RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 ITGA6P23229 1130 aa27.64■■■□□ 2.01
CLPTM1-201ENST00000337392 MCMDC2Q4G0Z9 681 aa27.64■■■□□ 2.01
CLPTM1-201ENST00000337392 DZIP3Q86Y13 1208 aaKnown RBP27.64■■■□□ 2.01
CLPTM1-201ENST00000337392 MARCH10Q8NA82 808 aaPredicted RBP27.64■■■□□ 2.01
CLPTM1-201ENST00000337392 IFIT5Q13325 482 aaKnown RBP27.63■■■□□ 2.01
CLPTM1-201ENST00000337392 DDB1Q16531 1140 aa27.63■■■□□ 2.01
CLPTM1-201ENST00000337392 GORABQ5T7V8 394 aa27.63■■■□□ 2.01
CLPTM1-201ENST00000337392 STOX1Q6ZVD7 989 aa27.63■■■□□ 2.01
CLPTM1-201ENST00000337392 STX6O43752 255 aa27.63■■■□□ 2.01
CLPTM1-201ENST00000337392 FAM173BQ6P4H8 233 aa27.63■■■□□ 2.01
CLPTM1-201ENST00000337392 SYCE3A1L190 88 aa27.62■■■□□ 2.01
CLPTM1-201ENST00000337392 CHST3Q7LGC8 479 aa27.62■■■□□ 2.01
CLPTM1-201ENST00000337392 USP48Q86UV5 1035 aa27.62■■■□□ 2.01
CLPTM1-201ENST00000337392 FERMT3Q86UX7 667 aa27.62■■■□□ 2.01
CLPTM1-201ENST00000337392 TTLL11Q8NHH1 800 aa27.62■■■□□ 2.01
CLPTM1-201ENST00000337392 TEX13AQ9BXU3 409 aaPredicted RBP27.62■■■□□ 2.01
CLPTM1-201ENST00000337392 TM6SF1Q9BZW5 370 aa27.62■■■□□ 2.01
CLPTM1-201ENST00000337392 VPS37CA5D8V6 355 aaPredicted RBP27.62■■■□□ 2.01
CLPTM1-201ENST00000337392 TTLL5Q6EMB2 1281 aa27.62■■■□□ 2.01
CLPTM1-201ENST00000337392 IRS4O14654 1257 aaPredicted RBP27.61■■■□□ 2.01
CLPTM1-201ENST00000337392 HCLS1P14317 486 aaPredicted RBP27.61■■■□□ 2.01
CLPTM1-201ENST00000337392 RPS6KB1P23443 525 aa27.61■■■□□ 2.01
CLPTM1-201ENST00000337392 COL14A1Q05707 1796 aaKnown RBP27.61■■■□□ 2.01
CLPTM1-201ENST00000337392 M0R2C6 588 aa27.6■■■□□ 2.01
CLPTM1-201ENST00000337392 LDHAL6AQ6ZMR3 332 aa27.6■■■□□ 2.01
CLPTM1-201ENST00000337392 WDR33Q9C0J8 1336 aaKnown RBP27.6■■■□□ 2.01
CLPTM1-201ENST00000337392 SPATA31A1Q5TZJ5 1347 aa27.59■■■□□ 2.01
CLPTM1-201ENST00000337392 ATP6V1AP38606 617 aa27.59■■■□□ 2.01
CLPTM1-201ENST00000337392 RNF20Q5VTR2 975 aa27.59■■■□□ 2.01
CLPTM1-201ENST00000337392 ZSCAN21Q9Y5A6 473 aaPredicted RBP27.59■■■□□ 2.01
CLPTM1-201ENST00000337392 FIBPO43427 364 aa27.59■■■□□ 2.01
CLPTM1-201ENST00000337392 ZSCAN22P10073 491 aaPredicted RBP27.59■■■□□ 2.01
CLPTM1-201ENST00000337392 PTMSP20962 102 aa27.59■■■□□ 2.01
CLPTM1-201ENST00000337392 ZAP70P43403 619 aa27.59■■■□□ 2.01
CLPTM1-201ENST00000337392 PTF1AQ7RTS3 328 aa27.59■■■□□ 2.01
CLPTM1-201ENST00000337392 METTL24Q5JXM2 366 aa27.58■■■□□ 2.01
CLPTM1-201ENST00000337392 TTC39AQ5SRH9 613 aa27.58■■■□□ 2.01
CLPTM1-201ENST00000337392 OSBP2Q969R2 916 aa27.58■■■□□ 2.01
CLPTM1-201ENST00000337392 MAST3O60307 1309 aa27.58■■■□□ 2.01
CLPTM1-201ENST00000337392 CSF1RP07333 972 aa27.58■■■□□ 2.01
CLPTM1-201ENST00000337392 TRIM28Q13263 835 aaKnown RBP27.58■■■□□ 2.01
CLPTM1-201ENST00000337392 ITPK1Q13572 414 aa27.58■■■□□ 2.01
CLPTM1-201ENST00000337392 DOT1LQ8TEK3 1739 aa27.57■■■□□ 2
CLPTM1-201ENST00000337392 JAK2O60674 1132 aa27.57■■■□□ 2
CLPTM1-201ENST00000337392 JCADQ9P266 1359 aa27.57■■■□□ 2
CLPTM1-201ENST00000337392 SLIT2O94813 1529 aa27.57■■■□□ 2
CLPTM1-201ENST00000337392 CIAO1O76071 339 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 PSMA5P28066 241 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 CTSWP56202 376 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 USPL1Q5W0Q7 1092 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 RRAGDQ9NQL2 400 aaPredicted RBP27.56■■■□□ 2
CLPTM1-201ENST00000337392 CNNM1Q9NRU3 951 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 HAND2P61296 217 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 DNM1Q05193 864 aaKnown RBP27.56■■■□□ 2
CLPTM1-201ENST00000337392 FAM182BQ5T319 152 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 Q6ZUG5 572 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 NEK1Q96PY6 1258 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 MTMR6Q9Y217 621 aa27.56■■■□□ 2
CLPTM1-201ENST00000337392 CRKLP46109 303 aaKnown RBP27.55■■■□□ 2
CLPTM1-201ENST00000337392 FOSBP53539 338 aa27.55■■■□□ 2
CLPTM1-201ENST00000337392 INTS5Q6P9B9 1019 aaKnown RBP27.55■■■□□ 2
CLPTM1-201ENST00000337392 RBSNQ9H1K0 784 aa27.55■■■□□ 2
CLPTM1-201ENST00000337392 F13A1P00488 732 aa27.55■■■□□ 2
CLPTM1-201ENST00000337392 WASHC4Q2M389 1173 aa27.55■■■□□ 2
CLPTM1-201ENST00000337392 CDC37L1Q7L3B6 337 aa27.55■■■□□ 2
CLPTM1-201ENST00000337392 HSPD1P10809 573 aaKnown RBP27.54■■■□□ 2
CLPTM1-201ENST00000337392 GPR108Q9NPR9 543 aa27.54■■■□□ 2
CLPTM1-201ENST00000337392 RIPOR2Q9Y4F9 1068 aa27.54■■■□□ 2
CLPTM1-201ENST00000337392 RIC1Q4ADV7 1423 aa27.54■■■□□ 2
CLPTM1-201ENST00000337392 SUSD4Q5VX71 490 aa27.54■■■□□ 2
CLPTM1-201ENST00000337392 SEC31BQ9NQW1 1179 aa27.54■■■□□ 2
CLPTM1-201ENST00000337392 FAM98CQ17RN3 349 aaKnown RBP27.54■■■□□ 2
CLPTM1-201ENST00000337392 ZMYM1Q5SVZ6 1142 aa27.54■■■□□ 2
CLPTM1-201ENST00000337392 BRF1Q92994 677 aa27.54■■■□□ 2
CLPTM1-201ENST00000337392 LRP6O75581 1613 aa27.53■■■□□ 2
CLPTM1-201ENST00000337392 ATP2B3Q16720 1220 aa27.53■■■□□ 2
CLPTM1-201ENST00000337392 CCDC158Q5M9N0 1113 aa27.53■■■□□ 2
CLPTM1-201ENST00000337392 RNF214Q8ND24 703 aa27.53■■■□□ 2
CLPTM1-201ENST00000337392 DDX11Q96FC9 970 aa27.53■■■□□ 2
CLPTM1-201ENST00000337392 MCAMP43121 646 aa27.53■■■□□ 2
CLPTM1-201ENST00000337392 PUS7LQ9H0K6 701 aaKnown RBP27.53■■■□□ 2
CLPTM1-201ENST00000337392 GPHNQ9NQX3 736 aaPredicted RBP27.53■■■□□ 2
CLPTM1-201ENST00000337392 LOC102724428A0A0B4J2F2 783 aa27.52■■■□□ 2
CLPTM1-201ENST00000337392 HSP90B1P14625 803 aaKnown RBP27.52■■■□□ 2
CLPTM1-201ENST00000337392 SIK1P57059 783 aa27.52■■■□□ 2
CLPTM1-201ENST00000337392 NUP98P52948 1817 aa27.52■■■□□ 2
CLPTM1-201ENST00000337392 RNF113AO15541 343 aaKnown RBP27.52■■■□□ 2
CLPTM1-201ENST00000337392 NASPP49321 788 aaPredicted RBP27.52■■■□□ 2
CLPTM1-201ENST00000337392 SH2B1Q9NRF2 756 aaPredicted RBP27.52■■■□□ 2
CLPTM1-201ENST00000337392 SH3TC1Q8TE82 1336 aa27.52■■■□□ 2
CLPTM1-201ENST00000337392 PALLDQ8WX93 1383 aa27.51■■■□□ 2
CLPTM1-201ENST00000337392 PLCH1Q4KWH8 1693 aa27.51■■□□□ 1.99
CLPTM1-201ENST00000337392 FOXP2O15409 715 aa27.51■■□□□ 1.99
CLPTM1-201ENST00000337392 LARP1BQ659C4 914 aaKnown RBP27.51■■□□□ 1.99
CLPTM1-201ENST00000337392 NAP1L2Q9ULW6 460 aaPredicted RBP27.51■■□□□ 1.99
CLPTM1-201ENST00000337392 PLA2G12BQ9BX93 195 aa27.51■■□□□ 1.99
CLPTM1-201ENST00000337392 IL6STP40189 918 aaPredicted RBP27.5■■□□□ 1.99
CLPTM1-201ENST00000337392 ZSCAN31Q96LW9 406 aaPredicted RBP27.5■■□□□ 1.99
CLPTM1-201ENST00000337392 HMG20BQ9P0W2 317 aa27.5■■□□□ 1.99
CLPTM1-201ENST00000337392 U3KPZ7 1027 aaPredicted RBP27.5■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms