RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 NECAB1Q8N987 351 aa20.76■□□□□ 0.91
DDX28-201ENST00000332395 TCEANC2Q96MN5 208 aa20.76■□□□□ 0.91
DDX28-201ENST00000332395 TMEM63CQ9P1W3 806 aa20.76■□□□□ 0.91
DDX28-201ENST00000332395 SPEF2Q9C093 1822 aa20.76■□□□□ 0.91
DDX28-201ENST00000332395 IFIT5Q13325 482 aaKnown RBP20.75■□□□□ 0.91
DDX28-201ENST00000332395 ANKRD36CQ5JPF3 1778 aa20.75■□□□□ 0.91
DDX28-201ENST00000332395 DOT1LQ8TEK3 1739 aa20.75■□□□□ 0.91
DDX28-201ENST00000332395 PRIM1P49642 420 aaKnown RBP20.75■□□□□ 0.91
DDX28-201ENST00000332395 TAF7LQ5H9L4 462 aa20.75■□□□□ 0.91
DDX28-201ENST00000332395 SYNE4Q8N205 404 aa20.75■□□□□ 0.91
DDX28-201ENST00000332395 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.75■□□□□ 0.91
DDX28-201ENST00000332395 GDPD2Q9HCC8 539 aa20.75■□□□□ 0.91
DDX28-201ENST00000332395 HELLSQ9NRZ9 838 aa20.75■□□□□ 0.91
DDX28-201ENST00000332395 AKAP2Q9Y2D5 859 aa20.75■□□□□ 0.91
DDX28-201ENST00000332395 F13A1P00488 732 aa20.74■□□□□ 0.91
DDX28-201ENST00000332395 TOB2Q14106 344 aaPredicted RBP20.74■□□□□ 0.91
DDX28-201ENST00000332395 TCHHQ07283 1943 aa20.73■□□□□ 0.91
DDX28-201ENST00000332395 CYP21A2P08686 494 aa20.73■□□□□ 0.91
DDX28-201ENST00000332395 SLFNL1Q499Z3 407 aa20.73■□□□□ 0.91
DDX28-201ENST00000332395 ZMYM1Q5SVZ6 1142 aa20.73■□□□□ 0.91
DDX28-201ENST00000332395 USP48Q86UV5 1035 aa20.73■□□□□ 0.91
DDX28-201ENST00000332395 NEK1Q96PY6 1258 aa20.73■□□□□ 0.91
DDX28-201ENST00000332395 DTNBO60941 627 aa20.72■□□□□ 0.91
DDX28-201ENST00000332395 NASPP49321 788 aaPredicted RBP20.72■□□□□ 0.91
DDX28-201ENST00000332395 CCDC158Q5M9N0 1113 aa20.72■□□□□ 0.91
DDX28-201ENST00000332395 TMEM87AQ8NBN3 555 aa20.72■□□□□ 0.91
DDX28-201ENST00000332395 XAGE2Q96GT9 111 aa20.72■□□□□ 0.91
DDX28-201ENST00000332395 CDCA7Q9BWT1 371 aaPredicted RBP20.72■□□□□ 0.91
DDX28-201ENST00000332395 ADAMTS2O95450 1211 aa20.72■□□□□ 0.91
DDX28-201ENST00000332395 ADORA1P30542 326 aa20.72■□□□□ 0.91
DDX28-201ENST00000332395 MTMR6Q9Y217 621 aa20.72■□□□□ 0.91
DDX28-201ENST00000332395 ATP6V1DQ9Y5K8 247 aa20.72■□□□□ 0.91
DDX28-201ENST00000332395 IL6STP40189 918 aaPredicted RBP20.71■□□□□ 0.91
DDX28-201ENST00000332395 GORABQ5T7V8 394 aa20.71■□□□□ 0.91
DDX28-201ENST00000332395 TTLL11Q8NHH1 800 aa20.71■□□□□ 0.91
DDX28-201ENST00000332395 NUP98P52948 1817 aa20.71■□□□□ 0.91
DDX28-201ENST00000332395 SPATA31A1Q5TZJ5 1347 aa20.71■□□□□ 0.91
DDX28-201ENST00000332395 NRAPQ86VF7 1730 aa20.71■□□□□ 0.91
DDX28-201ENST00000332395 RNF113AO15541 343 aaKnown RBP20.7■□□□□ 0.91
DDX28-201ENST00000332395 GADD45BO75293 160 aaPredicted RBP20.7■□□□□ 0.91
DDX28-201ENST00000332395 TTC39AQ5SRH9 613 aa20.7■□□□□ 0.91
DDX28-201ENST00000332395 DSCC1Q9BVC3 393 aa20.7■□□□□ 0.91
DDX28-201ENST00000332395 CNPY2Q9Y2B0 182 aa20.7■□□□□ 0.91
DDX28-201ENST00000332395 RIC1Q4ADV7 1423 aa20.7■□□□□ 0.9
DDX28-201ENST00000332395 ERVV-1B6SEH8 477 aa20.7■□□□□ 0.9
DDX28-201ENST00000332395 ITGA6P23229 1130 aa20.7■□□□□ 0.9
DDX28-201ENST00000332395 CTSWP56202 376 aa20.7■□□□□ 0.9
DDX28-201ENST00000332395 DZIP3Q86Y13 1208 aaKnown RBP20.7■□□□□ 0.9
DDX28-201ENST00000332395 GREM2Q9H772 168 aa20.7■□□□□ 0.9
DDX28-201ENST00000332395 MYH3P11055 1940 aa20.69■□□□□ 0.9
DDX28-201ENST00000332395 SYCE3A1L190 88 aa20.69■□□□□ 0.9
DDX28-201ENST00000332395 IRS4O14654 1257 aaPredicted RBP20.69■□□□□ 0.9
DDX28-201ENST00000332395 FKBP4Q02790 459 aaKnown RBP eCLIP20.69■□□□□ 0.9
DDX28-201ENST00000332395 DDB1Q16531 1140 aa20.69■□□□□ 0.9
DDX28-201ENST00000332395 TRMT112Q9UI30 125 aaKnown RBP20.69■□□□□ 0.9
DDX28-201ENST00000332395 TBC1D2BQ9UPU7 963 aa20.69■□□□□ 0.9
DDX28-201ENST00000332395 MAST3O60307 1309 aa20.69■□□□□ 0.9
DDX28-201ENST00000332395 THRAP3Q9Y2W1 955 aaKnown RBP20.69■□□□□ 0.9
DDX28-201ENST00000332395 RIPOR2Q9Y4F9 1068 aa20.69■□□□□ 0.9
DDX28-201ENST00000332395 LRSAM1Q6UWE0 723 aa20.68■□□□□ 0.9
DDX28-201ENST00000332395 PHLPP1O60346 1717 aa20.68■□□□□ 0.9
DDX28-201ENST00000332395 VPS37CA5D8V6 355 aaPredicted RBP20.68■□□□□ 0.9
DDX28-201ENST00000332395 METTL24Q5JXM2 366 aa20.68■□□□□ 0.9
DDX28-201ENST00000332395 LDHAL6AQ6ZMR3 332 aa20.68■□□□□ 0.9
DDX28-201ENST00000332395 SYAP1Q96A49 352 aaPredicted RBP20.68■□□□□ 0.9
DDX28-201ENST00000332395 NAP1L5Q96NT1 182 aaPredicted RBP20.68■□□□□ 0.9
DDX28-201ENST00000332395 LTBP4Q8N2S1 1624 aa20.67■□□□□ 0.9
DDX28-201ENST00000332395 ANKRD18BA2A2Z9 1011 aa20.67■□□□□ 0.9
DDX28-201ENST00000332395 HSPD1P10809 573 aaKnown RBP20.67■□□□□ 0.9
DDX28-201ENST00000332395 PDIA4P13667 645 aaKnown RBP20.67■□□□□ 0.9
DDX28-201ENST00000332395 LARP1BQ659C4 914 aaKnown RBP20.67■□□□□ 0.9
DDX28-201ENST00000332395 STOX1Q6ZVD7 989 aa20.67■□□□□ 0.9
DDX28-201ENST00000332395 UBN2Q6ZU65 1347 aa20.67■□□□□ 0.9
DDX28-201ENST00000332395 STK3Q13188 491 aa20.66■□□□□ 0.9
DDX28-201ENST00000332395 ATP2B3Q16720 1220 aa20.66■□□□□ 0.9
DDX28-201ENST00000332395 Q6ZUG5 572 aa20.66■□□□□ 0.9
DDX28-201ENST00000332395 RBSNQ9H1K0 784 aa20.66■□□□□ 0.9
DDX28-201ENST00000332395 PDCP20941 246 aa20.66■□□□□ 0.9
DDX28-201ENST00000332395 SCARF1Q14162 830 aa20.66■□□□□ 0.9
DDX28-201ENST00000332395 LRRFIP1Q32MZ4 808 aaKnown RBP20.66■□□□□ 0.9
DDX28-201ENST00000332395 ABCC12Q96J65 1359 aa20.66■□□□□ 0.9
DDX28-201ENST00000332395 LAMA4Q16363 1823 aa20.65■□□□□ 0.9
DDX28-201ENST00000332395 A0A0G2JS52 829 aa20.65■□□□□ 0.9
DDX28-201ENST00000332395 M0R2C6 588 aa20.65■□□□□ 0.9
DDX28-201ENST00000332395 PDE8AO60658 829 aa20.65■□□□□ 0.9
DDX28-201ENST00000332395 HMGB1P09429 215 aaKnown RBP20.65■□□□□ 0.9
DDX28-201ENST00000332395 ZNF34Q8IZ26 560 aa20.65■□□□□ 0.9
DDX28-201ENST00000332395 CNNM1Q9NRU3 951 aa20.65■□□□□ 0.9
DDX28-201ENST00000332395 FIBPO43427 364 aa20.65■□□□□ 0.9
DDX28-201ENST00000332395 ANP32BQ92688 251 aaKnown RBP20.65■□□□□ 0.9
DDX28-201ENST00000332395 GTF3C6Q969F1 213 aa20.65■□□□□ 0.9
DDX28-201ENST00000332395 OSBP2Q969R2 916 aa20.65■□□□□ 0.9
DDX28-201ENST00000332395 ZFYP08048 801 aaPredicted RBP20.64■□□□□ 0.89
DDX28-201ENST00000332395 EIF5P55010 431 aaKnown RBP20.64■□□□□ 0.89
DDX28-201ENST00000332395 DNM1Q05193 864 aaKnown RBP20.64■□□□□ 0.89
DDX28-201ENST00000332395 CCDC173Q0VFZ6 552 aa20.64■□□□□ 0.89
DDX28-201ENST00000332395 ACSBG1Q96GR2 724 aa20.64■□□□□ 0.89
DDX28-201ENST00000332395 ZAP70P43403 619 aa20.63■□□□□ 0.89
DDX28-201ENST00000332395 UBE2HP62256 183 aa20.63■□□□□ 0.89
DDX28-201ENST00000332395 INTS5Q6P9B9 1019 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms