RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 PGAP2Q9UHJ9 254 aa22.66■■□□□ 1.22
CMTM1-204ENST00000336328 RASSF10A6NK89 507 aa22.65■■□□□ 1.22
CMTM1-204ENST00000336328 H7C1W4 665 aa22.65■■□□□ 1.22
CMTM1-204ENST00000336328 ECE2O60344 883 aa22.65■■□□□ 1.22
CMTM1-204ENST00000336328 EXOSC9Q06265 439 aaKnown RBP22.65■■□□□ 1.22
CMTM1-204ENST00000336328 TTLL11Q8NHH1 800 aa22.65■■□□□ 1.22
CMTM1-204ENST00000336328 DNAAF4Q8WXU2 420 aa22.65■■□□□ 1.22
CMTM1-204ENST00000336328 CCDC85AQ96PX6 553 aaPredicted RBP22.65■■□□□ 1.22
CMTM1-204ENST00000336328 ABT1Q9ULW3 272 aaKnown RBP22.65■■□□□ 1.22
CMTM1-204ENST00000336328 LTBP1Q14766 1721 aa22.65■■□□□ 1.22
CMTM1-204ENST00000336328 XDHP47989 1333 aa22.64■■□□□ 1.22
CMTM1-204ENST00000336328 PSMD14O00487 310 aa22.64■■□□□ 1.21
CMTM1-204ENST00000336328 UFL1O94874 794 aa22.64■■□□□ 1.21
CMTM1-204ENST00000336328 ATP2B4P23634 1241 aa22.64■■□□□ 1.21
CMTM1-204ENST00000336328 CWF19L2Q2TBE0 894 aaKnown RBP22.64■■□□□ 1.21
CMTM1-204ENST00000336328 LINS1Q8NG48 757 aa22.64■■□□□ 1.21
CMTM1-204ENST00000336328 VEGFBP49765 207 aa22.63■■□□□ 1.21
CMTM1-204ENST00000336328 GCKRQ14397 625 aa22.63■■□□□ 1.21
CMTM1-204ENST00000336328 DOK7Q18PE1 504 aa22.63■■□□□ 1.21
CMTM1-204ENST00000336328 BSDC1Q9NW68 430 aaPredicted RBP22.63■■□□□ 1.21
CMTM1-204ENST00000336328 DUOX1Q9NRD9 1551 aa22.63■■□□□ 1.21
CMTM1-204ENST00000336328 CDC37L1Q7L3B6 337 aa22.62■■□□□ 1.21
CMTM1-204ENST00000336328 UBE3BQ7Z3V4 1068 aa22.62■■□□□ 1.21
CMTM1-204ENST00000336328 MICALL2Q8IY33 904 aa22.62■■□□□ 1.21
CMTM1-204ENST00000336328 AIDAQ96BJ3 306 aa22.62■■□□□ 1.21
CMTM1-204ENST00000336328 PLA2G12BQ9BX93 195 aa22.61■■□□□ 1.21
CMTM1-204ENST00000336328 ZBTB12Q9Y330 459 aaPredicted RBP22.61■■□□□ 1.21
CMTM1-204ENST00000336328 RTL9Q8NET4 1388 aa22.61■■□□□ 1.21
CMTM1-204ENST00000336328 IGHMBP2P38935 993 aaKnown RBP22.6■■□□□ 1.21
CMTM1-204ENST00000336328 ECE1P42892 770 aa22.6■■□□□ 1.21
CMTM1-204ENST00000336328 VIL1P09327 827 aaKnown RBP22.59■■□□□ 1.21
CMTM1-204ENST00000336328 COL13A1Q5TAT6 717 aaPredicted RBP22.59■■□□□ 1.21
CMTM1-204ENST00000336328 PODNQ7Z5L7 613 aa22.59■■□□□ 1.21
CMTM1-204ENST00000336328 GREM2Q9H772 168 aa22.59■■□□□ 1.21
CMTM1-204ENST00000336328 MYH3P11055 1940 aa22.59■■□□□ 1.21
CMTM1-204ENST00000336328 TRPM7Q96QT4 1865 aa22.58■■□□□ 1.21
CMTM1-204ENST00000336328 HIRAP54198 1017 aaPredicted RBP22.58■■□□□ 1.21
CMTM1-204ENST00000336328 MAP2K1Q02750 393 aaPredicted RBP22.58■■□□□ 1.21
CMTM1-204ENST00000336328 MINPP1Q9UNW1 487 aa22.58■■□□□ 1.21
CMTM1-204ENST00000336328 WDR33Q9C0J8 1336 aaKnown RBP22.57■■□□□ 1.2
CMTM1-204ENST00000336328 TRAF5O00463 557 aa22.57■■□□□ 1.2
CMTM1-204ENST00000336328 CST9Q5W186 159 aa22.57■■□□□ 1.2
CMTM1-204ENST00000336328 AGBL3Q8NEM8 1001 aa22.57■■□□□ 1.2
CMTM1-204ENST00000336328 GPR101Q96P66 508 aaPredicted RBP22.57■■□□□ 1.2
CMTM1-204ENST00000336328 MPHOSPH8Q99549 860 aa22.57■■□□□ 1.2
CMTM1-204ENST00000336328 ANKRD2Q9GZV1 360 aa22.57■■□□□ 1.2
CMTM1-204ENST00000336328 CELF2O95319 508 aaKnown RBP22.56■■□□□ 1.2
CMTM1-204ENST00000336328 CSF1RP07333 972 aa22.56■■□□□ 1.2
CMTM1-204ENST00000336328 PAXIP1Q6ZW49 1069 aaPredicted RBP22.56■■□□□ 1.2
CMTM1-204ENST00000336328 SAMD7Q7Z3H4 446 aa22.56■■□□□ 1.2
CMTM1-204ENST00000336328 TRPM4Q8TD43 1214 aa22.56■■□□□ 1.2
CMTM1-204ENST00000336328 GLIS2Q9BZE0 524 aaPredicted RBP22.56■■□□□ 1.2
CMTM1-204ENST00000336328 KCNQ5Q9NR82 932 aa22.56■■□□□ 1.2
CMTM1-204ENST00000336328 LEMD3Q9Y2U8 911 aa22.56■■□□□ 1.2
CMTM1-204ENST00000336328 TLL2Q9Y6L7 1015 aa22.56■■□□□ 1.2
CMTM1-204ENST00000336328 PCNTO95613 3336 aa22.56■■□□□ 1.2
CMTM1-204ENST00000336328 CCT4P50991 539 aaKnown RBP22.55■■□□□ 1.2
CMTM1-204ENST00000336328 TNS4Q8IZW8 715 aa22.55■■□□□ 1.2
CMTM1-204ENST00000336328 DCPSQ96C86 337 aaKnown RBP22.55■■□□□ 1.2
CMTM1-204ENST00000336328 WBP1LQ9NX94 342 aa22.55■■□□□ 1.2
CMTM1-204ENST00000336328 ITGA6P23229 1130 aa22.54■■□□□ 1.2
CMTM1-204ENST00000336328 CTCFP49711 727 aaPredicted RBP22.54■■□□□ 1.2
CMTM1-204ENST00000336328 FMR1Q06787 632 aaKnown RBP eCLIP22.54■■□□□ 1.2
CMTM1-204ENST00000336328 TBC1D10BQ4KMP7 808 aaPredicted RBP22.54■■□□□ 1.2
CMTM1-204ENST00000336328 RBM26Q5T8P6 1007 aaKnown RBP22.54■■□□□ 1.2
CMTM1-204ENST00000336328 RSBN1LQ6PCB5 846 aaPredicted RBP22.54■■□□□ 1.2
CMTM1-204ENST00000336328 HHIPL1Q96JK4 782 aa22.54■■□□□ 1.2
CMTM1-204ENST00000336328 CAPNS2Q96L46 248 aa22.54■■□□□ 1.2
CMTM1-204ENST00000336328 SPINK5Q9NQ38 1064 aaPredicted RBP22.54■■□□□ 1.2
CMTM1-204ENST00000336328 COL4A1P02462 1669 aa22.54■■□□□ 1.2
CMTM1-204ENST00000336328 ANKRD18BA2A2Z9 1011 aa22.53■■□□□ 1.2
CMTM1-204ENST00000336328 USP17L3A6NCW0 530 aa22.53■■□□□ 1.2
CMTM1-204ENST00000336328 USP17L4A6NCW7 530 aa22.53■■□□□ 1.2
CMTM1-204ENST00000336328 CASP7P55210 303 aa22.53■■□□□ 1.2
CMTM1-204ENST00000336328 USP17L1Q7RTZ2 530 aa22.53■■□□□ 1.2
CMTM1-204ENST00000336328 USP48Q86UV5 1035 aa22.53■■□□□ 1.2
CMTM1-204ENST00000336328 BEGAINQ9BUH8 593 aa22.53■■□□□ 1.2
CMTM1-204ENST00000336328 SHTN1A0MZ66 631 aa22.52■■□□□ 1.2
CMTM1-204ENST00000336328 MMP14P50281 582 aa22.52■■□□□ 1.2
CMTM1-204ENST00000336328 BEND3Q5T5X7 828 aa22.52■■□□□ 1.2
CMTM1-204ENST00000336328 PRDM10Q9NQV6 1147 aa22.52■■□□□ 1.2
CMTM1-204ENST00000336328 MED23Q9ULK4 1368 aa22.51■■□□□ 1.19
CMTM1-204ENST00000336328 MAP2K2P36507 400 aa22.51■■□□□ 1.19
CMTM1-204ENST00000336328 KIF4BQ2VIQ3 1234 aa22.51■■□□□ 1.19
CMTM1-204ENST00000336328 KRT26Q7Z3Y9 468 aa22.51■■□□□ 1.19
CMTM1-204ENST00000336328 SAPCD2Q86UD0 394 aa22.51■■□□□ 1.19
CMTM1-204ENST00000336328 COA1Q9GZY4 146 aa22.51■■□□□ 1.19
CMTM1-204ENST00000336328 F6X3S4 739 aa22.5■■□□□ 1.19
CMTM1-204ENST00000336328 FOXN1O15353 648 aa22.5■■□□□ 1.19
CMTM1-204ENST00000336328 USP17L8P0C7I0 530 aa22.5■■□□□ 1.19
CMTM1-204ENST00000336328 IFIT5Q13325 482 aaKnown RBP22.5■■□□□ 1.19
CMTM1-204ENST00000336328 ZNF408Q9H9D4 720 aa22.5■■□□□ 1.19
CMTM1-204ENST00000336328 C9orf78Q9NZ63 289 aaPredicted RBP22.5■■□□□ 1.19
CMTM1-204ENST00000336328 ALDH1L1O75891 902 aa22.49■■□□□ 1.19
CMTM1-204ENST00000336328 KCNJ4P48050 445 aa22.49■■□□□ 1.19
CMTM1-204ENST00000336328 ZNF280AP59817 542 aaPredicted RBP22.49■■□□□ 1.19
CMTM1-204ENST00000336328 FAM161AQ3B820 660 aa22.49■■□□□ 1.19
CMTM1-204ENST00000336328 SULF1Q8IWU6 871 aa22.49■■□□□ 1.19
CMTM1-204ENST00000336328 ZNF804BA4D1E1 1349 aa22.49■■□□□ 1.19
CMTM1-204ENST00000336328 POLR2AP24928 1970 aaKnown RBP22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms