
UBE2D3-202ENST00000338145 CTCFP49711 727 aaPredicted RBP12.69□□□□□ -0.38
UBE2D3-202ENST00000338145 NFIXQ14938 502 aa12.69□□□□□ -0.38
UBE2D3-202ENST00000338145 C2CD5Q86YS7 1000 aa12.69□□□□□ -0.38
UBE2D3-202ENST00000338145 PNMA1Q8ND90 353 aa12.69□□□□□ -0.38
UBE2D3-202ENST00000338145 LRRN4Q8WUT4 740 aa12.69□□□□□ -0.38
UBE2D3-202ENST00000338145 MKRN1Q9UHC7 482 aaKnown RBP12.69□□□□□ -0.38
UBE2D3-202ENST00000338145 SOS1Q07889 1333 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 NFKBIEO00221 500 aa12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 FOXN1O15353 648 aa12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 TRIM32Q13049 653 aa12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 ERFEQ4G0M1 354 aa12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 SPRYD7Q5W111 196 aa12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 PTCRAQ6ISU1 281 aaPredicted RBP12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 GPKOWQ92917 476 aaPredicted RBP eCLIP12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 MAP10Q9P2G4 905 aa12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 CNTNAP1P78357 1384 aa12.68□□□□□ -0.38
UBE2D3-202ENST00000338145 WNT7BP56706 349 aa12.67□□□□□ -0.38
UBE2D3-202ENST00000338145 FLIIQ13045 1269 aa12.67□□□□□ -0.38
UBE2D3-202ENST00000338145 TIAM2Q8IVF5 1701 aa12.66□□□□□ -0.38
UBE2D3-202ENST00000338145 NRXN2Q9P2S2 1712 aa12.66□□□□□ -0.38
UBE2D3-202ENST00000338145 IQCA1LA6NCM1 817 aa12.66□□□□□ -0.38
UBE2D3-202ENST00000338145 CYP19A1P11511 503 aaPredicted RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms