RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 MASTLQ96GX5 879 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 TLR7Q9NYK1 1049 aaKnown RBP20.48■□□□□ 0.87
SHOX-201ENST00000334060 A0A1B0GUL6 1792 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 DLEC1Q9Y238 1755 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 NPR1P16066 1061 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 KLRK1P26718 216 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 TSHZ3Q63HK5 1081 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 PRPF40BQ6NWY9 871 aaKnown RBP20.48■□□□□ 0.87
SHOX-201ENST00000334060 RBM17Q96I25 401 aaKnown RBP20.48■□□□□ 0.87
SHOX-201ENST00000334060 LNPKQ9C0E8 428 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 CNNM1Q9NRU3 951 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 PDZRN3Q9UPQ7 1066 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 HDAC5Q9UQL6 1122 aa20.48■□□□□ 0.87
SHOX-201ENST00000334060 PDE4AP27815 886 aa20.47■□□□□ 0.87
SHOX-201ENST00000334060 OS9Q13438 667 aaPredicted RBP20.47■□□□□ 0.87
SHOX-201ENST00000334060 ANKRD45Q5TZF3 282 aa20.47■□□□□ 0.87
SHOX-201ENST00000334060 VGLL2Q8N8G2 317 aa20.47■□□□□ 0.87
SHOX-201ENST00000334060 RHPN1Q8TCX5 695 aa20.47■□□□□ 0.87
SHOX-201ENST00000334060 MINPP1Q9UNW1 487 aa20.47■□□□□ 0.87
SHOX-201ENST00000334060 CHRNDQ07001 517 aa20.46■□□□□ 0.87
SHOX-201ENST00000334060 MPHOSPH8Q99549 860 aa20.46■□□□□ 0.87
SHOX-201ENST00000334060 CDC5LQ99459 802 aaKnown RBP20.46■□□□□ 0.87
SHOX-201ENST00000334060 PPEF1O14829 653 aaPredicted RBP20.45■□□□□ 0.86
SHOX-201ENST00000334060 IGHMBP2P38935 993 aaKnown RBP20.45■□□□□ 0.86
SHOX-201ENST00000334060 CRAMP1Q96RY5 1269 aa20.45■□□□□ 0.86
SHOX-201ENST00000334060 BRCA1P38398 1863 aaKnown RBP20.45■□□□□ 0.86
SHOX-201ENST00000334060 HSP90B1P14625 803 aaKnown RBP20.45■□□□□ 0.86
SHOX-201ENST00000334060 G3BP1Q13283 466 aaKnown RBP eCLIP20.45■□□□□ 0.86
SHOX-201ENST00000334060 EAF2Q96CJ1 260 aaPredicted RBP20.45■□□□□ 0.86
SHOX-201ENST00000334060 SYT17Q9BSW7 474 aa20.45■□□□□ 0.86
SHOX-201ENST00000334060 BSDC1Q9NW68 430 aaPredicted RBP20.45■□□□□ 0.86
SHOX-201ENST00000334060 C21orf2O43822 256 aa20.44■□□□□ 0.86
SHOX-201ENST00000334060 TIMM10P62072 90 aa20.44■□□□□ 0.86
SHOX-201ENST00000334060 GPSM2P81274 684 aa20.44■□□□□ 0.86
SHOX-201ENST00000334060 ADORA1P30542 326 aa20.43■□□□□ 0.86
SHOX-201ENST00000334060 METTL24Q5JXM2 366 aa20.43■□□□□ 0.86
SHOX-201ENST00000334060 STYK1Q6J9G0 422 aa20.43■□□□□ 0.86
SHOX-201ENST00000334060 CENPQQ7L2Z9 268 aaPredicted RBP20.43■□□□□ 0.86
SHOX-201ENST00000334060 CCDC8Q9H0W5 538 aaPredicted RBP20.43■□□□□ 0.86
SHOX-201ENST00000334060 CD2APQ9Y5K6 639 aa20.43■□□□□ 0.86
SHOX-201ENST00000334060 DUOX1Q9NRD9 1551 aa20.43■□□□□ 0.86
SHOX-201ENST00000334060 NUCB1Q02818 461 aa20.43■□□□□ 0.86
SHOX-201ENST00000334060 TXNRD3Q86VQ6 643 aa20.43■□□□□ 0.86
SHOX-201ENST00000334060 C7orf43Q8WVR3 580 aa20.43■□□□□ 0.86
SHOX-201ENST00000334060 LRRC37AA6NMS7 1700 aa20.42■□□□□ 0.86
SHOX-201ENST00000334060 CIAO1O76071 339 aa20.41■□□□□ 0.86
SHOX-201ENST00000334060 IL15P40933 162 aaPredicted RBP20.41■□□□□ 0.86
SHOX-201ENST00000334060 TGFB2P61812 414 aa20.41■□□□□ 0.86
SHOX-201ENST00000334060 GCC1Q96CN9 775 aa20.41■□□□□ 0.86
SHOX-201ENST00000334060 LRRCC1Q9C099 1032 aa20.41■□□□□ 0.86
SHOX-201ENST00000334060 LTBP1Q14766 1721 aa20.41■□□□□ 0.86
SHOX-201ENST00000334060 SNED1Q8TER0 1413 aa20.41■□□□□ 0.86
SHOX-201ENST00000334060 CHD1LQ86WJ1 897 aa20.41■□□□□ 0.86
SHOX-201ENST00000334060 NSFL1CQ9UNZ2 370 aaKnown RBP20.4■□□□□ 0.86
SHOX-201ENST00000334060 ZNF609O15014 1411 aa20.4■□□□□ 0.86
SHOX-201ENST00000334060 TNNI3KQ59H18 835 aa20.39■□□□□ 0.86
SHOX-201ENST00000334060 TTLL6Q8N841 843 aa20.39■□□□□ 0.86
SHOX-201ENST00000334060 DBNDD2Q9BQY9 259 aa20.39■□□□□ 0.86
SHOX-201ENST00000334060 POLLQ9UGP5 575 aa20.39■□□□□ 0.86
SHOX-201ENST00000334060 BCS1LQ9Y276 419 aa20.39■□□□□ 0.86
SHOX-201ENST00000334060 ATP6V0A2Q9Y487 856 aa20.39■□□□□ 0.86
SHOX-201ENST00000334060 FPGT-TNNI3KV9GXZ4 949 aa20.39■□□□□ 0.86
SHOX-201ENST00000334060 PDE8BO95263 885 aa20.39■□□□□ 0.85
SHOX-201ENST00000334060 AACSQ86V21 672 aa20.39■□□□□ 0.85
SHOX-201ENST00000334060 KIF1BPQ96EK5 621 aa20.39■□□□□ 0.85
SHOX-201ENST00000334060 DBNLQ9UJU6 430 aaKnown RBP20.39■□□□□ 0.85
SHOX-201ENST00000334060 NDUFB9Q9Y6M9 179 aa20.39■□□□□ 0.85
SHOX-201ENST00000334060 A0A1B0GUL7 405 aa20.38■□□□□ 0.85
SHOX-201ENST00000334060 ALDH1B1P30837 517 aa20.38■□□□□ 0.85
SHOX-201ENST00000334060 RGS3P49796 1198 aa20.38■□□□□ 0.85
SHOX-201ENST00000334060 PIM2Q9P1W9 311 aa20.38■□□□□ 0.85
SHOX-201ENST00000334060 BBOX1O75936 387 aa20.37■□□□□ 0.85
SHOX-201ENST00000334060 FGFR2P21802 821 aa20.37■□□□□ 0.85
SHOX-201ENST00000334060 ANKIB1Q9P2G1 1089 aa20.37■□□□□ 0.85
SHOX-201ENST00000334060 CEP126Q9P2H0 1117 aa20.37■□□□□ 0.85
SHOX-201ENST00000334060 CNKSR1Q969H4 720 aa20.37■□□□□ 0.85
SHOX-201ENST00000334060 NEUROD6Q96NK8 337 aa20.37■□□□□ 0.85
SHOX-201ENST00000334060 MROH5Q6ZUA9 1318 aa20.36■□□□□ 0.85
SHOX-201ENST00000334060 SALL3Q9BXA9 1300 aa20.36■□□□□ 0.85
SHOX-201ENST00000334060 RAB11FIP3O75154 756 aa20.36■□□□□ 0.85
SHOX-201ENST00000334060 YBX3P16989 372 aaKnown RBP eCLIP20.36■□□□□ 0.85
SHOX-201ENST00000334060 SP8Q8IXZ3 490 aa20.36■□□□□ 0.85
SHOX-201ENST00000334060 IRS2Q9Y4H2 1338 aa20.36■□□□□ 0.85
SHOX-201ENST00000334060 PRELPP51888 382 aa20.35■□□□□ 0.85
SHOX-201ENST00000334060 GYG1P46976 350 aa20.35■□□□□ 0.85
SHOX-201ENST00000334060 ATP2B3Q16720 1220 aa20.35■□□□□ 0.85
SHOX-201ENST00000334060 IQSEC3Q9UPP2 1182 aaPredicted RBP20.35■□□□□ 0.85
SHOX-201ENST00000334060 COL4A5P29400 1685 aa20.34■□□□□ 0.85
SHOX-201ENST00000334060 UFL1O94874 794 aa20.34■□□□□ 0.85
SHOX-201ENST00000334060 DALRD3Q5D0E6 543 aaKnown RBP20.34■□□□□ 0.85
SHOX-201ENST00000334060 PI16Q6UXB8 463 aa20.34■□□□□ 0.85
SHOX-201ENST00000334060 TBC1D16Q8TBP0 767 aa20.34■□□□□ 0.85
SHOX-201ENST00000334060 BCAMP50895 628 aa20.34■□□□□ 0.85
SHOX-201ENST00000334060 SCARF1Q14162 830 aa20.34■□□□□ 0.85
SHOX-201ENST00000334060 XAGE2Q96GT9 111 aa20.34■□□□□ 0.85
SHOX-201ENST00000334060 RIMBP2O15034 1052 aa20.33■□□□□ 0.84
SHOX-201ENST00000334060 RASSF7Q02833 373 aa20.33■□□□□ 0.84
SHOX-201ENST00000334060 HSP90AB4PQ58FF6 505 aa20.33■□□□□ 0.84
SHOX-201ENST00000334060 ERC1Q8IUD2 1116 aa20.33■□□□□ 0.84
SHOX-201ENST00000334060 PLEKHM2Q8IWE5 1019 aa20.33■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms