RNA–Protein interactions for RNA: ENST00000334475.10

TREM1-202, Transcript of triggering receptor expressed on myeloid cells 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TREM1, Length 1,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREM1-202ENST00000334475 ISCA1Q9BUE6 129 aa10.8□□□□□ -0.68
TREM1-202ENST00000334475 TM6SF1Q9BZW5 370 aa10.8□□□□□ -0.68
TREM1-202ENST00000334475 QSER1Q2KHR3 1735 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 STARD3NLO95772 234 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 ATP5JP18859 108 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 HSP90AB3PQ58FF7 597 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 TNNI3KQ59H18 835 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 DCAF8Q5TAQ9 597 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 ASTLQ6HA08 431 aaPredicted RBP10.79□□□□□ -0.68
TREM1-202ENST00000334475 KIF6Q6ZMV9 814 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 TMX3Q96JJ7 454 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 PALD1Q9ULE6 856 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 FPGT-TNNI3KV9GXZ4 949 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 ZNF831Q5JPB2 1677 aa10.79□□□□□ -0.68
TREM1-202ENST00000334475 CIAO1O76071 339 aa10.78□□□□□ -0.68
TREM1-202ENST00000334475 MAP4K4O95819 1239 aaPredicted RBP10.78□□□□□ -0.68
TREM1-202ENST00000334475 IL15P40933 162 aaPredicted RBP10.78□□□□□ -0.68
TREM1-202ENST00000334475 FOXO4P98177 505 aa10.78□□□□□ -0.68
TREM1-202ENST00000334475 TCIRG1Q13488 830 aa10.78□□□□□ -0.68
TREM1-202ENST00000334475 IFFO2Q5TF58 517 aa10.78□□□□□ -0.68
TREM1-202ENST00000334475 CWC27Q6UX04 472 aaKnown RBP10.78□□□□□ -0.68
TREM1-202ENST00000334475 TTLL7Q6ZT98 887 aa10.78□□□□□ -0.68
TREM1-202ENST00000334475 PLA2G12BQ9BX93 195 aa10.78□□□□□ -0.68
TREM1-202ENST00000334475 SNX14Q9Y5W7 946 aa10.78□□□□□ -0.68
TREM1-202ENST00000334475 NUP98P52948 1817 aa10.78□□□□□ -0.68
TREM1-202ENST00000334475 CCDC171Q6TFL3 1326 aa10.78□□□□□ -0.68
TREM1-202ENST00000334475 MED23Q9ULK4 1368 aa10.77□□□□□ -0.68
TREM1-202ENST00000334475 ATP5J2-PTCD1G3V325 749 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 PTCD1O75127 700 aaKnown RBP10.77□□□□□ -0.69
TREM1-202ENST00000334475 BAG4O95429 457 aaKnown RBP10.77□□□□□ -0.69
TREM1-202ENST00000334475 A1BGP04217 495 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 SSFA2P28290 1259 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 GPR162Q16538 588 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 LMBR1LQ6UX01 489 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 SMIM5Q71RC9 77 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 AMIGO3Q86WK7 504 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 CCDC8Q9H0W5 538 aaPredicted RBP10.77□□□□□ -0.69
TREM1-202ENST00000334475 SIL1Q9H173 461 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 IL25Q9H293 177 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 CDHR2Q9BYE9 1310 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 PALLDQ8WX93 1383 aa10.77□□□□□ -0.69
TREM1-202ENST00000334475 ZNF609O15014 1411 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 LY75O60449 1722 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 LAMB2P55268 1798 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 ATMINO43313 823 aaPredicted RBP10.76□□□□□ -0.69
TREM1-202ENST00000334475 PCCAP05165 728 aaPredicted RBP10.76□□□□□ -0.69
TREM1-202ENST00000334475 PDIA4P13667 645 aaKnown RBP10.76□□□□□ -0.69
TREM1-202ENST00000334475 PIP4K2AP48426 406 aaPredicted RBP10.76□□□□□ -0.69
TREM1-202ENST00000334475 RNF20Q5VTR2 975 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 LHX8Q68G74 356 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.76□□□□□ -0.69
TREM1-202ENST00000334475 PIGBQ92521 554 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 TTC14Q96N46 770 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 FSD1Q9BTV5 496 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 HMG20BQ9P0W2 317 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 PCDHB13Q9Y5F0 798 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 MAP3K15Q6ZN16 1313 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 ABCC12Q96J65 1359 aa10.76□□□□□ -0.69
TREM1-202ENST00000334475 EYA2O00167 538 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 ZKSCAN1P17029 563 aaPredicted RBP10.75□□□□□ -0.69
TREM1-202ENST00000334475 PSMA5P28066 241 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 TFCP2Q12800 502 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 NMIQ13287 307 aaPredicted RBP10.75□□□□□ -0.69
TREM1-202ENST00000334475 NECTIN1Q15223 517 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 VPS53Q5VIR6 699 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 COL23A1Q86Y22 540 aaPredicted RBP10.75□□□□□ -0.69
TREM1-202ENST00000334475 DNAJC10Q8IXB1 793 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 SPOCK2Q92563 424 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 MAP4K1Q92918 833 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 ZSCAN31Q96LW9 406 aaPredicted RBP10.75□□□□□ -0.69
TREM1-202ENST00000334475 HAUS7Q99871 368 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 ZBTB3Q9H5J0 574 aa10.75□□□□□ -0.69
TREM1-202ENST00000334475 DBNLQ9UJU6 430 aaKnown RBP10.75□□□□□ -0.69
TREM1-202ENST00000334475 MYH7P12883 1935 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 FSD2A1L4K1 749 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 TIE1P35590 1138 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 PRIM1P49642 420 aaKnown RBP10.74□□□□□ -0.69
TREM1-202ENST00000334475 KLHL40Q2TBA0 621 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 TSGA10IPQ3SY00 556 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 MSL1Q68DK7 614 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 GIGYF2Q6Y7W6 1299 aaKnown RBP10.74□□□□□ -0.69
TREM1-202ENST00000334475 KLHDC4Q8TBB5 520 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 ALDH8A1Q9H2A2 487 aaPredicted RBP10.74□□□□□ -0.69
TREM1-202ENST00000334475 BOLA2Q9H3K6 86 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 ZSWIM6Q9HCJ5 1215 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 SH2B1Q9NRF2 756 aaPredicted RBP10.74□□□□□ -0.69
TREM1-202ENST00000334475 TLR7Q9NYK1 1049 aaKnown RBP10.74□□□□□ -0.69
TREM1-202ENST00000334475 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.74□□□□□ -0.69
TREM1-202ENST00000334475 ARAP2Q8WZ64 1704 aa10.74□□□□□ -0.69
TREM1-202ENST00000334475 RPAP1Q9BWH6 1393 aaPredicted RBP10.74□□□□□ -0.69
TREM1-202ENST00000334475 KAT6BQ8WYB5 2073 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 GOLGA6L3A6NEY3 463 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 ERVV-1B6SEH8 477 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 BRD1O95696 1058 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 IL6STP40189 918 aaPredicted RBP10.73□□□□□ -0.69
TREM1-202ENST00000334475 KRT32Q14532 448 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 LRRFIP1Q32MZ4 808 aaKnown RBP10.73□□□□□ -0.69
TREM1-202ENST00000334475 ATG9AQ7Z3C6 839 aa10.73□□□□□ -0.69
TREM1-202ENST00000334475 ZGPATQ8N5A5 531 aaKnown RBP10.73□□□□□ -0.69
TREM1-202ENST00000334475 ZBTB38Q8NAP3 1195 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms