RNA–Protein interactions for RNA: ENST00000335790.7

LMO1-201, Transcript of LIM domain only 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LMO1, Length 1,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-201ENST00000335790 ZNF512BQ96KM6 892 aaPredicted RBP16.3■□□□□ 0.2
LMO1-201ENST00000335790 FSD1Q9BTV5 496 aa16.3■□□□□ 0.2
LMO1-201ENST00000335790 BCL11BQ9C0K0 894 aaPredicted RBP16.3■□□□□ 0.2
LMO1-201ENST00000335790 NARFQ9UHQ1 456 aa16.3■□□□□ 0.2
LMO1-201ENST00000335790 NIP7Q9Y221 180 aaKnown RBP eCLIP16.3■□□□□ 0.2
LMO1-201ENST00000335790 A0A1B0GUL6 1792 aa16.3■□□□□ 0.2
LMO1-201ENST00000335790 LDHAL6AQ6ZMR3 332 aa16.29■□□□□ 0.2
LMO1-201ENST00000335790 MAP4K1Q92918 833 aa16.29■□□□□ 0.2
LMO1-201ENST00000335790 SLKQ9H2G2 1235 aaPredicted RBP16.29■□□□□ 0.2
LMO1-201ENST00000335790 BCL2L12Q9HB09 334 aa16.29■□□□□ 0.2
LMO1-201ENST00000335790 MYH7P12883 1935 aa16.29■□□□□ 0.2
LMO1-201ENST00000335790 NECTIN1Q15223 517 aa16.28■□□□□ 0.2
LMO1-201ENST00000335790 EZH2Q15910 746 aaKnown RBP16.28■□□□□ 0.2
LMO1-201ENST00000335790 SLC10A5Q5PT55 438 aa16.28■□□□□ 0.2
LMO1-201ENST00000335790 FAM227BQ96M60 508 aa16.28■□□□□ 0.2
LMO1-201ENST00000335790 NEUROD6Q96NK8 337 aa16.28■□□□□ 0.2
LMO1-201ENST00000335790 CCNL1Q9UK58 526 aaPredicted RBP16.28■□□□□ 0.2
LMO1-201ENST00000335790 SNX14Q9Y5W7 946 aa16.28■□□□□ 0.2
LMO1-201ENST00000335790 UBR3Q6ZT12 1888 aa16.28■□□□□ 0.2
LMO1-201ENST00000335790 MROH5Q6ZUA9 1318 aa16.27■□□□□ 0.2
LMO1-201ENST00000335790 A0A0D9SFI3 127 aa16.27■□□□□ 0.2
LMO1-201ENST00000335790 PTH1RQ03431 593 aa16.27■□□□□ 0.2
LMO1-201ENST00000335790 SF3B3Q15393 1217 aaKnown RBP16.27■□□□□ 0.2
LMO1-201ENST00000335790 CCDC152Q4G0S7 254 aa16.27■□□□□ 0.2
LMO1-201ENST00000335790 XAGE2Q96GT9 111 aa16.27■□□□□ 0.2
LMO1-201ENST00000335790 TM6SF1Q9BZW5 370 aa16.27■□□□□ 0.2
LMO1-201ENST00000335790 PAG1Q9NWQ8 432 aa16.27■□□□□ 0.2
LMO1-201ENST00000335790 PDE8BO95263 885 aa16.26■□□□□ 0.19
LMO1-201ENST00000335790 IFIT1P09914 478 aaKnown RBP16.26■□□□□ 0.19
LMO1-201ENST00000335790 FGFR2P21802 821 aa16.26■□□□□ 0.19
LMO1-201ENST00000335790 NEK4P51957 841 aa16.26■□□□□ 0.19
LMO1-201ENST00000335790 ATP2B3Q16720 1220 aa16.26■□□□□ 0.19
LMO1-201ENST00000335790 METTL24Q5JXM2 366 aa16.26■□□□□ 0.19
LMO1-201ENST00000335790 CCDC158Q5M9N0 1113 aa16.26■□□□□ 0.19
LMO1-201ENST00000335790 USPL1Q5W0Q7 1092 aa16.26■□□□□ 0.19
LMO1-201ENST00000335790 EDC3Q96F86 508 aaKnown RBP16.26■□□□□ 0.19
LMO1-201ENST00000335790 HCLS1P14317 486 aaPredicted RBP16.25■□□□□ 0.19
LMO1-201ENST00000335790 CUL4AQ13619 759 aa16.25■□□□□ 0.19
LMO1-201ENST00000335790 TSGA10IPQ3SY00 556 aa16.25■□□□□ 0.19
LMO1-201ENST00000335790 FAM196AQ6ZSG2 479 aa16.25■□□□□ 0.19
LMO1-201ENST00000335790 CCDC85AQ96PX6 553 aaPredicted RBP16.25■□□□□ 0.19
LMO1-201ENST00000335790 CNNM1Q9NRU3 951 aa16.25■□□□□ 0.19
LMO1-201ENST00000335790 HELLSQ9NRZ9 838 aa16.25■□□□□ 0.19
LMO1-201ENST00000335790 RTCBQ9Y3I0 505 aaKnown RBP16.25■□□□□ 0.19
LMO1-201ENST00000335790 TAF5LO75529 589 aa16.24■□□□□ 0.19
LMO1-201ENST00000335790 ADRA2BP18089 450 aa16.24■□□□□ 0.19
LMO1-201ENST00000335790 HMGB2P26583 209 aaKnown RBP16.24■□□□□ 0.19
LMO1-201ENST00000335790 ADORA1P30542 326 aa16.24■□□□□ 0.19
LMO1-201ENST00000335790 NBR1Q14596 966 aa16.24■□□□□ 0.19
LMO1-201ENST00000335790 RASEFQ8IZ41 740 aa16.24■□□□□ 0.19
LMO1-201ENST00000335790 TTC14Q96N46 770 aa16.24■□□□□ 0.19
LMO1-201ENST00000335790 DNAJC2Q99543 621 aaKnown RBP16.24■□□□□ 0.19
LMO1-201ENST00000335790 NYXQ9GZU5 481 aa16.24■□□□□ 0.19
LMO1-201ENST00000335790 CWC22Q9HCG8 908 aaKnown RBP16.24■□□□□ 0.19
LMO1-201ENST00000335790 DOCK2Q92608 1830 aa16.24■□□□□ 0.19
LMO1-201ENST00000335790 SSFA2P28290 1259 aa16.23■□□□□ 0.19
LMO1-201ENST00000335790 KCNQ4P56696 695 aa16.23■□□□□ 0.19
LMO1-201ENST00000335790 LRRFIP1Q32MZ4 808 aaKnown RBP16.23■□□□□ 0.19
LMO1-201ENST00000335790 MCMDC2Q4G0Z9 681 aa16.23■□□□□ 0.19
LMO1-201ENST00000335790 TTC39AQ5SRH9 613 aa16.23■□□□□ 0.19
LMO1-201ENST00000335790 ZMYM1Q5SVZ6 1142 aa16.23■□□□□ 0.19
LMO1-201ENST00000335790 LPIN2Q92539 896 aa16.23■□□□□ 0.19
LMO1-201ENST00000335790 HMG20BQ9P0W2 317 aa16.23■□□□□ 0.19
LMO1-201ENST00000335790 RBM8AQ9Y5S9 174 aaKnown RBP16.23■□□□□ 0.19
LMO1-201ENST00000335790 RPAP1Q9BWH6 1393 aaPredicted RBP16.23■□□□□ 0.19
LMO1-201ENST00000335790 GOLIM4O00461 696 aa16.22■□□□□ 0.19
LMO1-201ENST00000335790 GNPATO15228 680 aa16.22■□□□□ 0.19
LMO1-201ENST00000335790 ARID4AP29374 1257 aaPredicted RBP16.22■□□□□ 0.19
LMO1-201ENST00000335790 PUM3Q15397 648 aaKnown RBP16.22■□□□□ 0.19
LMO1-201ENST00000335790 SLC27A3Q5K4L6 730 aa16.22■□□□□ 0.19
LMO1-201ENST00000335790 TBC1D9BQ66K14 1250 aa16.22■□□□□ 0.19
LMO1-201ENST00000335790 DDX46Q7L014 1031 aaKnown RBP16.22■□□□□ 0.19
LMO1-201ENST00000335790 ZNF589Q86UQ0 364 aaPredicted RBP16.22■□□□□ 0.19
LMO1-201ENST00000335790 SPRYD3Q8NCJ5 442 aa16.22■□□□□ 0.19
LMO1-201ENST00000335790 INTS4Q96HW7 963 aaKnown RBP16.22■□□□□ 0.19
LMO1-201ENST00000335790 ZSWIM6Q9HCJ5 1215 aa16.22■□□□□ 0.19
LMO1-201ENST00000335790 TRIM37O94972 964 aa16.21■□□□□ 0.19
LMO1-201ENST00000335790 ZFYP08048 801 aaPredicted RBP16.21■□□□□ 0.19
LMO1-201ENST00000335790 RAB3GAP1Q15042 981 aa16.21■□□□□ 0.19
LMO1-201ENST00000335790 ERFEQ4G0M1 354 aa16.21■□□□□ 0.19
LMO1-201ENST00000335790 CREB3L3Q68CJ9 461 aa16.21■□□□□ 0.19
LMO1-201ENST00000335790 ARHGEF1Q92888 912 aaKnown RBP16.21■□□□□ 0.19
LMO1-201ENST00000335790 TMX3Q96JJ7 454 aa16.21■□□□□ 0.19
LMO1-201ENST00000335790 CDC5LQ99459 802 aaKnown RBP16.21■□□□□ 0.19
LMO1-201ENST00000335790 ALDH8A1Q9H2A2 487 aaPredicted RBP16.21■□□□□ 0.19
LMO1-201ENST00000335790 PPP1R1BQ9UD71 204 aaPredicted RBP16.21■□□□□ 0.19
LMO1-201ENST00000335790 NDUFB9Q9Y6M9 179 aa16.21■□□□□ 0.19
LMO1-201ENST00000335790 COL4A1P02462 1669 aa16.21■□□□□ 0.18
LMO1-201ENST00000335790 DCAF8L1A6NGE4 600 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 SLC27A2O14975 620 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 RNF113AO15541 343 aaKnown RBP16.2■□□□□ 0.18
LMO1-201ENST00000335790 ZPR1O75312 459 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 IGHMBP2P38935 993 aaKnown RBP16.2■□□□□ 0.18
LMO1-201ENST00000335790 GORABQ5T7V8 394 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 RNF20Q5VTR2 975 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 CLEC17AQ6ZS10 378 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 MPHOSPH8Q99549 860 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 DSCC1Q9BVC3 393 aa16.2■□□□□ 0.18
LMO1-201ENST00000335790 SEC31BQ9NQW1 1179 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms